RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ASXL2Q76L83 1435 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 ZNF561-AS1K7EIQ3 104 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 CBX4O00257 560 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 GLI4P10075 376 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 ITGB5P18084 799 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 SDHAP31040 664 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 CAP1Q01518 475 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 EGR3Q06889 387 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 CHRNA2Q15822 529 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 CREB3L3Q68CJ9 461 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 HHIPL2Q6UWX4 724 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 RPUSD2Q8IZ73 545 aaKnown RBP2.48□□□□□ -2.01
HIF1A-212ENST00000557538 OXR1Q8N573 874 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 CHAC2Q8WUX2 184 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 ZDHHC15Q96MV8 337 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 FOXP3Q9BZS1 431 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 CWC22Q9HCG8 908 aaKnown RBP2.48□□□□□ -2.01
HIF1A-212ENST00000557538 TMEM59LQ9UK28 342 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.48□□□□□ -2.01
HIF1A-212ENST00000557538 SUGT1Q9Y2Z0 365 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 NPHP3-ACAD11A0A0J9YXS1 232 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 C7orf72A4D263 438 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 PPP1R11O60927 126 aaPredicted RBP2.47□□□□□ -2.01
HIF1A-212ENST00000557538 CD3EP07766 207 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 GSTM1P09488 218 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 CD8BP10966 210 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 SEPHS1P49903 392 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 RPL11P62913 178 aaKnown RBP2.47□□□□□ -2.01
HIF1A-212ENST00000557538 YBX1P67809 324 aaKnown RBP2.47□□□□□ -2.01
HIF1A-212ENST00000557538 PPP2R5DQ14738 602 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 MROH9Q5TGP6 573 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 ZCCHC8Q6NZY4 707 aaKnown RBP2.47□□□□□ -2.01
HIF1A-212ENST00000557538 CREG2Q8IUH2 290 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 PPIL6Q8IXY8 311 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 FAM181AQ8N9Y4 354 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 PCDH19Q8TAB3 1148 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 PHOSPHO1Q8TCT1 267 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 GPATCH3Q96I76 525 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 ALPK1Q96QP1 1244 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 LRRC4CQ9HCJ2 640 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 EBF1Q9UH73 591 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 ZNF652Q9Y2D9 606 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 SPEF1Q9Y4P9 236 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 COL4A3BPQ9Y5P4 624 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 TRAF5O00463 557 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 GSTA4O15217 222 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 BRINP1O60477 761 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 ZBTB7AO95365 584 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 F2P00734 622 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 IFNGR1P15260 489 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 LSSP48449 732 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 PHC1P78364 1004 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 GPR19Q15760 415 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 INF2Q27J81 1249 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 ARTNQ5T4W7 220 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 UBE2R2Q712K3 238 aaPredicted RBP2.47□□□□□ -2.01
HIF1A-212ENST00000557538 BRAPQ7Z569 592 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 LRRTM3Q86VH5 581 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 UHMK1Q8TAS1 419 aaKnown RBP2.47□□□□□ -2.01
HIF1A-212ENST00000557538 MBNL3Q9NUK0 354 aaKnown RBP2.47□□□□□ -2.01
HIF1A-212ENST00000557538 FAM86C2PA6NEL3 165 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 ALG1L2C9J202 215 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 CLASP2O75122 1294 aaKnown RBP2.47□□□□□ -2.01
HIF1A-212ENST00000557538 RAPGEF3O95398 923 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 HSP90B1P14625 803 aaKnown RBP2.47□□□□□ -2.01
HIF1A-212ENST00000557538 PAK1Q13153 545 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 MBLAC2Q68D91 279 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 MAGEB10Q96LZ2 347 aaPredicted RBP2.47□□□□□ -2.01
HIF1A-212ENST00000557538 MENTQ9BUN1 341 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 PHF20Q9BVI0 1012 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 EPB41L1Q9H4G0 881 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 NUB1Q9Y5A7 615 aa2.47□□□□□ -2.01
HIF1A-212ENST00000557538 SSU72P8A0A1W2PR75 194 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 HYAL3O43820 417 aaPredicted RBP2.46□□□□□ -2.02
HIF1A-212ENST00000557538 IKZF1Q13422 519 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 RNF219Q5W0B1 726 aaPredicted RBP2.46□□□□□ -2.02
HIF1A-212ENST00000557538 CC2D1AQ6P1N0 951 aaPredicted RBP2.46□□□□□ -2.02
HIF1A-212ENST00000557538 OTOP3Q7RTS5 596 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 ATG4DQ86TL0 474 aaPredicted RBP2.46□□□□□ -2.02
HIF1A-212ENST00000557538 IRF2BP1Q8IU81 584 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 FBXW5Q969U6 566 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 JMJD8Q96S16 334 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 CARS2Q9HA77 564 aaKnown RBP2.46□□□□□ -2.02
HIF1A-212ENST00000557538 METTL14Q9HCE5 456 aaKnown RBP2.46□□□□□ -2.02
HIF1A-212ENST00000557538 PCDH18Q9HCL0 1135 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 TNFRSF12AQ9NP84 129 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 PDLIM7Q9NR12 457 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 AP5S1Q9NUS5 200 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 TNPO3Q9Y5L0 923 aaKnown RBP2.46□□□□□ -2.02
HIF1A-212ENST00000557538 WASH4PA8MWX3 477 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 ABLIM1O14639 778 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 MYO1BO43795 1136 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 FURINP09958 794 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 ECI1P42126 302 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 FNTBP49356 437 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 SLC9A5Q14940 896 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 NR1I3Q14994 352 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 RGL3Q3MIN7 710 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 CDKAL1Q5VV42 579 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms