RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W KEL3Q08979 651 aaPredicted RBP3.79□□□□□ -1.8
SEC28YIL076W HIP1P06775 603 aa3.78□□□□□ -1.8
SEC28YIL076W COR1P07256 457 aa3.78□□□□□ -1.8
SEC28YIL076W SEC53P07283 254 aaKnown RBP3.78□□□□□ -1.8
SEC28YIL076W PRP2P20095 876 aaPredicted RBP3.78□□□□□ -1.8
SEC28YIL076W YEL045CP32616 141 aa3.78□□□□□ -1.8
SEC28YIL076W GCD10P41814 478 aa3.78□□□□□ -1.8
SEC28YIL076W CHS1P08004 1131 aa3.77□□□□□ -1.81
SEC28YIL076W HSC82P15108 705 aaKnown RBP3.77□□□□□ -1.81
SEC28YIL076W YME1P32795 747 aa3.77□□□□□ -1.81
SEC28YIL076W YBL059WP34224 193 aa3.77□□□□□ -1.81
SEC28YIL076W AVT4P50944 713 aa3.77□□□□□ -1.81
SEC28YIL076W CAF40P53829 373 aa3.77□□□□□ -1.81
SEC28YIL076W YJR112W-AQ3E743 109 aa3.77□□□□□ -1.81
SEC28YIL076W RAV1P47104 1357 aa3.76□□□□□ -1.81
SEC28YIL076W HEM15P16622 393 aa3.76□□□□□ -1.81
SEC28YIL076W BUB3P26449 341 aa3.76□□□□□ -1.81
SEC28YIL076W YIM1P28625 365 aa3.76□□□□□ -1.81
SEC28YIL076W ATP11P32453 318 aa3.76□□□□□ -1.81
SEC28YIL076W FRE2P36033 711 aa3.76□□□□□ -1.81
SEC28YIL076W REG2P38232 338 aa3.76□□□□□ -1.81
SEC28YIL076W MBB1P39534 108 aa3.76□□□□□ -1.81
SEC28YIL076W MRX6P48564 524 aa3.76□□□□□ -1.81
SEC28YIL076W ELP3Q02908 557 aaKnown RBP3.76□□□□□ -1.81
SEC28YIL076W PBA1Q05778 276 aa3.76□□□□□ -1.81
SEC28YIL076W RCN2Q12044 265 aa3.76□□□□□ -1.81
SEC28YIL076W ERV2Q12284 196 aa3.76□□□□□ -1.81
SEC28YIL076W SEM1O94742 89 aa3.75□□□□□ -1.81
SEC28YIL076W GAL80P04387 435 aa3.75□□□□□ -1.81
SEC28YIL076W AAC3P18238 307 aa3.75□□□□□ -1.81
SEC28YIL076W PRD1P25375 712 aa3.75□□□□□ -1.81
SEC28YIL076W MFT1P33441 392 aaKnown RBP3.75□□□□□ -1.81
SEC28YIL076W MUM2P38236 366 aa3.75□□□□□ -1.81
SEC28YIL076W KEL1P38853 1164 aaKnown RBP3.75□□□□□ -1.81
SEC28YIL076W YFL067WP43537 175 aa3.75□□□□□ -1.81
SEC28YIL076W FIN1Q03898 291 aa3.75□□□□□ -1.81
SEC28YIL076W VPS38Q05919 439 aa3.75□□□□□ -1.81
SEC28YIL076W CTI6Q08923 506 aa3.75□□□□□ -1.81
SEC28YIL076W TMS1Q12116 473 aa3.75□□□□□ -1.81
SEC28YIL076W ENT1Q12518 454 aa3.75□□□□□ -1.81
SEC28YIL076W NDI1P32340 513 aa3.74□□□□□ -1.81
SEC28YIL076W PAD1P33751 242 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
SEC28YIL076W WBP1P33767 430 aaKnown RBP3.74□□□□□ -1.81
SEC28YIL076W RSM22P36056 628 aa3.74□□□□□ -1.81
SEC28YIL076W RRT2P38332 387 aa3.74□□□□□ -1.81
SEC28YIL076W ERP2P39704 215 aa3.74□□□□□ -1.81
SEC28YIL076W YGR210CP42942 411 aa3.74□□□□□ -1.81
SEC28YIL076W RRT5P43607 289 aa3.74□□□□□ -1.81
SEC28YIL076W YGR066CP53242 292 aa3.74□□□□□ -1.81
SEC28YIL076W BTN2P53286 410 aa3.74□□□□□ -1.81
SEC28YIL076W RRN11Q04712 507 aa3.74□□□□□ -1.81
SEC28YIL076W PAL1Q05518 499 aaKnown RBP3.74□□□□□ -1.81
SEC28YIL076W ESA1Q08649 445 aa3.74□□□□□ -1.81
SEC28YIL076W YDR056CQ12025 205 aa3.74□□□□□ -1.81
SEC28YIL076W AVL9Q12500 764 aa3.74□□□□□ -1.81
SEC28YIL076W BRR1Q99177 341 aaPredicted RBP3.74□□□□□ -1.81
SEC28YIL076W HHF1P02309 103 aaKnown RBP3.73□□□□□ -1.81
SEC28YIL076W NAT2P37293 288 aa3.73□□□□□ -1.81
SEC28YIL076W NOP16P40007 231 aaKnown RBP3.73□□□□□ -1.81
SEC28YIL076W SYG1P40528 902 aa3.73□□□□□ -1.81
SEC28YIL076W UPF3P48412 387 aaKnown RBP3.73□□□□□ -1.81
SEC28YIL076W ART5P53244 586 aaKnown RBP3.73□□□□□ -1.81
SEC28YIL076W CAF130P53280 1122 aaPredicted RBP3.73□□□□□ -1.81
SEC28YIL076W MFB1Q04922 465 aa3.73□□□□□ -1.81
SEC28YIL076W BSC6Q08280 497 aa3.73□□□□□ -1.81
SEC28YIL076W THP3Q12049 470 aaKnown RBP3.73□□□□□ -1.81
SEC28YIL076W CBS1P14066 229 aa3.72□□□□□ -1.81
SEC28YIL076W GLC7P32598 312 aaKnown RBP3.72□□□□□ -1.81
SEC28YIL076W POP1P41812 875 aa3.72□□□□□ -1.81
SEC28YIL076W SDT1P53078 280 aa3.72□□□□□ -1.81
SEC28YIL076W SLG1P54867 378 aa3.72□□□□□ -1.81
SEC28YIL076W MRPL35Q06678 367 aa3.72□□□□□ -1.81
SEC28YIL076W TMC1Q08422 150 aaPredicted RBP3.72□□□□□ -1.81
SEC28YIL076W CPR4P25334 318 aa3.71□□□□□ -1.82
SEC28YIL076W PEP3P27801 918 aa3.71□□□□□ -1.82
SEC28YIL076W NOP4P37838 685 aaKnown RBP3.71□□□□□ -1.82
SEC28YIL076W SWD3P38123 315 aa3.71□□□□□ -1.82
SEC28YIL076W PTH1P38876 190 aaKnown RBP3.71□□□□□ -1.82
SEC28YIL076W VID27P40157 782 aa3.71□□□□□ -1.82
SEC28YIL076W POP6P53218 158 aa3.71□□□□□ -1.82
SEC28YIL076W CLN3P13365 580 aa3.7□□□□□ -1.82
SEC28YIL076W OLE1P21147 510 aaKnown RBP3.7□□□□□ -1.82
SEC28YIL076W ISY1P21374 235 aaPredicted RBP3.7□□□□□ -1.82
SEC28YIL076W CRM1P30822 1084 aaKnown RBP3.7□□□□□ -1.82
SEC28YIL076W SRO77P38163 1010 aa3.7□□□□□ -1.82
SEC28YIL076W MTC6P38849 526 aa3.7□□□□□ -1.82
SEC28YIL076W ISC1P40015 477 aaKnown RBP3.7□□□□□ -1.82
SEC28YIL076W PET130P47065 347 aa3.7□□□□□ -1.82
SEC28YIL076W URB2P47108 1174 aa3.7□□□□□ -1.82
SEC28YIL076W OGG1P53397 376 aaPredicted RBP3.7□□□□□ -1.82
SEC28YIL076W ARO2P28777 376 aaKnown RBP3.69□□□□□ -1.82
SEC28YIL076W DOT5P40553 215 aa3.69□□□□□ -1.82
SEC28YIL076W OCA1P50946 238 aaPredicted RBP3.69□□□□□ -1.82
SEC28YIL076W GOR1P53839 350 aa3.69□□□□□ -1.82
SEC28YIL076W MHR1Q06630 226 aa3.69□□□□□ -1.82
SEC28YIL076W TSR1Q07381 788 aaKnown RBP3.69□□□□□ -1.82
SEC28YIL076W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
SEC28YIL076W RRG7Q08774 242 aaPredicted RBP3.69□□□□□ -1.82
SEC28YIL076W HRT3Q12347 344 aa3.69□□□□□ -1.82
SEC28YIL076W YDL007C-AQ2V2Q0 85 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms