Protein–RNA interactions for Protein: Q8C0C4

Ccser1, Serine-rich coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccser1Q8C0C4 Gm25239-201ENSMUST00000174915 86 ntBASIC41.09■■■■■ 4.17
Ccser1Q8C0C4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.88■■■■□ 3.65
Ccser1Q8C0C4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
Ccser1Q8C0C4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Ccser1Q8C0C4 Gm15042-201ENSMUST00000120212 883 ntBASIC36.13■■■■□ 3.37
Ccser1Q8C0C4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Ccser1Q8C0C4 Gm24109-201ENSMUST00000175489 103 ntBASIC35.52■■■■□ 3.28
Ccser1Q8C0C4 Gm15045-201ENSMUST00000117359 883 ntBASIC35.41■■■■□ 3.26
Ccser1Q8C0C4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.41■■■■□ 3.26
Ccser1Q8C0C4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Ccser1Q8C0C4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.66■■■■□ 3.14
Ccser1Q8C0C4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Ccser1Q8C0C4 Gm23366-201ENSMUST00000175022 89 ntBASIC34.32■■■■□ 3.08
Ccser1Q8C0C4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
Ccser1Q8C0C4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Ccser1Q8C0C4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.01■■■■□ 3.04
Ccser1Q8C0C4 Psd-208ENSMUST00000224556 2034 ntBASIC33.85■■■■□ 3.01
Ccser1Q8C0C4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
Ccser1Q8C0C4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
Ccser1Q8C0C4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Ccser1Q8C0C4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.61■■■□□ 2.97
Ccser1Q8C0C4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Ccser1Q8C0C4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.44■■■□□ 2.94
Ccser1Q8C0C4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.36■■■□□ 2.93
Ccser1Q8C0C4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.31■■■□□ 2.92
Ccser1Q8C0C4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Ccser1Q8C0C4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.22■■■□□ 2.91
Ccser1Q8C0C4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.17■■■□□ 2.9
Ccser1Q8C0C4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Ccser1Q8C0C4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.87■■■□□ 2.85
Ccser1Q8C0C4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Ccser1Q8C0C4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Ccser1Q8C0C4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.7■■■□□ 2.82
Ccser1Q8C0C4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.58■■■□□ 2.81
Ccser1Q8C0C4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ccser1Q8C0C4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Ccser1Q8C0C4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Ccser1Q8C0C4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Ccser1Q8C0C4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ccser1Q8C0C4 Gm25238-201ENSMUST00000174914 89 ntBASIC32.37■■■□□ 2.77
Ccser1Q8C0C4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.26■■■□□ 2.75
Ccser1Q8C0C4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ccser1Q8C0C4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.08■■■□□ 2.73
Ccser1Q8C0C4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Ccser1Q8C0C4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ccser1Q8C0C4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccser1Q8C0C4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ccser1Q8C0C4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ccser1Q8C0C4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.86■■■□□ 2.69
Ccser1Q8C0C4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ccser1Q8C0C4 Gm27325-201ENSMUST00000175467 74 ntBASIC31.72■■■□□ 2.67
Ccser1Q8C0C4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.72■■■□□ 2.67
Ccser1Q8C0C4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.71■■■□□ 2.67
Ccser1Q8C0C4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Ccser1Q8C0C4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Ccser1Q8C0C4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Ccser1Q8C0C4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ccser1Q8C0C4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ccser1Q8C0C4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.44■■■□□ 2.62
Ccser1Q8C0C4 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.43■■■□□ 2.62
Ccser1Q8C0C4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Ccser1Q8C0C4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.37■■■□□ 2.61
Ccser1Q8C0C4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.33■■■□□ 2.61
Ccser1Q8C0C4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccser1Q8C0C4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.3■■■□□ 2.6
Ccser1Q8C0C4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccser1Q8C0C4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Ccser1Q8C0C4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Ccser1Q8C0C4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ccser1Q8C0C4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
Ccser1Q8C0C4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
Ccser1Q8C0C4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ccser1Q8C0C4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ccser1Q8C0C4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.01■■■□□ 2.55
Ccser1Q8C0C4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ccser1Q8C0C4 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.96■■■□□ 2.55
Ccser1Q8C0C4 Rab21-202ENSMUST00000218831 843 ntBASIC30.96■■■□□ 2.55
Ccser1Q8C0C4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Ccser1Q8C0C4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.91■■■□□ 2.54
Ccser1Q8C0C4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Ccser1Q8C0C4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Ccser1Q8C0C4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ccser1Q8C0C4 Gm25262-201ENSMUST00000174934 133 ntBASIC30.83■■■□□ 2.53
Ccser1Q8C0C4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.83■■■□□ 2.53
Ccser1Q8C0C4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
Ccser1Q8C0C4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Ccser1Q8C0C4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Ccser1Q8C0C4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Ccser1Q8C0C4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.59■■■□□ 2.49
Ccser1Q8C0C4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.56■■■□□ 2.48
Ccser1Q8C0C4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ccser1Q8C0C4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Ccser1Q8C0C4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ccser1Q8C0C4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Ccser1Q8C0C4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ccser1Q8C0C4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ccser1Q8C0C4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ccser1Q8C0C4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Ccser1Q8C0C4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccser1Q8C0C4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.3■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms