RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 HSP90AB2PQ58FF8 381 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 TMEM240Q5SV17 173 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 MAP3K21Q5TCX8 1036 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 PSRC1Q6PGN9 363 aaPredicted RBP3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 ZNF513Q8N8E2 541 aaPredicted RBP3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 NEK9Q8TD19 979 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 DDX1Q92499 740 aaKnown RBP3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 ASIC4Q96FT7 647 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 COG3Q96JB2 828 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 GMLQ99445 158 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 PARK7Q99497 189 aaKnown RBP3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 EYA3Q99504 573 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 LPIN3Q9BQK8 851 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 DBNDD2Q9BQY9 259 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 TEX13AQ9BXU3 409 aaPredicted RBP3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 ZC3H12CQ9C0D7 883 aaKnown RBP3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 SMG9Q9H0W8 520 aaKnown RBP3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 CLMPQ9H6B4 373 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 CERS4Q9HA82 394 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 TMEM39AQ9NV64 488 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 HCN2Q9UL51 889 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 HIF3AQ9Y2N7 669 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 PCDHGC5Q9Y5F6 944 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 COL4A4P53420 1690 aaPredicted RBP3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 ASXL3Q9C0F0 2248 aa3.03□□□□□ -1.93
TRAV1-1-201ENST00000542354 CENPJQ9HC77 1338 aaPredicted RBP3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 SETD2Q9BYW2 2564 aaPredicted RBP3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 DCDC2CA8MYV0 355 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 F8W735 103 aaPredicted RBP3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 H3BQ06 376 aaPredicted RBP3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 PIK3CDO00329 1044 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 SART1O43290 800 aaKnown RBP3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 SMNDC1O75940 238 aaKnown RBP eCLIP3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 TAL1P17542 331 aaPredicted RBP3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 IDH3AP50213 366 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 RABGGTBP53611 331 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 GRB10Q13322 594 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 MCM6Q14566 821 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 SNX17Q15036 470 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 TMEM67Q5HYA8 995 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 PERM1Q5SV97 790 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 NBPF12Q5TAG4 269 aaPredicted RBP3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZNF365Q70YC5 407 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 HDGFL2Q7Z4V5 671 aaPredicted RBP3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 ERO1BQ86YB8 467 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 IL22RA1Q8N6P7 574 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 SLC44A5Q8NCS7 719 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 ARRDC4Q8NCT1 418 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZNF280CQ8ND82 737 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 SCG3Q8WXD2 468 aaKnown RBP3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 ARNTL2Q8WYA1 636 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 UTP4Q969X6 686 aaKnown RBP3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 MEGF10Q96KG7 1140 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 RIPOR3Q96MK2 946 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 NAGPAQ9UK23 515 aa3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 FNDC3AQ9Y2H6 1198 aaKnown RBP3.02□□□□□ -1.93
TRAV1-1-201ENST00000542354 RPAP1Q9BWH6 1393 aaPredicted RBP3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 STXBP3O00186 592 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 MSCO60682 206 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 SASH1O94885 1247 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 TIMP1P01033 207 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 FGBP02675 491 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 MYOGP15173 224 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 RASA1P20936 1047 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 TNNT2P45379 298 aaPredicted RBP3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZNF200P98182 395 aaPredicted RBP3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 CACNB2Q08289 660 aaPredicted RBP3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 NFIAQ12857 509 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 VGLL4Q14135 290 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 RRP1BQ14684 758 aaKnown RBP3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 RRS1Q15050 365 aaKnown RBP3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 C11orf91Q3C1V1 193 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 PLEKHO1Q53GL0 409 aaPredicted RBP3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 C1orf141Q5JVX7 400 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 N4BP2L1Q5TBK1 243 aaPredicted RBP3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 MFSD5Q6N075 450 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZC3H14Q6PJT7 736 aaKnown RBP3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 Q6ZS46 218 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 C16orf59Q7L2K0 433 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZFPM1Q8IX07 1006 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 DEPDC4Q8N2C3 294 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 TMEM199Q8N511 208 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 TMEM105Q8N8V8 129 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 KLHL23Q8NBE8 558 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 LPAR1Q92633 364 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 SECISBP2LQ93073 1101 aaKnown RBP3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 PLD4Q96BZ4 506 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZNF594Q96JF6 807 aaPredicted RBP3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 BBC3Q96PG8 261 aaPredicted RBP3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 TLR7Q9NYK1 1049 aaKnown RBP3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 NCDNQ9UBB6 729 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 PPME1Q9Y570 386 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 MAST2Q6P0Q8 1798 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 LOC400499M0QZD8 3231 aa3.01□□□□□ -1.93
TRAV1-1-201ENST00000542354 CLRN2A0PK11 232 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 EPOPA6NHQ4 379 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 KBTBD13C9JR72 458 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 SLC30A4O14863 429 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 MYO1BO43795 1136 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms