RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W CBR1P38626 284 aaKnown RBP5.62□□□□□ -1.51
VMS1YDR049W HRB1P38922 454 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
VMS1YDR049W AGE2P40529 298 aa5.62□□□□□ -1.51
VMS1YDR049W BIT61P47041 543 aa5.62□□□□□ -1.51
VMS1YDR049W TMA22P47089 198 aaPredicted RBP5.62□□□□□ -1.51
VMS1YDR049W STR3P53101 465 aaKnown RBP5.62□□□□□ -1.51
VMS1YDR049W YIP5P53108 310 aa5.62□□□□□ -1.51
VMS1YDR049W PUS2P53167 370 aa5.62□□□□□ -1.51
VMS1YDR049W DIP5P53388 608 aa5.62□□□□□ -1.51
VMS1YDR049W EAF7P53911 425 aaKnown RBP5.62□□□□□ -1.51
VMS1YDR049W RRP45Q05636 305 aaKnown RBP5.62□□□□□ -1.51
VMS1YDR049W RTT109Q07794 436 aa5.62□□□□□ -1.51
VMS1YDR049W ALG6Q12001 544 aaKnown RBP5.62□□□□□ -1.51
VMS1YDR049W DFG16Q99234 619 aa5.62□□□□□ -1.51
VMS1YDR049W THO2P53552 1597 aaKnown RBP5.62□□□□□ -1.51
VMS1YDR049W PMA1P05030 918 aaKnown RBP5.62□□□□□ -1.51
VMS1YDR049W LEU4P06208 619 aaKnown RBP5.62□□□□□ -1.51
VMS1YDR049W ILV2P07342 687 aaKnown RBP5.62□□□□□ -1.51
VMS1YDR049W SEC12P11655 471 aa5.62□□□□□ -1.51
VMS1YDR049W SNF5P18480 905 aa5.62□□□□□ -1.51
VMS1YDR049W CMK2P22517 447 aa5.62□□□□□ -1.51
VMS1YDR049W VPS34P22543 875 aa5.62□□□□□ -1.51
VMS1YDR049W PPH22P23595 377 aa5.62□□□□□ -1.51
VMS1YDR049W PBN1P25580 416 aa5.62□□□□□ -1.51
VMS1YDR049W CWP1P28319 239 aa5.62□□□□□ -1.51
VMS1YDR049W AGP2P38090 596 aa5.62□□□□□ -1.51
VMS1YDR049W COS5P47187 383 aa5.62□□□□□ -1.51
VMS1YDR049W IMD4P50094 524 aaKnown RBP5.62□□□□□ -1.51
VMS1YDR049W YGR045CP53229 120 aa5.62□□□□□ -1.51
VMS1YDR049W SSU72P53538 206 aaPredicted RBP5.62□□□□□ -1.51
VMS1YDR049W FIN1Q03898 291 aa5.62□□□□□ -1.51
VMS1YDR049W YMR130WQ04223 302 aa5.62□□□□□ -1.51
VMS1YDR049W NDL1Q06568 189 aa5.62□□□□□ -1.51
VMS1YDR049W COS7Q07788 383 aa5.62□□□□□ -1.51
VMS1YDR049W MED2Q12124 431 aa5.62□□□□□ -1.51
VMS1YDR049W ATG2P53855 1592 aa5.61□□□□□ -1.51
VMS1YDR049W YBR085C-AO43137 85 aa5.61□□□□□ -1.51
VMS1YDR049W RPL35AP0CX84 120 aaKnown RBP5.61□□□□□ -1.51
VMS1YDR049W RPL35BP0CX85 120 aaKnown RBP5.61□□□□□ -1.51
VMS1YDR049W MGR1P25573 417 aa5.61□□□□□ -1.51
VMS1YDR049W CIN8P27895 1000 aa5.61□□□□□ -1.51
VMS1YDR049W STB5P38699 743 aa5.61□□□□□ -1.51
VMS1YDR049W GID8P40208 455 aa5.61□□□□□ -1.51
VMS1YDR049W ATM1P40416 690 aa5.61□□□□□ -1.51
VMS1YDR049W SEC24P40482 926 aaKnown RBP5.61□□□□□ -1.51
VMS1YDR049W MET32Q12041 191 aa5.61□□□□□ -1.51
VMS1YDR049W PDE2P06776 526 aa5.6□□□□□ -1.51
VMS1YDR049W CDC21P06785 304 aa5.6□□□□□ -1.51
VMS1YDR049W NHP6BP11633 99 aaKnown RBP5.6□□□□□ -1.51
VMS1YDR049W ZRC1P20107 442 aa5.6□□□□□ -1.51
VMS1YDR049W PSO2P30620 661 aa5.6□□□□□ -1.51
VMS1YDR049W RPD3P32561 433 aa5.6□□□□□ -1.51
VMS1YDR049W YMR262WP38430 313 aa5.6□□□□□ -1.51
VMS1YDR049W VHS2P40463 436 aa5.6□□□□□ -1.51
VMS1YDR049W GTS1P40956 396 aa5.6□□□□□ -1.51
VMS1YDR049W ERG10P41338 398 aaKnown RBP5.6□□□□□ -1.51
VMS1YDR049W OYE3P41816 400 aaPredicted RBP5.6□□□□□ -1.51
VMS1YDR049W SAD1P43589 448 aa5.6□□□□□ -1.51
VMS1YDR049W SLI1P53304 468 aa5.6□□□□□ -1.51
VMS1YDR049W MYO5Q04439 1219 aaKnown RBP5.6□□□□□ -1.51
VMS1YDR049W PIG1Q06216 648 aa5.6□□□□□ -1.51
VMS1YDR049W INP53Q12271 1107 aa5.6□□□□□ -1.51
VMS1YDR049W RRP12Q12754 1228 aaKnown RBP5.6□□□□□ -1.51
VMS1YDR049W ESP1Q03018 1630 aa5.6□□□□□ -1.51
VMS1YDR049W TUB3P09734 445 aaKnown RBP5.6□□□□□ -1.51
VMS1YDR049W MATALPHA1P0CY06 175 aa5.6□□□□□ -1.51
VMS1YDR049W HMLALPHA1P0CY07 175 aa5.6□□□□□ -1.51
VMS1YDR049W POL30P15873 258 aaKnown RBP5.6□□□□□ -1.51
VMS1YDR049W ADE1P27616 306 aa5.6□□□□□ -1.51
VMS1YDR049W PPA2P28239 310 aa5.6□□□□□ -1.51
VMS1YDR049W PRE2P30656 287 aaKnown RBP5.6□□□□□ -1.51
VMS1YDR049W ERG7P38604 731 aa5.6□□□□□ -1.51
VMS1YDR049W SEC72P39742 193 aaKnown RBP5.6□□□□□ -1.51
VMS1YDR049W NDC80P40460 691 aa5.6□□□□□ -1.51
VMS1YDR049W HIT1P46973 164 aa5.6□□□□□ -1.51
VMS1YDR049W AIM22P47051 409 aa5.6□□□□□ -1.51
VMS1YDR049W MFM1Q02783 413 aa5.6□□□□□ -1.51
VMS1YDR049W EKI1Q03764 534 aa5.6□□□□□ -1.51
VMS1YDR049W YMR226CQ05016 267 aaKnown RBP5.6□□□□□ -1.51
VMS1YDR049W CRT10Q08226 957 aa5.6□□□□□ -1.51
VMS1YDR049W GPM1P00950 247 aaKnown RBP5.59□□□□□ -1.51
VMS1YDR049W PYC1P11154 1178 aaKnown RBP5.59□□□□□ -1.51
VMS1YDR049W RHB1P25378 209 aa5.59□□□□□ -1.51
VMS1YDR049W YUR1P26725 428 aa5.59□□□□□ -1.51
VMS1YDR049W PDB1P32473 366 aaKnown RBP5.59□□□□□ -1.51
VMS1YDR049W SRB5P32585 307 aa5.59□□□□□ -1.51
VMS1YDR049W IML3P38265 245 aa5.59□□□□□ -1.51
VMS1YDR049W FHL1P39521 936 aa5.59□□□□□ -1.51
VMS1YDR049W YJL193WP39542 402 aa5.59□□□□□ -1.51
VMS1YDR049W TOS3P43637 560 aa5.59□□□□□ -1.51
VMS1YDR049W KAP114P53067 1004 aa5.59□□□□□ -1.51
VMS1YDR049W YNL260CP53846 198 aa5.59□□□□□ -1.51
VMS1YDR049W NOP13P53883 403 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
VMS1YDR049W RNT1Q02555 471 aa5.59□□□□□ -1.51
VMS1YDR049W MTG1Q03151 367 aaPredicted RBP5.59□□□□□ -1.51
VMS1YDR049W COX20Q04935 205 aa5.59□□□□□ -1.51
VMS1YDR049W RXT3Q07458 294 aa5.59□□□□□ -1.51
VMS1YDR049W YLR040CQ07988 224 aa5.59□□□□□ -1.51
VMS1YDR049W SIL1Q08199 421 aa5.59□□□□□ -1.51
VMS1YDR049W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
Retrieved 100 of 5,963 RNA–protein pairs in 86.8 ms