RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 STAG1Q8WVM7 1258 aa7.29□□□□□ -1.24
SYNE2-210ENST00000553455 DPF3Q92784 378 aa7.29□□□□□ -1.24
SYNE2-210ENST00000553455 SLC5A6Q9Y289 635 aa7.29□□□□□ -1.24
SYNE2-210ENST00000553455 ATP8A1Q9Y2Q0 1164 aa7.29□□□□□ -1.24
SYNE2-210ENST00000553455 B4E1Z4 1266 aa7.28□□□□□ -1.24
SYNE2-210ENST00000553455 WNT9AO14904 365 aa7.28□□□□□ -1.24
SYNE2-210ENST00000553455 ZP2Q05996 745 aa7.28□□□□□ -1.24
SYNE2-210ENST00000553455 RALGPS1Q5JS13 557 aa7.28□□□□□ -1.24
SYNE2-210ENST00000553455 ANGEL2Q5VTE6 544 aaKnown RBP7.28□□□□□ -1.24
SYNE2-210ENST00000553455 HLA-DQA1Q5Y7H0 255 aa7.28□□□□□ -1.24
SYNE2-210ENST00000553455 CDCA2Q69YH5 1023 aaPredicted RBP7.28□□□□□ -1.24
SYNE2-210ENST00000553455 DDX42Q86XP3 938 aaKnown RBP eCLIP7.28□□□□□ -1.24
SYNE2-210ENST00000553455 DTX1Q86Y01 620 aa7.28□□□□□ -1.24
SYNE2-210ENST00000553455 AHI1Q8N157 1196 aa7.28□□□□□ -1.24
SYNE2-210ENST00000553455 LEO1Q8WVC0 666 aaPredicted RBP7.28□□□□□ -1.24
SYNE2-210ENST00000553455 JMJD8Q96S16 334 aa7.28□□□□□ -1.24
SYNE2-210ENST00000553455 ADAMTS10Q9H324 1103 aa7.28□□□□□ -1.24
SYNE2-210ENST00000553455 TNFRSF10DQ9UBN6 386 aa7.28□□□□□ -1.24
SYNE2-210ENST00000553455 TIMM13Q9Y5L4 95 aaPredicted RBP7.28□□□□□ -1.24
SYNE2-210ENST00000553455 KIAA1324LA8MWY0 1029 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-210ENST00000553455 PPP1R11O60927 126 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-210ENST00000553455 GLRX3O76003 335 aaKnown RBP7.27□□□□□ -1.25
SYNE2-210ENST00000553455 NPTXRO95502 500 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 EYA4O95677 639 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 SOD2P04179 222 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 BCL6P41182 706 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 CD97P48960 835 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 NEK4P51957 841 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 NFKB2Q00653 900 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 PAK1Q13153 545 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 CFAP100Q494V2 611 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 CT47A1Q5JQC4 288 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-210ENST00000553455 PIK3R6Q5UE93 754 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 VSIG10LQ86VR7 867 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 Q8N1Y9 231 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 PRPF38AQ8NAV1 312 aaKnown RBP7.27□□□□□ -1.25
SYNE2-210ENST00000553455 ALPK1Q96QP1 1244 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 ORAI3Q9BRQ5 295 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 ALG1Q9BT22 464 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 IPPKQ9H8X2 491 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 SLAMF8Q9P0V8 285 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 SAMD15Q9P1V8 674 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 CCDC39Q9UFE4 941 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 COQ6Q9Y2Z9 468 aa7.27□□□□□ -1.25
SYNE2-210ENST00000553455 MYO1BO43795 1136 aa7.26□□□□□ -1.25
SYNE2-210ENST00000553455 NPHS1O60500 1241 aa7.26□□□□□ -1.25
SYNE2-210ENST00000553455 RAB11FIP3O75154 756 aa7.26□□□□□ -1.25
SYNE2-210ENST00000553455 USP2O75604 605 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-210ENST00000553455 CDK11BP21127 795 aaKnown RBP7.26□□□□□ -1.25
SYNE2-210ENST00000553455 GRK2P25098 689 aa7.26□□□□□ -1.25
SYNE2-210ENST00000553455 GRK3P35626 688 aa7.26□□□□□ -1.25
SYNE2-210ENST00000553455 FLT3P36888 993 aa7.26□□□□□ -1.25
SYNE2-210ENST00000553455 KIR2DL1P43626 348 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-210ENST00000553455 KIR2DL2P43627 348 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-210ENST00000553455 RPL11P62913 178 aaKnown RBP7.26□□□□□ -1.25
SYNE2-210ENST00000553455 LSAMPQ13449 338 aa7.26□□□□□ -1.25
SYNE2-210ENST00000553455 ANKLE2Q86XL3 938 aa7.26□□□□□ -1.25
SYNE2-210ENST00000553455 ZC3H7AQ8IWR0 971 aaKnown RBP7.26□□□□□ -1.25
SYNE2-210ENST00000553455 IGSF22Q8N9C0 903 aa7.26□□□□□ -1.25
SYNE2-210ENST00000553455 CELF4Q9BZC1 486 aaKnown RBP7.26□□□□□ -1.25
SYNE2-210ENST00000553455 PRDM7Q9NQW5 492 aa7.26□□□□□ -1.25
SYNE2-210ENST00000553455 DDX56Q9NY93 547 aaKnown RBP7.26□□□□□ -1.25
SYNE2-210ENST00000553455 TMEM59LQ9UK28 342 aa7.26□□□□□ -1.25
SYNE2-210ENST00000553455 A0A1W2PQ45 241 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-210ENST00000553455 A0A1W2PQY0 241 aa7.25□□□□□ -1.25
SYNE2-210ENST00000553455 NOTOA8MTQ0 251 aa7.25□□□□□ -1.25
SYNE2-210ENST00000553455 CBX4O00257 560 aa7.25□□□□□ -1.25
SYNE2-210ENST00000553455 SRGAP2CP0DJJ0 459 aa7.25□□□□□ -1.25
SYNE2-210ENST00000553455 GTF2A2P52657 109 aa7.25□□□□□ -1.25
SYNE2-210ENST00000553455 EVA1CP58658 441 aa7.25□□□□□ -1.25
SYNE2-210ENST00000553455 DUSP4Q13115 394 aa7.25□□□□□ -1.25
SYNE2-210ENST00000553455 DHCR24Q15392 516 aa7.25□□□□□ -1.25
SYNE2-210ENST00000553455 SKOR2Q2VWA4 1001 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-210ENST00000553455 UBE2R2Q712K3 238 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-210ENST00000553455 DDX46Q7L014 1031 aaKnown RBP7.25□□□□□ -1.25
SYNE2-210ENST00000553455 DDX53Q86TM3 631 aaKnown RBP7.25□□□□□ -1.25
SYNE2-210ENST00000553455 PAK6Q9NQU5 681 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-210ENST00000553455 GULP1Q9UBP9 304 aa7.25□□□□□ -1.25
SYNE2-210ENST00000553455 FBLN5Q9UBX5 448 aa7.25□□□□□ -1.25
SYNE2-210ENST00000553455 M0R2C6 588 aa7.24□□□□□ -1.25
SYNE2-210ENST00000553455 EFEMP2O95967 443 aa7.24□□□□□ -1.25
SYNE2-210ENST00000553455 FUT4P22083 530 aa7.24□□□□□ -1.25
SYNE2-210ENST00000553455 FPR2P25090 351 aa7.24□□□□□ -1.25
SYNE2-210ENST00000553455 SSTR4P31391 388 aa7.24□□□□□ -1.25
SYNE2-210ENST00000553455 MECP2P51608 486 aaKnown RBP7.24□□□□□ -1.25
SYNE2-210ENST00000553455 STRN3Q13033 797 aa7.24□□□□□ -1.25
SYNE2-210ENST00000553455 HSF5Q4G112 596 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-210ENST00000553455 TMEM177Q53S58 311 aa7.24□□□□□ -1.25
SYNE2-210ENST00000553455 OVCH1Q7RTY7 1134 aa7.24□□□□□ -1.25
SYNE2-210ENST00000553455 NLGN2Q8NFZ4 835 aa7.24□□□□□ -1.25
SYNE2-210ENST00000553455 WNK4Q96J92 1243 aa7.24□□□□□ -1.25
SYNE2-210ENST00000553455 MTA3Q9BTC8 594 aa7.24□□□□□ -1.25
SYNE2-210ENST00000553455 C19orf73Q9NVV2 129 aa7.24□□□□□ -1.25
SYNE2-210ENST00000553455 CLDND1Q9NY35 253 aa7.24□□□□□ -1.25
SYNE2-210ENST00000553455 CCDC66A2RUB6 948 aa7.23□□□□□ -1.25
SYNE2-210ENST00000553455 ZNF891A8MT65 544 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-210ENST00000553455 FAM47E-STBD1D6RA91 191 aa7.23□□□□□ -1.25
SYNE2-210ENST00000553455 H7BY64 318 aa7.23□□□□□ -1.25
SYNE2-210ENST00000553455 TRAF5O00463 557 aa7.23□□□□□ -1.25
SYNE2-210ENST00000553455 PYGMP11217 842 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms