RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	BUD22	Q04347	519 aa	Known RBP	3.39	□□□□□ -1.87
VAM10	YOR068C	URC2	Q04411	772 aa		3.39	□□□□□ -1.87
VAM10	YOR068C	GTO3	Q04806	366 aa		3.39	□□□□□ -1.87
VAM10	YOR068C	DON1	Q05610	365 aa		3.39	□□□□□ -1.87
VAM10	YOR068C	BOP2	Q06150	570 aa		3.39	□□□□□ -1.87
VAM10	YOR068C	ATG17	Q06410	417 aa		3.39	□□□□□ -1.87
VAM10	YOR068C	RAD34	Q06665	692 aa		3.39	□□□□□ -1.87
VAM10	YOR068C	MED4	Q12343	284 aa		3.39	□□□□□ -1.87
VAM10	YOR068C	LSO2	Q3E772	92 aa	Known RBP	3.39	□□□□□ -1.87
VAM10	YOR068C	LAG2	Q92325	660 aa		3.39	□□□□□ -1.87
VAM10	YOR068C	RTC1	Q08281	1341 aa		3.39	□□□□□ -1.87
VAM10	YOR068C	CDC36	P06100	191 aa	Predicted RBP	3.38	□□□□□ -1.87
VAM10	YOR068C	PRB1	P09232	635 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	UNG1	P12887	359 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.38	□□□□□ -1.87	not detected
VAM10	YOR068C	DPB2	P24482	689 aa	Predicted RBP	3.38	□□□□□ -1.87
VAM10	YOR068C	LAC1	P28496	418 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	TPS2	P31688	896 aa	Known RBP	3.38	□□□□□ -1.87
VAM10	YOR068C	ATP11	P32453	318 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	SOF1	P33750	489 aa	Known RBP	3.38	□□□□□ -1.87
VAM10	YOR068C	CPR5	P35176	225 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	KKQ8	P36004	724 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	LHS1	P36016	881 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	MRPL37	P36532	105 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	NTC20	P38302	140 aa	Predicted RBP	3.38	□□□□□ -1.87
VAM10	YOR068C	VBA2	P38358	474 aa	Known RBP	3.38	□□□□□ -1.87
VAM10	YOR068C	RFC3	P38629	340 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	WSS1	P38838	269 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	JHD1	P40034	492 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	PHB1	P40961	287 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	FET5	P43561	622 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	DLD2	P46681	530 aa	Known RBP	3.38	□□□□□ -1.87
VAM10	YOR068C	GCD14	P46959	383 aa	Predicted RBP	3.38	□□□□□ -1.87
VAM10	YOR068C	EMC2	P47133	292 aa	Known RBP	3.38	□□□□□ -1.87
VAM10	YOR068C	MRX6	P48564	524 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	HSH155	P49955	971 aa	Known RBP	3.38	□□□□□ -1.87
VAM10	YOR068C	PIB2	P53191	635 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	CAF130	P53280	1122 aa	Predicted RBP	3.38	□□□□□ -1.87
VAM10	YOR068C	KTR6	P54070	446 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	YAT1	P80235	687 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	SEG1	Q04279	960 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	MRPL1	Q04599	285 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	RTT103	Q05543	409 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	PDR8	Q06149	701 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	YLR455W	Q06188	304 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	SEC10	Q06245	871 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	DIB1	Q06819	143 aa	Predicted RBP	3.38	□□□□□ -1.87
VAM10	YOR068C	DNL4	Q08387	944 aa	Predicted RBP	3.38	□□□□□ -1.87
VAM10	YOR068C	SPE3	Q12074	293 aa	Known RBP	3.38	□□□□□ -1.87
VAM10	YOR068C	GIS3	Q12418	502 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	YRF1-4	O13559	1382 aa		3.38	□□□□□ -1.87
VAM10	YOR068C	CFT1	Q06632	1357 aa	Known RBP	3.38	□□□□□ -1.87
VAM10	YOR068C	HXK2	P04807	486 aa	Known RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	ARG81	P05085	880 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	RPL6B	P05739	176 aa	Known RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	ILV2	P07342	687 aa	Known RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	EST1	P17214	699 aa	Predicted RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	PRP2	P20095	876 aa	Predicted RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	SPE2	P21182	396 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	DAL81	P21657	970 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	CLB1	P24868	471 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	CLB3	P24870	427 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	GEX1	P25596	615 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	ERG1	P32476	496 aa	Known RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	NUF2	P33895	451 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	HES1	P35843	434 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	STB6	P36085	766 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	VPS51	P36116	164 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	GDT1	P38301	280 aa	Predicted RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	YHR054C	P38780	354 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	LIN1	P38852	340 aa	Predicted RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	YHR182W	P38870	785 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	RGI2	P40188	164 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	ASG1	P40467	964 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	EFM4	P40516	257 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	AGE2	P40529	298 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	MSS2	P40990	351 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	ALK1	P43633	760 aa	Known RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	MNT4	P53745	580 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	IST1	P53843	298 aa	Predicted RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	PDR16	P53860	351 aa	Known RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	INN1	P53901	409 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	RPL6A	Q02326	176 aa	Known RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	RLI1	Q03195	608 aa	Known RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	GIM5	Q04493	163 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	VPS74	Q06385	345 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	PML1	Q07930	204 aa	Predicted RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	ABP140	Q08641	628 aa	Known RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	RIM20	Q12033	661 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	RDL1	Q12305	139 aa	Known RBP	3.37	□□□□□ -1.87
VAM10	YOR068C	GPM3	Q12326	303 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	LDB17	Q12342	491 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	YLR111W	Q12528	110 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	YJR112W-A	Q3E743	109 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	YML133C	Q03099	1374 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	YLL066C	Q99208	1374 aa		3.37	□□□□□ -1.87
VAM10	YOR068C	ECM5	Q03214	1411 aa		3.36	□□□□□ -1.87
VAM10	YOR068C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.36	□□□□□ -1.87	not detected
VAM10	YOR068C	ERG11	P10614	530 aa		3.36	□□□□□ -1.87
VAM10	YOR068C	GCD2	P12754	651 aa	Predicted RBP	3.36	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms