RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 PDE2AO00408 941 aaPredicted RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 PJA2O43164 708 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 SRGAP2O75044 1071 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 TNFRSF8P28908 595 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 KIF5AQ12840 1032 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 MAN2A1Q16706 1144 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 LETM2Q2VYF4 491 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 TMEM119Q4V9L6 283 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 LRRC55Q6ZSA7 311 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 ZNF804AQ7Z570 1209 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 CREG2Q8IUH2 290 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 REXO1Q8N1G1 1221 aaKnown RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 TBCKQ8TEA7 893 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 AENQ8WTP8 325 aaKnown RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 TGFBRAP1Q8WUH2 860 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 CALML4Q96GE6 196 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 FAM163AQ96GL9 167 aaPredicted RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 PLIN2Q99541 437 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 ARFGEF1Q9Y6D6 1849 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 RBAK-RBAKDNI3L0D1 243 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 PES1O00541 588 aaKnown RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 FGFR1OPO95684 399 aaKnown RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 CDK8P49336 464 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 MAPK8IP2Q13387 824 aaPredicted RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 PDIA5Q14554 519 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 DIXDC1Q155Q3 683 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 GRIK5Q16478 980 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 ASTE1Q2TB18 679 aaPredicted RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 CCNI2Q6ZMN8 369 aaPredicted RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 LEKR1Q6ZMV7 388 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 SV2BQ7L1I2 683 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 CCDC84Q86UT8 332 aaPredicted RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 POTEDQ86YR6 584 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 PROM2Q8N271 834 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 CCDC155Q8N6L0 562 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 BAP1Q92560 729 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 CCDC42Q96M95 316 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 PNMA5Q96PV4 448 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 EYA3Q99504 573 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 NDST4Q9H3R1 872 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 ARHGAP20Q9P2F6 1191 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 SEC63Q9UGP8 760 aaKnown RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 SRP68Q9UHB9 627 aaKnown RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 STX8Q9UNK0 236 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 MYH7BA7E2Y1 1941 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 GAKO14976 1311 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 MYMKA6NI61 221 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 NKRFO15226 690 aaKnown RBP eCLIP7.41□□□□□ -1.22
CDH12-203ENST00000517378 USO1O60763 962 aaKnown RBP7.41□□□□□ -1.22
CDH12-203ENST00000517378 RNF40O75150 1001 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 SNHG28P0DPA3 235 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 IDEP14735 1019 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 PLCG2P16885 1265 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 TECP42680 631 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 KIF11P52732 1056 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 PSMD2Q13200 908 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 SEPT2Q15019 361 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 SPA17Q15506 151 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 SLC4A8Q2Y0W8 1093 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 PPP1R18Q6NYC8 613 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 LARP4BQ92615 738 aaKnown RBP7.41□□□□□ -1.22
CDH12-203ENST00000517378 CCDC102AQ96A19 550 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 IFIH1Q9BYX4 1025 aaKnown RBP7.41□□□□□ -1.22
CDH12-203ENST00000517378 LRRC27Q9C0I9 530 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 PCDHA13Q9Y5I0 950 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 CAPN6Q9Y6Q1 641 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 DUSP10Q9Y6W6 482 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 SSU72P8A0A1W2PR75 194 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 EPHB6O15197 1021 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 EDIL3O43854 480 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 SHOX2O60902 331 aaPredicted RBP7.41□□□□□ -1.22
CDH12-203ENST00000517378 ZPR1O75312 459 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 TACC1O75410 805 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 CLSTN1O94985 981 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 GOLGA8HP0CJ92 632 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 IL1R1P14778 569 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 TCP1P17987 556 aaKnown RBP7.41□□□□□ -1.22
CDH12-203ENST00000517378 BTDP43251 543 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 SF3B2Q13435 895 aaKnown RBP7.41□□□□□ -1.22
CDH12-203ENST00000517378 ZCWPW2Q504Y3 356 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 SOGA3Q5TF21 947 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 SRLQ86TD4 932 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 RAD54LQ92698 747 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 SYN2Q92777 582 aaPredicted RBP7.41□□□□□ -1.22
CDH12-203ENST00000517378 SELENOOQ9BVL4 669 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 FAM204AQ9H8W3 233 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 RIC8AQ9NPQ8 531 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 TMEM51Q9NW97 253 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 LRWD1Q9UFC0 647 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 FEZ2Q9UHY8 353 aaPredicted RBP7.41□□□□□ -1.22
CDH12-203ENST00000517378 FAM184BQ9ULE4 1060 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 JAG2Q9Y219 1238 aa7.41□□□□□ -1.22
CDH12-203ENST00000517378 AGPSO00116 658 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 ZNF185O15231 689 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 SLC26A4O43511 780 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 PLEKP08567 350 aaPredicted RBP7.4□□□□□ -1.22
CDH12-203ENST00000517378 MYBL2P10244 700 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 PDHBP11177 359 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 RHBDL3P58872 404 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 CYP27A1Q02318 531 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms