RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	RTN1	Q04947	295 aa	Known RBP	4.91	□□□□□ -1.62
SIS2	YKR072C	DIS3	Q08162	1001 aa	Known RBP	4.91	□□□□□ -1.62
SIS2	YKR072C	INP53	Q12271	1107 aa		4.91	□□□□□ -1.62
SIS2	YKR072C	GAL10	P04397	699 aa		4.9	□□□□□ -1.62
SIS2	YKR072C	ARG80	P07249	177 aa		4.9	□□□□□ -1.62
SIS2	YKR072C	PMR1	P13586	950 aa		4.9	□□□□□ -1.62
SIS2	YKR072C	SAR1	P20606	190 aa	Known RBP	4.9	□□□□□ -1.62
SIS2	YKR072C	RME1	P32338	300 aa	Known RBP	4.9	□□□□□ -1.62
SIS2	YKR072C	SOF1	P33750	489 aa	Known RBP	4.9	□□□□□ -1.62
SIS2	YKR072C	MRPL7	P36519	292 aa		4.9	□□□□□ -1.62
SIS2	YKR072C	ICS2	P38284	255 aa		4.9	□□□□□ -1.62
SIS2	YKR072C	SCC4	P40090	624 aa		4.9	□□□□□ -1.62
SIS2	YKR072C	YMR147W	P40218	223 aa	Known RBP	4.9	□□□□□ -1.62
SIS2	YKR072C	YGL185C	P53100	379 aa		4.9	□□□□□ -1.62
SIS2	YKR072C	VPS73	P53142	486 aa	Known RBP	4.9	□□□□□ -1.62
SIS2	YKR072C	YGR126W	P53274	230 aa		4.9	□□□□□ -1.62
SIS2	YKR072C	SSY1	Q03770	852 aa		4.9	□□□□□ -1.62
SIS2	YKR072C	YMR160W	Q03823	816 aa		4.9	□□□□□ -1.62
SIS2	YKR072C	APC4	Q04601	652 aa		4.9	□□□□□ -1.62
SIS2	YKR072C	RRG8	Q06109	277 aa		4.9	□□□□□ -1.62
SIS2	YKR072C	VAC14	Q06708	880 aa		4.9	□□□□□ -1.62
SIS2	YKR072C	YPR078C	Q06813	372 aa		4.9	□□□□□ -1.62
SIS2	YKR072C	ETT1	Q08421	412 aa	Known RBP	4.9	□□□□□ -1.62
SIS2	YKR072C	GIS3	Q12418	502 aa		4.9	□□□□□ -1.62
SIS2	YKR072C	ESC1	Q03661	1658 aa	Known RBP	4.9	□□□□□ -1.62
SIS2	YKR072C	SKI3	P17883	1432 aa	Known RBP	4.9	□□□□□ -1.63
SIS2	YKR072C	JIP3	O13555	125 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	COX1	P00401	534 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	RPL24A	P04449	155 aa	Known RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	HIS5	P07172	385 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	YMR085W	P0CF18	432 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	ERG11	P10614	530 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	CDC23	P16522	626 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	FUS3	P16892	353 aa	Known RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	KGD2	P19262	463 aa	Predicted RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	SRP54	P20424	541 aa	Known RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	RPI1	P23250	407 aa	Known RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	MEK1	P24719	497 aa	Predicted RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	MSS1	P32559	526 aa	Predicted RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	CDC5	P32562	705 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	SRB4	P32569	687 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	HES1	P35843	434 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	SNU114	P36048	1008 aa	Known RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	IMD2	P38697	523 aa	Known RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	FMO1	P38866	432 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	RIX1	P38883	763 aa	Predicted RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	SAP1	P39955	897 aa	Known RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	YER085C	P40058	173 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	YIR014W	P40570	242 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	BAP3	P41815	604 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	RPN11	P43588	306 aa	Known RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	MRK1	P50873	501 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	COQ6	P53318	479 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	OCA2	P53949	197 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	CAB5	Q03941	241 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	YDR109C	Q04585	715 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	GTO3	Q04806	366 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	IZH3	Q07959	543 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	GAS5	Q08193	484 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	CRT10	Q08226	957 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	DCP1	Q12517	231 aa	Predicted RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	AI5_ALPHA	Q9ZZX1	630 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	DNF1	P32660	1571 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	CYC1	P00044	109 aa	Predicted RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	GPH1	P06738	902 aa	Known RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	PUT2	P07275	575 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	SEC62	P21825	274 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	LHS1	P36016	881 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	RPF2	P36160	344 aa	Known RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	YHR045W	P38775	560 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	ELO1	P39540	310 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	SHQ1	P40486	507 aa	Predicted RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	YRB2	P40517	327 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	AIM22	P47051	409 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	RIB4	P50861	169 aa	Predicted RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	PIB2	P53191	635 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	MRPS35	P53292	345 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	DBP6	P53734	629 aa	Known RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	KTR6	P54070	446 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	REX2	P54964	269 aa	Known RBP	4.89	□□□□□ -1.63
SIS2	YKR072C	ECM30	Q06673	1274 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	RTT109	Q07794	436 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	RRD2	Q12461	358 aa		4.89	□□□□□ -1.63
SIS2	YKR072C	UFD4	P33202	1483 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	RKR1	Q04781	1562 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	ESP1	Q03018	1630 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	CDC36	P06100	191 aa	Predicted RBP	4.88	□□□□□ -1.63
SIS2	YKR072C	ALG1	P16661	449 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	SPE2	P21182	396 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	ADY2	P25613	283 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	BEM1	P29366	551 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	ECM25	P32525	599 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	PTK1	P36002	662 aa	Predicted RBP	4.88	□□□□□ -1.63
SIS2	YKR072C	CUE2	P36075	443 aa	Known RBP	4.88	□□□□□ -1.63
SIS2	YKR072C	NUP133	P36161	1157 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	RCY1	P39531	840 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	YER130C	P39959	443 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	UTP18	P40362	594 aa	Predicted RBP	4.88	□□□□□ -1.63
SIS2	YKR072C	ATM1	P40416	690 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	CHA4	P43634	648 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms