RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, human

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD4-205	ENST00000536301	FBXO22	Q8NEZ5	403 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	KAT2B	Q92831	832 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	MKL1	Q969V6	931 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	RAD9A	Q99638	391 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	SEZ6L	Q9BYH1	1024 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	KCNH6	Q9H252	994 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	MKNK2	Q9HBH9	465 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	MTMR4	Q9NYA4	1195 aa		6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	TPR	P12270	2363 aa	Known RBP	6.24	□□□□□ -1.41
CHD4-205	ENST00000536301	COL4A6	Q14031	1691 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	KIAA1217	Q5T5P2	1943 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	IPO8	O15397	1037 aa	Known RBP	6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	ST18	O60284	1047 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	GFRA3	O60609	400 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	LGR5	O75473	907 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	CSPG5	O95196	566 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	CKB	P12277	381 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	MCC	P23508	829 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	STAT2	P52630	851 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	VCP	P55072	806 aa	Known RBP	6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	ZNF200	P98182	395 aa	Predicted RBP	6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	MKRN4P	Q13434	485 aa	Predicted RBP	6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	BFSP2	Q13515	415 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	COL19A1	Q14993	1142 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	UBE3C	Q15386	1083 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	PTGIS	Q16647	500 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	TRIM71	Q2Q1W2	868 aa	Known RBP	6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	EPC2	Q52LR7	807 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	SBK1	Q52WX2	424 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	TTBK2	Q6IQ55	1244 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	NFRKB	Q6P4R8	1299 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	CNKSR3	Q6P9H4	555 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	RPAIN	Q86UA6	219 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	RNF135	Q8IUD6	432 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	ITPRIP	Q8IWB1	547 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	ADHFE1	Q8IWW8	467 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	BANK1	Q8NDB2	785 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	GMCL1P1	Q8NEA9	526 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	OSBP2	Q969R2	916 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	PABPC5	Q96DU9	382 aa	Known RBP	6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	MRPL38	Q96DV4	380 aa	Known RBP	6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	STRBP	Q96SI9	672 aa	Known RBP	6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	INCENP	Q9NQS7	918 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	CLDND1	Q9NY35	253 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	ARPP21	Q9UBL0	812 aa	Predicted RBP	6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	PRR12	Q9ULL5	1215 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	MTMR7	Q9Y216	660 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	CACNA1G	O43497	2377 aa		6.23	□□□□□ -1.41
CHD4-205	ENST00000536301	RALGAPA2	Q2PPJ7	1873 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	PLIN4	Q96Q06	1357 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	TMEM221	A6NGB7	291 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301		A6NJR5	290 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301		M0R296	226 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301		M0R2C6	588 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	LINC01565	O15544	149 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	MBTPS2	O43462	519 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	NMT2	O60551	498 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	TBX10	O75333	385 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	TTLL1	O95922	423 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	SELP	P16109	830 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	SLC16A2	P36021	539 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	CPT1A	P50416	773 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	HTRA4	P83105	476 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	IK	Q13123	557 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	GPM6B	Q13491	265 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	TKFC	Q3LXA3	575 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	HERC4	Q5GLZ8	1057 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	ZNF618	Q5T7W0	954 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	ZKSCAN2	Q63HK3	967 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	SIRT2	Q8IXJ6	389 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	AMOTL1	Q8IY63	956 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	MYOCD	Q8IZQ8	938 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	SP7	Q8TDD2	431 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	AFAP1L1	Q8TED9	768 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	AFG1L	Q8WV93	481 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	STAG1	Q8WVM7	1258 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	CLEC4D	Q8WXI8	215 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	MFSD14A	Q96MC6	490 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	CRBN	Q96SW2	442 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	HAUS7	Q99871	368 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	GPHN	Q9NQX3	736 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	HDAC6	Q9UBN7	1215 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	CCPG1	Q9ULG6	757 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	NOD1	Q9Y239	953 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	EP300	Q09472	2414 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	SPTBN2	O15020	2390 aa		6.22	□□□□□ -1.41
CHD4-205	ENST00000536301	KIAA1671	Q9BY89	1806 aa		6.21	□□□□□ -1.42
CHD4-205	ENST00000536301	ABHD14A-ACY1	A0A1B0GW23	586 aa		6.21	□□□□□ -1.42
CHD4-205	ENST00000536301	MMP3	P08254	477 aa		6.21	□□□□□ -1.42
CHD4-205	ENST00000536301	IFIT2	P09913	472 aa	Known RBP	6.21	□□□□□ -1.42
CHD4-205	ENST00000536301	LINC00271	P0C7V0	271 aa		6.21	□□□□□ -1.42
CHD4-205	ENST00000536301	ATP5J	P18859	108 aa		6.21	□□□□□ -1.42
CHD4-205	ENST00000536301	EDNRB	P24530	442 aa		6.21	□□□□□ -1.42
CHD4-205	ENST00000536301	CALML3	P27482	149 aa		6.21	□□□□□ -1.42
CHD4-205	ENST00000536301	SLC1A4	P43007	532 aa		6.21	□□□□□ -1.42
CHD4-205	ENST00000536301	PTPN5	P54829	565 aa		6.21	□□□□□ -1.42
CHD4-205	ENST00000536301	PTPN11	Q06124	597 aa	Predicted RBP	6.21	□□□□□ -1.42
CHD4-205	ENST00000536301	ARHGAP1	Q07960	439 aa		6.21	□□□□□ -1.42
CHD4-205	ENST00000536301	RBL2	Q08999	1139 aa		6.21	□□□□□ -1.42
CHD4-205	ENST00000536301	HYAL1	Q12794	435 aa		6.21	□□□□□ -1.42

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