RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 GCOM1H8Y6P7 765 aaPredicted RBP11.93□□□□□ -0.5
CCDC47-203ENST00000580986 M0R2N6 131 aa11.93□□□□□ -0.5
CCDC47-203ENST00000580986 TNPO2O14787 897 aaKnown RBP11.93□□□□□ -0.5
CCDC47-203ENST00000580986 PEX10O60683 326 aa11.93□□□□□ -0.5
CCDC47-203ENST00000580986 POLR2MP0CAP2 368 aa11.93□□□□□ -0.5
CCDC47-203ENST00000580986 XRCC5P13010 732 aaKnown RBP11.93□□□□□ -0.5
CCDC47-203ENST00000580986 RPS6P62753 249 aaKnown RBP11.93□□□□□ -0.5
CCDC47-203ENST00000580986 IRF5Q13568 498 aa11.93□□□□□ -0.5
CCDC47-203ENST00000580986 KRT40Q6A162 431 aa11.93□□□□□ -0.5
CCDC47-203ENST00000580986 RNF207Q6ZRF8 634 aa11.93□□□□□ -0.5
CCDC47-203ENST00000580986 ANKRD35Q8N283 1001 aa11.93□□□□□ -0.5
CCDC47-203ENST00000580986 MSL3Q8N5Y2 521 aaKnown RBP11.93□□□□□ -0.5
CCDC47-203ENST00000580986 FAM133AQ8N9E0 248 aa11.93□□□□□ -0.5
CCDC47-203ENST00000580986 ZNF296Q8WUU4 475 aaPredicted RBP11.93□□□□□ -0.5
CCDC47-203ENST00000580986 USP6NLQ92738 828 aa11.93□□□□□ -0.5
CCDC47-203ENST00000580986 AIFM3Q96NN9 605 aa11.93□□□□□ -0.5
CCDC47-203ENST00000580986 MMP19Q99542 508 aa11.93□□□□□ -0.5
CCDC47-203ENST00000580986 HOMER2Q9NSB8 354 aa11.93□□□□□ -0.5
CCDC47-203ENST00000580986 SLC5A4Q9NY91 659 aa11.93□□□□□ -0.5
CCDC47-203ENST00000580986 ZNFX1Q9P2E3 1918 aaKnown RBP11.93□□□□□ -0.5
CCDC47-203ENST00000580986 PLXNA1Q9UIW2 1896 aa11.93□□□□□ -0.5
CCDC47-203ENST00000580986 PPFIA3O75145 1194 aa11.92□□□□□ -0.5
CCDC47-203ENST00000580986 HOXD10P28358 340 aa11.92□□□□□ -0.5
CCDC47-203ENST00000580986 ADORA2AP29274 412 aa11.92□□□□□ -0.5
CCDC47-203ENST00000580986 PSMC4P43686 418 aa11.92□□□□□ -0.5
CCDC47-203ENST00000580986 CTCFP49711 727 aaPredicted RBP11.92□□□□□ -0.5
CCDC47-203ENST00000580986 NLRP5P59047 1200 aa11.92□□□□□ -0.5
CCDC47-203ENST00000580986 SAFBQ15424 915 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCDC47-203ENST00000580986 LARP1BQ659C4 914 aaKnown RBP11.92□□□□□ -0.5
CCDC47-203ENST00000580986 BLIDQ8IZY5 108 aa11.92□□□□□ -0.5
CCDC47-203ENST00000580986 REXO1Q8N1G1 1221 aaKnown RBP11.92□□□□□ -0.5
CCDC47-203ENST00000580986 TRIM47Q96LD4 638 aa11.92□□□□□ -0.5
CCDC47-203ENST00000580986 NUDT12Q9BQG2 462 aa11.92□□□□□ -0.5
CCDC47-203ENST00000580986 FOXP1Q9H334 677 aaPredicted RBP11.92□□□□□ -0.5
CCDC47-203ENST00000580986 ADD3Q9UEY8 706 aaKnown RBP11.92□□□□□ -0.5
CCDC47-203ENST00000580986 GJD2Q9UKL4 321 aa11.92□□□□□ -0.5
CCDC47-203ENST00000580986 RPTORQ8N122 1335 aa11.91□□□□□ -0.5
CCDC47-203ENST00000580986 CFBP00751 764 aa11.91□□□□□ -0.5
CCDC47-203ENST00000580986 HSPA1AP0DMV8 641 aaKnown RBP11.91□□□□□ -0.5
CCDC47-203ENST00000580986 HSPA1BP0DMV9 641 aaKnown RBP11.91□□□□□ -0.5
CCDC47-203ENST00000580986 HSPA8P11142 646 aaKnown RBP11.91□□□□□ -0.5
CCDC47-203ENST00000580986 U2AF2P26368 475 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCDC47-203ENST00000580986 CTGFP29279 349 aa11.91□□□□□ -0.5
CCDC47-203ENST00000580986 KRT2P35908 639 aa11.91□□□□□ -0.5
CCDC47-203ENST00000580986 RGS2P41220 211 aa11.91□□□□□ -0.5
CCDC47-203ENST00000580986 MAP2K5Q13163 448 aa11.91□□□□□ -0.5
CCDC47-203ENST00000580986 BAATQ14032 418 aaPredicted RBP11.91□□□□□ -0.5
CCDC47-203ENST00000580986 ZNF792Q3KQV3 632 aa11.91□□□□□ -0.5
CCDC47-203ENST00000580986 XRRA1Q6P2D8 792 aa11.91□□□□□ -0.5
CCDC47-203ENST00000580986 MAMDC4Q6UXC1 1216 aa11.91□□□□□ -0.5
CCDC47-203ENST00000580986 NSMFQ6X4W1 530 aa11.91□□□□□ -0.5
CCDC47-203ENST00000580986 TRMT44Q8IYL2 757 aaKnown RBP11.91□□□□□ -0.5
CCDC47-203ENST00000580986 SYTL5Q8TDW5 730 aaPredicted RBP11.91□□□□□ -0.5
CCDC47-203ENST00000580986 MORC4Q8TE76 937 aa11.91□□□□□ -0.5
CCDC47-203ENST00000580986 IWS1Q96ST2 819 aa11.91□□□□□ -0.5
CCDC47-203ENST00000580986 APBA2Q99767 749 aa11.91□□□□□ -0.5
CCDC47-203ENST00000580986 EHMT1Q9H9B1 1298 aa11.91□□□□□ -0.5
CCDC47-203ENST00000580986 LRRC37A2A6NM11 1700 aa11.91□□□□□ -0.5
CCDC47-203ENST00000580986 ZSWIM8A7E2V4 1837 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 SPDYE3A6NKU9 549 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 B4DLN1 442 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 STX6O43752 255 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 STAM2O75886 525 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 IGHA2P01877 340 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 TAL1P17542 331 aaPredicted RBP11.9□□□□□ -0.5
CCDC47-203ENST00000580986 SYT1P21579 422 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 EDNRBP24530 442 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 DDIT3P35638 169 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 SREBF1P36956 1147 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 WDR78Q5VTH9 848 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 OLFML2BQ68BL8 750 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 USP17L6PQ6QN14 398 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 SLC30A10Q6XR72 485 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 KRT25Q7Z3Z0 450 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 DIS3L2Q8IYB7 885 aaKnown RBP11.9□□□□□ -0.5
CCDC47-203ENST00000580986 DOCK3Q8IZD9 2030 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 NSUN6Q8TEA1 469 aaKnown RBP11.9□□□□□ -0.5
CCDC47-203ENST00000580986 CRYGNQ8WXF5 182 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 TNFRSF25Q93038 417 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 IPO9Q96P70 1041 aaKnown RBP11.9□□□□□ -0.5
CCDC47-203ENST00000580986 MPHOSPH6Q99547 160 aaKnown RBP11.9□□□□□ -0.5
CCDC47-203ENST00000580986 DAXXQ9UER7 740 aaPredicted RBP11.9□□□□□ -0.5
CCDC47-203ENST00000580986 SRRDQ9UH36 339 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 KCNJ14Q9UNX9 436 aa11.9□□□□□ -0.5
CCDC47-203ENST00000580986 SYNGAP1Q96PV0 1343 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 H3BQV1 296 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 FOXN1O15353 648 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 SLC4A3P48751 1232 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 ALDH5A1P51649 535 aaPredicted RBP11.89□□□□□ -0.51
CCDC47-203ENST00000580986 IFFO2Q5TF58 517 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 BRAPQ7Z569 592 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 CD99L2Q8TCZ2 262 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 PXYLP1Q8TE99 480 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 TBC1D5Q92609 795 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 FGD4Q96M96 766 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 RMDN3Q96TC7 470 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 ARHGAP39Q9C0H5 1083 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 PXMP2Q9NR77 195 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 GJB4Q9NTQ9 266 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 COL20A1Q9P218 1284 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms