RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB1YDL229W YOR114WQ12219 294 aa4.26□□□□□ -1.73
SSB1YDL229W RRP42Q12277 265 aaPredicted RBP4.26□□□□□ -1.73
SSB1YDL229W PSY3Q12318 242 aa4.26□□□□□ -1.73
SSB1YDL229W SRF1Q12516 437 aa4.26□□□□□ -1.73
SSB1YDL229W YHR213W-AQ8TGT4 77 aa4.26□□□□□ -1.73
SSB1YDL229W SSA3P09435 649 aaKnown RBP4.25□□□□□ -1.73
SSB1YDL229W MRP7P12687 371 aa4.25□□□□□ -1.73
SSB1YDL229W PDX1P16451 410 aa4.25□□□□□ -1.73
SSB1YDL229W GRX2P17695 143 aaKnown RBP4.25□□□□□ -1.73
SSB1YDL229W PUP1P25043 261 aa4.25□□□□□ -1.73
SSB1YDL229W CMK1P27466 446 aaKnown RBP4.25□□□□□ -1.73
SSB1YDL229W SCM4P32564 187 aa4.25□□□□□ -1.73
SSB1YDL229W BEM3P32873 1128 aa4.25□□□□□ -1.73
SSB1YDL229W BCK2P33306 851 aa4.25□□□□□ -1.73
SSB1YDL229W YBP1P38315 674 aa4.25□□□□□ -1.73
SSB1YDL229W YBR259WP38338 688 aa4.25□□□□□ -1.73
SSB1YDL229W PRE3P38624 215 aa4.25□□□□□ -1.73
SSB1YDL229W FET4P40988 552 aa4.25□□□□□ -1.73
SSB1YDL229W SIP4P46954 829 aa4.25□□□□□ -1.73
SSB1YDL229W MRX6P48564 524 aa4.25□□□□□ -1.73
SSB1YDL229W PUS4P48567 403 aaKnown RBP4.25□□□□□ -1.73
SSB1YDL229W AIM14P53109 570 aa4.25□□□□□ -1.73
SSB1YDL229W SMA1Q02651 245 aa4.25□□□□□ -1.73
SSB1YDL229W ENT5Q03769 411 aaKnown RBP4.25□□□□□ -1.73
SSB1YDL229W CSN9Q03981 162 aa4.25□□□□□ -1.73
SSB1YDL229W YLR283WQ05867 314 aa4.25□□□□□ -1.73
SSB1YDL229W THI22Q06490 572 aa4.25□□□□□ -1.73
SSB1YDL229W YPR196WQ06595 470 aa4.25□□□□□ -1.73
SSB1YDL229W LDB18Q07887 179 aa4.25□□□□□ -1.73
SSB1YDL229W GRE1Q08969 168 aa4.25□□□□□ -1.73
SSB1YDL229W YOR012WQ12351 137 aa4.25□□□□□ -1.73
SSB1YDL229W WIP1Q2V2P8 89 aa4.25□□□□□ -1.73
SSB1YDL229W TSC13Q99190 310 aa4.25□□□□□ -1.73
SSB1YDL229W DDP1Q99321 188 aaKnown RBP4.25□□□□□ -1.73
SSB1YDL229W DUR1,2P32528 1835 aaKnown RBP4.25□□□□□ -1.73
SSB1YDL229W RPP2AP05319 106 aaKnown RBP4.25□□□□□ -1.73
SSB1YDL229W FUM1P08417 488 aaKnown RBP4.25□□□□□ -1.73
SSB1YDL229W TUB3P09734 445 aaKnown RBP4.25□□□□□ -1.73
SSB1YDL229W MRP13P12686 339 aa4.25□□□□□ -1.73
SSB1YDL229W CAF20P12962 161 aaKnown RBP4.25□□□□□ -1.73
SSB1YDL229W ARO3P14843 370 aaKnown RBP4.25□□□□□ -1.73
SSB1YDL229W VPS33P20795 691 aa4.25□□□□□ -1.73
SSB1YDL229W VPS34P22543 875 aa4.25□□□□□ -1.73
SSB1YDL229W BUD5P25300 642 aaPredicted RBP4.25□□□□□ -1.73
SSB1YDL229W MGR1P25573 417 aa4.25□□□□□ -1.73
SSB1YDL229W PER1P25625 357 aa4.25□□□□□ -1.73
SSB1YDL229W RPS5P26783 225 aaKnown RBP4.25□□□□□ -1.73
SSB1YDL229W GSY2P27472 705 aa4.25□□□□□ -1.73
SSB1YDL229W PET309P32522 965 aaPredicted RBP4.25□□□□□ -1.73
SSB1YDL229W SAC6P32599 642 aaKnown RBP4.25□□□□□ -1.73
SSB1YDL229W MTH1P35198 433 aa4.25□□□□□ -1.73
SSB1YDL229W AIM29P36154 155 aa4.25□□□□□ -1.73
SSB1YDL229W YHL008CP38750 627 aa4.25□□□□□ -1.73
SSB1YDL229W ERV46P39727 415 aa4.25□□□□□ -1.73
SSB1YDL229W NPR2P39923 615 aa4.25□□□□□ -1.73
SSB1YDL229W YER130CP39959 443 aa4.25□□□□□ -1.73
SSB1YDL229W YJL068CP40363 299 aa4.25□□□□□ -1.73
SSB1YDL229W DPH1P40487 425 aaKnown RBP4.25□□□□□ -1.73
SSB1YDL229W MET28P40573 187 aa4.25□□□□□ -1.73
SSB1YDL229W CAF16P43569 289 aa4.25□□□□□ -1.73
SSB1YDL229W BIR1P47134 954 aa4.25□□□□□ -1.73
SSB1YDL229W SCY1P53009 804 aa4.25□□□□□ -1.73
SSB1YDL229W DOC1P53068 250 aa4.25□□□□□ -1.73
SSB1YDL229W TIM21P53220 239 aa4.25□□□□□ -1.73
SSB1YDL229W BUD17P53727 317 aa4.25□□□□□ -1.73
SSB1YDL229W MRPL19P53875 158 aa4.25□□□□□ -1.73
SSB1YDL229W DIA1P54005 336 aa4.25□□□□□ -1.73
SSB1YDL229W TIM10P87108 93 aa4.25□□□□□ -1.73
SSB1YDL229W YPR127WQ06494 345 aa4.25□□□□□ -1.73
SSB1YDL229W ZEO1Q08245 113 aa4.25□□□□□ -1.73
SSB1YDL229W FLC1Q08967 793 aa4.25□□□□□ -1.73
SSB1YDL229W TGL5Q12043 749 aa4.25□□□□□ -1.73
SSB1YDL229W INP53Q12271 1107 aa4.25□□□□□ -1.73
SSB1YDL229W YDR262WQ12331 272 aa4.25□□□□□ -1.73
SSB1YDL229W HTB1P02293 131 aaKnown RBP4.24□□□□□ -1.73
SSB1YDL229W HTB2P02294 131 aa4.24□□□□□ -1.73
SSB1YDL229W CDC9P04819 755 aa4.24□□□□□ -1.73
SSB1YDL229W PHR1P05066 565 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
SSB1YDL229W CYT1P07143 309 aa4.24□□□□□ -1.73
SSB1YDL229W SAM1P10659 382 aaKnown RBP4.24□□□□□ -1.73
SSB1YDL229W DIT2P21595 489 aa4.24□□□□□ -1.73
SSB1YDL229W AFT1P22149 690 aa4.24□□□□□ -1.73
SSB1YDL229W BOS1P25385 244 aa4.24□□□□□ -1.73
SSB1YDL229W SBA1P28707 216 aaKnown RBP4.24□□□□□ -1.73
SSB1YDL229W KAP122P32767 1081 aa4.24□□□□□ -1.73
SSB1YDL229W HBS1P32769 611 aaKnown RBP4.24□□□□□ -1.73
SSB1YDL229W COT1P32798 439 aa4.24□□□□□ -1.73
SSB1YDL229W PRX1P34227 261 aaKnown RBP4.24□□□□□ -1.73
SSB1YDL229W CSG2P35206 410 aa4.24□□□□□ -1.73
SSB1YDL229W OAR1P35731 278 aa4.24□□□□□ -1.73
SSB1YDL229W YBR139WP38109 508 aa4.24□□□□□ -1.73
SSB1YDL229W MCX1P38323 520 aaPredicted RBP4.24□□□□□ -1.73
SSB1YDL229W LEU5P38702 357 aa4.24□□□□□ -1.73
SSB1YDL229W CYC2P38909 366 aa4.24□□□□□ -1.73
SSB1YDL229W RBG1P39729 369 aa4.24□□□□□ -1.73
SSB1YDL229W GIP2P40036 548 aa4.24□□□□□ -1.73
SSB1YDL229W SMX2P40204 77 aaKnown RBP4.24□□□□□ -1.73
SSB1YDL229W HXT8P40886 569 aa4.24□□□□□ -1.73
SSB1YDL229W ULI1P43604 169 aa4.24□□□□□ -1.73
SSB1YDL229W IRC5P43610 853 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 71.9 ms