RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	SYN8	P31377	255 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	PIM1	P36775	1133 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	BNA4	P38169	460 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	PSY4	P38193	441 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	YNG2	P38806	282 aa	Known RBP	0.41	□□□□□ -2.34
RCO1	YMR075W	FAU1	P40099	211 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	POP1	P41812	875 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	PIL1	P53252	339 aa	Known RBP	0.41	□□□□□ -2.34
RCO1	YMR075W	GPI1	P53306	609 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	OGG1	P53397	376 aa	Predicted RBP	0.41	□□□□□ -2.34
RCO1	YMR075W	TOF1	P53840	1238 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	IBD2	P53892	351 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	YMR010W	Q03687	405 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	RCO1	Q04779	684 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	HRI1	Q05905	244 aa	Known RBP	0.41	□□□□□ -2.34
RCO1	YMR075W	RTT109	Q07794	436 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	REX4	Q08237	289 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	SSP2	Q08646	371 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	FMP40	Q08968	688 aa	Predicted RBP	0.41	□□□□□ -2.34
RCO1	YMR075W	THP3	Q12049	470 aa	Known RBP	0.41	□□□□□ -2.34
RCO1	YMR075W	CFT2	Q12102	859 aa	Predicted RBP	0.41	□□□□□ -2.34
RCO1	YMR075W	YLR108C	Q12259	485 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	RKM5	Q12367	367 aa		0.41	□□□□□ -2.34
RCO1	YMR075W	HSH49	Q99181	213 aa	Predicted RBP	0.41	□□□□□ -2.34
RCO1	YMR075W	YML133C	Q03099	1374 aa		0.4	□□□□□ -2.34
RCO1	YMR075W	YLL067C	Q07888	1374 aa		0.4	□□□□□ -2.34
RCO1	YMR075W	YLL066C	Q99208	1374 aa		0.4	□□□□□ -2.34
RCO1	YMR075W	SAM1	P10659	382 aa	Known RBP	0.4	□□□□□ -2.35
RCO1	YMR075W	MRP13	P12686	339 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	AMD1	P15274	810 aa	Known RBP	0.4	□□□□□ -2.35
RCO1	YMR075W	HEM15	P16622	393 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	SPO7	P18410	259 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	SAM2	P19358	384 aa	Known RBP	0.4	□□□□□ -2.35
RCO1	YMR075W	CLN1	P20437	546 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	BUD5	P25300	642 aa	Predicted RBP	0.4	□□□□□ -2.35
RCO1	YMR075W	YCR007C	P25354	239 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	SPS22	P25380	463 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	YIH1	P25637	258 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	PEP3	P27801	918 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	PDB1	P32473	366 aa	Known RBP	0.4	□□□□□ -2.35
RCO1	YMR075W	SHP1	P34223	423 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	SEF1	P34228	1148 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	FRE2	P36033	711 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	ARA1	P38115	344 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	REG2	P38232	338 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	HAT2	P39984	401 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	ISC1	P40015	477 aa	Known RBP	0.4	□□□□□ -2.35
RCO1	YMR075W	ALG5	P40350	334 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	DFG10	P40526	253 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	SAP185	P40856	1058 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	LYS14	P40971	790 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	OST1	P41543	476 aa	Known RBP	0.4	□□□□□ -2.35
RCO1	YMR075W	BNA1	P47096	177 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	CAF130	P53280	1122 aa	Predicted RBP	0.4	□□□□□ -2.35
RCO1	YMR075W	ZPR1	P53303	486 aa	Known RBP	0.4	□□□□□ -2.35
RCO1	YMR075W	MKC7	P53379	596 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	DSL1	P53847	754 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	MSC1	Q03104	513 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	HER2	Q03557	464 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	ECM11	Q04110	302 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	LUC7	Q07508	261 aa	Predicted RBP	0.4	□□□□□ -2.35
RCO1	YMR075W	CTI6	Q08923	506 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	RFM1	Q12192	310 aa		0.4	□□□□□ -2.35
RCO1	YMR075W	HTZ1	Q12692	134 aa	Known RBP	0.4	□□□□□ -2.35
RCO1	YMR075W	LEU4	P06208	619 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	HIP1	P06775	603 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	SEC53	P07283	254 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	PUP3	P25451	205 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	CDC60	P26637	1090 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	NDI1	P32340	513 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	KKQ8	P36004	724 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	AUR1	P36107	401 aa	Predicted RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	NUP133	P36161	1157 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	RCK2	P38623	610 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	YER010C	P40011	234 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	LAM5	P43560	674 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	RMD8	P43620	662 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	ARC1	P46672	376 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	YJR154W	P47181	346 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	AAD10	P47182	288 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	RMD9	P53140	646 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	YGR066C	P53242	292 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	BSC5	P53755	489 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	EFM6	P53970	246 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	ADA2	Q02336	434 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	INA17	Q02888	182 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	GIP3	Q03016	1276 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	GIR2	Q03768	265 aa	Predicted RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	COQ9	Q05779	260 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	IRC25	Q07951	179 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	YBR126W-A	Q8TGU7	68 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	PSK1	P31374	1356 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	RAV1	P47104	1357 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	PEP4	P07267	405 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	FUM1	P08417	488 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	HOM3	P10869	527 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	ART10	P18634	518 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	RNA14	P25298	677 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	SNT1	P25357	1226 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	PRR1	P28708	518 aa		0.39	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms