RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN3	YER021W	BAR1	P12630	587 aa		3.02	□□□□□ -1.93
RPN3	YER021W	CDC23	P16522	626 aa		3.02	□□□□□ -1.93
RPN3	YER021W	PRD1	P25375	712 aa		3.02	□□□□□ -1.93
RPN3	YER021W	PUP3	P25451	205 aa	Known RBP	3.02	□□□□□ -1.93
RPN3	YER021W	YUR1	P26725	428 aa		3.02	□□□□□ -1.93
RPN3	YER021W	SAC6	P32599	642 aa	Known RBP	3.02	□□□□□ -1.93
RPN3	YER021W	SLD5	Q03406	294 aa		3.02	□□□□□ -1.93
RPN3	YER021W	YLR352W	Q06479	807 aa		3.02	□□□□□ -1.93
RPN3	YER021W	GRS2	Q06817	618 aa		3.02	□□□□□ -1.93
RPN3	YER021W	NDD1	Q08887	554 aa		3.02	□□□□□ -1.93
RPN3	YER021W	KEL3	Q08979	651 aa	Predicted RBP	3.02	□□□□□ -1.93
RPN3	YER021W	NOP58	Q12499	511 aa	Known RBP	3.02	□□□□□ -1.93
RPN3	YER021W	YIH1	P25637	258 aa		3.01	□□□□□ -1.93
RPN3	YER021W	MCM4	P30665	933 aa	Known RBP	3.01	□□□□□ -1.93
RPN3	YER021W	YBL055C	P34220	418 aa	Predicted RBP	3.01	□□□□□ -1.93
RPN3	YER021W	YKL100C	P34248	587 aa		3.01	□□□□□ -1.93
RPN3	YER021W	GCS1	P35197	352 aa		3.01	□□□□□ -1.93
RPN3	YER021W	PHD1	P36093	366 aa		3.01	□□□□□ -1.93
RPN3	YER021W	CCT6	P39079	546 aa		3.01	□□□□□ -1.93
RPN3	YER021W	YER130C	P39959	443 aa		3.01	□□□□□ -1.93
RPN3	YER021W	YTA12	P40341	825 aa		3.01	□□□□□ -1.93
RPN3	YER021W	SAD1	P43589	448 aa		3.01	□□□□□ -1.93
RPN3	YER021W	ATG27	P46989	271 aa		3.01	□□□□□ -1.93
RPN3	YER021W	APT1	P49435	187 aa	Known RBP	3.01	□□□□□ -1.93
RPN3	YER021W	AZR1	P50080	613 aa		3.01	□□□□□ -1.93
RPN3	YER021W	MSC1	Q03104	513 aa		3.01	□□□□□ -1.93
RPN3	YER021W	BUD22	Q04347	519 aa	Known RBP	3.01	□□□□□ -1.93
RPN3	YER021W	MFB1	Q04922	465 aa		3.01	□□□□□ -1.93
RPN3	YER021W	LUC7	Q07508	261 aa	Predicted RBP	3.01	□□□□□ -1.93
RPN3	YER021W	ETT1	Q08421	412 aa	Known RBP	3.01	□□□□□ -1.93
RPN3	YER021W	NMD4	Q12129	218 aa		3.01	□□□□□ -1.93
RPN3	YER021W	HUA2	Q12134	243 aa		3.01	□□□□□ -1.93
RPN3	YER021W	MF(ALPHA)1	P01149	165 aa		3	□□□□□ -1.93
RPN3	YER021W	BUD5	P25300	642 aa	Predicted RBP	3	□□□□□ -1.93
RPN3	YER021W	GFD2	P25370	566 aa	Known RBP	3	□□□□□ -1.93
RPN3	YER021W	RPS2	P25443	254 aa	Known RBP	3	□□□□□ -1.93
RPN3	YER021W	SEC1	P30619	724 aa	Known RBP	3	□□□□□ -1.93
RPN3	YER021W	RPN2	P32565	945 aa	Known RBP	3	□□□□□ -1.93
RPN3	YER021W	SSE2	P32590	693 aa	Known RBP	3	□□□□□ -1.93
RPN3	YER021W	MTR2	P34232	184 aa	Known RBP	3	□□□□□ -1.93
RPN3	YER021W	SPC34	P36131	295 aa		3	□□□□□ -1.93
RPN3	YER021W	BZZ1	P38822	633 aa		3	□□□□□ -1.93
RPN3	YER021W	TMA108	P40462	946 aa		3	□□□□□ -1.93
RPN3	YER021W	YIR014W	P40570	242 aa		3	□□□□□ -1.93
RPN3	YER021W	AZF1	P41696	914 aa		3	□□□□□ -1.93
RPN3	YER021W	FAR3	P46671	204 aa		3	□□□□□ -1.93
RPN3	YER021W	GUF1	P46943	645 aa		3	□□□□□ -1.93
RPN3	YER021W	YDR415C	Q04033	374 aa	Predicted RBP	3	□□□□□ -1.93
RPN3	YER021W	NRT1	Q08485	598 aa		3	□□□□□ -1.93
RPN3	YER021W	TAH18	Q12181	623 aa		3	□□□□□ -1.93
RPN3	YER021W	SGV1	P23293	657 aa	Known RBP	3	□□□□□ -1.93
RPN3	YER021W	IMG1	P25626	169 aa		3	□□□□□ -1.93
RPN3	YER021W	CMK1	P27466	446 aa	Known RBP	3	□□□□□ -1.93
RPN3	YER021W	ROT2	P38138	954 aa		3	□□□□□ -1.93
RPN3	YER021W	FLC2	P39719	783 aa		3	□□□□□ -1.93
RPN3	YER021W	PTR3	P43606	678 aa		3	□□□□□ -1.93
RPN3	YER021W	STB2	P46679	850 aa		3	□□□□□ -1.93
RPN3	YER021W	HOS2	P53096	452 aa	Predicted RBP	3	□□□□□ -1.93
RPN3	YER021W	YGL039W	P53183	348 aa	Known RBP	3	□□□□□ -1.93
RPN3	YER021W	YGR127W	P53275	312 aa		3	□□□□□ -1.93
RPN3	YER021W	HCR1	Q05775	265 aa	Known RBP	3	□□□□□ -1.93
RPN3	YER021W	MMR1	Q06324	491 aa		3	□□□□□ -1.93
RPN3	YER021W	ERP3	Q12403	225 aa		3	□□□□□ -1.93
RPN3	YER021W	SEN1	Q00416	2231 aa	Known RBP	2.99	□□□□□ -1.93
RPN3	YER021W	CYB2	P00175	591 aa		2.99	□□□□□ -1.93
RPN3	YER021W	SEC53	P07283	254 aa	Known RBP	2.99	□□□□□ -1.93
RPN3	YER021W	SAM1	P10659	382 aa	Known RBP	2.99	□□□□□ -1.93
RPN3	YER021W	MAS2	P11914	482 aa		2.99	□□□□□ -1.93
RPN3	YER021W	GLN3	P18494	730 aa		2.99	□□□□□ -1.93
RPN3	YER021W	BOS1	P25385	244 aa		2.99	□□□□□ -1.93
RPN3	YER021W	SNC1	P31109	117 aa		2.99	□□□□□ -1.93
RPN3	YER021W	YBR144C	P34215	104 aa		2.99	□□□□□ -1.93
RPN3	YER021W	YAT2	P40017	923 aa		2.99	□□□□□ -1.93
RPN3	YER021W	ALD5	P40047	520 aa	Known RBP	2.99	□□□□□ -1.93
RPN3	YER021W	CUL3	P53202	744 aa		2.99	□□□□□ -1.93
RPN3	YER021W	HEF3	P53978	1044 aa	Known RBP	2.99	□□□□□ -1.93
RPN3	YER021W	YPL014W	Q02606	381 aa		2.99	□□□□□ -1.93
RPN3	YER021W	YMR160W	Q03823	816 aa		2.99	□□□□□ -1.93
RPN3	YER021W	DIC1	Q06143	298 aa		2.99	□□□□□ -1.93
RPN3	YER021W	SSK1	Q07084	712 aa		2.99	□□□□□ -1.93
RPN3	YER021W	YEH1	Q07804	573 aa		2.99	□□□□□ -1.93
RPN3	YER021W	FMP40	Q08968	688 aa	Predicted RBP	2.99	□□□□□ -1.93
RPN3	YER021W	YPT6	Q99260	215 aa		2.99	□□□□□ -1.93
RPN3	YER021W	CCH1	P50077	2039 aa		2.98	□□□□□ -1.93
RPN3	YER021W	MRP13	P12686	339 aa		2.98	□□□□□ -1.93
RPN3	YER021W	OLE1	P21147	510 aa	Known RBP	2.98	□□□□□ -1.93
RPN3	YER021W	SGF29	P25554	259 aa		2.98	□□□□□ -1.93
RPN3	YER021W	ERG1	P32476	496 aa	Known RBP	2.98	□□□□□ -1.93
RPN3	YER021W	TRS65	P32893	560 aa		2.98	□□□□□ -1.93
RPN3	YER021W	TIF3	P34167	436 aa	Known RBP	2.98	□□□□□ -1.93
RPN3	YER021W	SHP1	P34223	423 aa		2.98	□□□□□ -1.93
RPN3	YER021W	UBP11	P36026	717 aa		2.98	□□□□□ -1.93
RPN3	YER021W	MIC60	P36112	540 aa		2.98	□□□□□ -1.93
RPN3	YER021W	RPL32	P38061	130 aa	Known RBP	2.98	□□□□□ -1.93
RPN3	YER021W	PHO88	P38264	188 aa	Predicted RBP	2.98	□□□□□ -1.93
RPN3	YER021W	ICS2	P38284	255 aa		2.98	□□□□□ -1.93
RPN3	YER021W	LAG1	P38703	411 aa		2.98	□□□□□ -1.93
RPN3	YER021W	TVP23	P38962	199 aa		2.98	□□□□□ -1.93
RPN3	YER021W	MAF1	P41910	395 aa		2.98	□□□□□ -1.93
RPN3	YER021W	MRX6	P48564	524 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms