RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C PAL1Q05518 499 aaKnown RBP3.11□□□□□ -1.91
PRP38YGR075C NOP58Q12499 511 aaKnown RBP3.11□□□□□ -1.91
PRP38YGR075C YBR126W-AQ8TGU7 68 aa3.11□□□□□ -1.91
PRP38YGR075C MES1P00958 751 aaKnown RBP3.1□□□□□ -1.91
PRP38YGR075C CDC16P09798 840 aa3.1□□□□□ -1.91
PRP38YGR075C SEF1P34228 1148 aa3.1□□□□□ -1.91
PRP38YGR075C SWD3P38123 315 aa3.1□□□□□ -1.91
PRP38YGR075C ALG5P40350 334 aa3.1□□□□□ -1.91
PRP38YGR075C RRT5P43607 289 aa3.1□□□□□ -1.91
PRP38YGR075C IMD4P50094 524 aaKnown RBP3.1□□□□□ -1.91
PRP38YGR075C DUO1P53168 247 aaKnown RBP3.1□□□□□ -1.91
PRP38YGR075C CAF40P53829 373 aa3.1□□□□□ -1.91
PRP38YGR075C MRPL35Q06678 367 aa3.1□□□□□ -1.91
PRP38YGR075C YPT6Q99260 215 aa3.1□□□□□ -1.91
PRP38YGR075C HHF1P02309 103 aaKnown RBP3.09□□□□□ -1.91
PRP38YGR075C PAD1P33751 242 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
PRP38YGR075C TIS11P47977 285 aa3.09□□□□□ -1.91
PRP38YGR075C AVT4P50944 713 aa3.09□□□□□ -1.91
PRP38YGR075C VID30P53076 958 aa3.09□□□□□ -1.91
PRP38YGR075C ART5P53244 586 aaKnown RBP3.09□□□□□ -1.91
PRP38YGR075C ZPR1P53303 486 aaKnown RBP3.09□□□□□ -1.91
PRP38YGR075C YEH1Q07804 573 aa3.09□□□□□ -1.91
PRP38YGR075C ESA1Q08649 445 aa3.09□□□□□ -1.91
PRP38YGR075C THP3Q12049 470 aaKnown RBP3.09□□□□□ -1.91
PRP38YGR075C HRT3Q12347 344 aa3.09□□□□□ -1.91
PRP38YGR075C SOD1P00445 154 aaKnown RBP3.08□□□□□ -1.92
PRP38YGR075C CLN3P13365 580 aa3.08□□□□□ -1.92
PRP38YGR075C PRP2P20095 876 aaPredicted RBP3.08□□□□□ -1.92
PRP38YGR075C BUB3P26449 341 aa3.08□□□□□ -1.92
PRP38YGR075C ATP11P32453 318 aa3.08□□□□□ -1.92
PRP38YGR075C SWE1P32944 819 aa3.08□□□□□ -1.92
PRP38YGR075C MFT1P33441 392 aaKnown RBP3.08□□□□□ -1.92
PRP38YGR075C MSR1P38714 643 aa3.08□□□□□ -1.92
PRP38YGR075C SUB1P54000 292 aaKnown RBP3.08□□□□□ -1.92
PRP38YGR075C YMR018WQ04364 514 aa3.08□□□□□ -1.92
PRP38YGR075C RRN11Q04712 507 aa3.08□□□□□ -1.92
PRP38YGR075C OPY2Q06810 360 aa3.08□□□□□ -1.92
PRP38YGR075C RLM1Q12224 676 aa3.08□□□□□ -1.92
PRP38YGR075C COR1P07256 457 aa3.07□□□□□ -1.92
PRP38YGR075C CPR4P25334 318 aa3.07□□□□□ -1.92
PRP38YGR075C ARO2P28777 376 aaKnown RBP3.07□□□□□ -1.92
PRP38YGR075C FRE2P36033 711 aa3.07□□□□□ -1.92
PRP38YGR075C MUD2P36084 527 aaKnown RBP3.07□□□□□ -1.92
PRP38YGR075C TCD2P36101 447 aaKnown RBP3.07□□□□□ -1.92
PRP38YGR075C KEL1P38853 1164 aaKnown RBP3.07□□□□□ -1.92
PRP38YGR075C REE1P40893 198 aa3.07□□□□□ -1.92
PRP38YGR075C RRG7Q08774 242 aaPredicted RBP3.07□□□□□ -1.92
PRP38YGR075C NMD4Q12129 218 aa3.07□□□□□ -1.92
PRP38YGR075C SUP35P05453 685 aaKnown RBP3.06□□□□□ -1.92
PRP38YGR075C HSC82P15108 705 aaKnown RBP3.06□□□□□ -1.92
PRP38YGR075C PAP1P29468 568 aaKnown RBP3.06□□□□□ -1.92
PRP38YGR075C NDI1P32340 513 aa3.06□□□□□ -1.92
PRP38YGR075C MUM2P38236 366 aa3.06□□□□□ -1.92
PRP38YGR075C FLC2P39719 783 aa3.06□□□□□ -1.92
PRP38YGR075C SGN1P40561 250 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
PRP38YGR075C YFL067WP43537 175 aa3.06□□□□□ -1.92
PRP38YGR075C YGL039WP53183 348 aaKnown RBP3.06□□□□□ -1.92
PRP38YGR075C YLR152CP54072 576 aa3.06□□□□□ -1.92
PRP38YGR075C SVL3Q03088 825 aaKnown RBP3.06□□□□□ -1.92
PRP38YGR075C BUD21Q08492 214 aaPredicted RBP3.06□□□□□ -1.92
PRP38YGR075C HUA2Q12134 243 aa3.06□□□□□ -1.92
PRP38YGR075C RBD2Q12270 262 aa3.06□□□□□ -1.92
PRP38YGR075C RAV1P47104 1357 aa3.05□□□□□ -1.92
PRP38YGR075C GLC7P32598 312 aaKnown RBP3.05□□□□□ -1.92
PRP38YGR075C NAT2P37293 288 aa3.05□□□□□ -1.92
PRP38YGR075C SRO77P38163 1010 aa3.05□□□□□ -1.92
PRP38YGR075C YDL121CQ07541 149 aa3.05□□□□□ -1.92
PRP38YGR075C ADH2P00331 348 aaKnown RBP3.04□□□□□ -1.92
PRP38YGR075C PRD1P25375 712 aa3.04□□□□□ -1.92
PRP38YGR075C SSH4P32343 579 aa3.04□□□□□ -1.92
PRP38YGR075C MCM10P32354 571 aa3.04□□□□□ -1.92
PRP38YGR075C MBB1P39534 108 aa3.04□□□□□ -1.92
PRP38YGR075C ERP2P39704 215 aa3.04□□□□□ -1.92
PRP38YGR075C SYG1P40528 902 aa3.04□□□□□ -1.92
PRP38YGR075C TOF1P53840 1238 aa3.04□□□□□ -1.92
PRP38YGR075C SLG1P54867 378 aa3.04□□□□□ -1.92
PRP38YGR075C FIN1Q03898 291 aa3.04□□□□□ -1.92
PRP38YGR075C MFB1Q04922 465 aa3.04□□□□□ -1.92
PRP38YGR075C TSR1Q07381 788 aaKnown RBP3.04□□□□□ -1.92
PRP38YGR075C CDC60P26637 1090 aaKnown RBP3.03□□□□□ -1.92
PRP38YGR075C PAH1P32567 862 aa3.03□□□□□ -1.92
PRP38YGR075C RSM22P36056 628 aa3.03□□□□□ -1.92
PRP38YGR075C POP6P53218 158 aa3.03□□□□□ -1.92
PRP38YGR075C OGG1P53397 376 aaPredicted RBP3.03□□□□□ -1.92
PRP38YGR075C YJR112W-AQ3E743 109 aa3.03□□□□□ -1.92
PRP38YGR075C CRM1P30822 1084 aaKnown RBP3.02□□□□□ -1.93
PRP38YGR075C WBP1P33767 430 aaKnown RBP3.02□□□□□ -1.93
PRP38YGR075C NAB3P38996 802 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
PRP38YGR075C VID27P40157 782 aa3.02□□□□□ -1.93
PRP38YGR075C YMR147WP40218 223 aaKnown RBP3.02□□□□□ -1.93
PRP38YGR075C IBD2P53892 351 aa3.02□□□□□ -1.93
PRP38YGR075C BRR1Q99177 341 aaPredicted RBP3.02□□□□□ -1.93
PRP38YGR075C NAT1P12945 854 aaKnown RBP3.01□□□□□ -1.93
PRP38YGR075C PRS1P32895 427 aaKnown RBP3.01□□□□□ -1.93
PRP38YGR075C MRX6P48564 524 aa3.01□□□□□ -1.93
PRP38YGR075C GOR1P53839 350 aa3.01□□□□□ -1.93
PRP38YGR075C VPS38Q05919 439 aa3.01□□□□□ -1.93
PRP38YGR075C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
PRP38YGR075C SEM1O94742 89 aa3□□□□□ -1.93
PRP38YGR075C GAL80P04387 435 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms