RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 LHFPL2Q6ZUX7 228 aa8.33□□□□□ -1.08
VPS50-212ENST00000476413 DDX46Q7L014 1031 aaKnown RBP8.33□□□□□ -1.08
VPS50-212ENST00000476413 NLRP10Q86W26 655 aa8.33□□□□□ -1.08
VPS50-212ENST00000476413 ANKLE2Q86XL3 938 aa8.33□□□□□ -1.08
VPS50-212ENST00000476413 NAT16Q8N8M0 369 aa8.33□□□□□ -1.08
VPS50-212ENST00000476413 BCL7CQ8WUZ0 217 aaPredicted RBP8.33□□□□□ -1.08
VPS50-212ENST00000476413 MISP3Q96FF7 219 aa8.33□□□□□ -1.08
VPS50-212ENST00000476413 HHIPL1Q96JK4 782 aa8.33□□□□□ -1.08
VPS50-212ENST00000476413 IRF2BPLQ9H1B7 796 aa8.33□□□□□ -1.08
VPS50-212ENST00000476413 CARS2Q9HA77 564 aaKnown RBP8.33□□□□□ -1.08
VPS50-212ENST00000476413 COQ6Q9Y2Z9 468 aa8.33□□□□□ -1.08
VPS50-212ENST00000476413 FADS2P1A8MWK0 482 aa8.32□□□□□ -1.08
VPS50-212ENST00000476413 CBX4O00257 560 aa8.32□□□□□ -1.08
VPS50-212ENST00000476413 PPP1R11O60927 126 aaPredicted RBP8.32□□□□□ -1.08
VPS50-212ENST00000476413 ITGB7P26010 798 aa8.32□□□□□ -1.08
VPS50-212ENST00000476413 NFXL1Q6ZNB6 911 aa8.32□□□□□ -1.08
VPS50-212ENST00000476413 ZC3H7AQ8IWR0 971 aaKnown RBP8.32□□□□□ -1.08
VPS50-212ENST00000476413 Q8N1Y9 231 aa8.32□□□□□ -1.08
VPS50-212ENST00000476413 IGSF22Q8N9C0 903 aa8.32□□□□□ -1.08
VPS50-212ENST00000476413 MAP6Q96JE9 813 aa8.32□□□□□ -1.08
VPS50-212ENST00000476413 CELF4Q9BZC1 486 aaKnown RBP8.32□□□□□ -1.08
VPS50-212ENST00000476413 IPPKQ9H8X2 491 aa8.32□□□□□ -1.08
VPS50-212ENST00000476413 KLHL42Q9P2K6 505 aa8.32□□□□□ -1.08
VPS50-212ENST00000476413 MCM8Q9UJA3 840 aa8.32□□□□□ -1.08
VPS50-212ENST00000476413 TIMM13Q9Y5L4 95 aaPredicted RBP8.32□□□□□ -1.08
VPS50-212ENST00000476413 SOD2P04179 222 aa8.31□□□□□ -1.08
VPS50-212ENST00000476413 CD8BP10966 210 aa8.31□□□□□ -1.08
VPS50-212ENST00000476413 FLT3P36888 993 aa8.31□□□□□ -1.08
VPS50-212ENST00000476413 BCL6P41182 706 aa8.31□□□□□ -1.08
VPS50-212ENST00000476413 MECP2P51608 486 aaKnown RBP8.31□□□□□ -1.08
VPS50-212ENST00000476413 STRN3Q13033 797 aa8.31□□□□□ -1.08
VPS50-212ENST00000476413 IKZF1Q13422 519 aa8.31□□□□□ -1.08
VPS50-212ENST00000476413 UBE2R2Q712K3 238 aaPredicted RBP8.31□□□□□ -1.08
VPS50-212ENST00000476413 SPRED2Q7Z698 418 aa8.31□□□□□ -1.08
VPS50-212ENST00000476413 SLCO6A1Q86UG4 719 aa8.31□□□□□ -1.08
VPS50-212ENST00000476413 WNK4Q96J92 1243 aa8.31□□□□□ -1.08
VPS50-212ENST00000476413 JMJD8Q96S16 334 aa8.31□□□□□ -1.08
VPS50-212ENST00000476413 ALG1Q9BT22 464 aa8.31□□□□□ -1.08
VPS50-212ENST00000476413 HOMER2Q9NSB8 354 aa8.31□□□□□ -1.08
VPS50-212ENST00000476413 BSDC1Q9NW68 430 aaPredicted RBP8.31□□□□□ -1.08
VPS50-212ENST00000476413 LMCD1Q9NZU5 365 aa8.31□□□□□ -1.08
VPS50-212ENST00000476413 TRAF5O00463 557 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 MED26O95402 600 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 PRNPP04156 253 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 FURINP09958 794 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 ZGLP1P0C6A0 271 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 SRGAP2CP0DJJ0 459 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 BPIP17213 487 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 GRK2P25098 689 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 GRK3P35626 688 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 DSG1Q02413 1049 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 LSAMPQ13449 338 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 RALGPS1Q5JS13 557 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 OVCH1Q7RTY7 1134 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 DDX53Q86TM3 631 aaKnown RBP8.3□□□□□ -1.08
VPS50-212ENST00000476413 KIF18BQ86Y91 864 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 TNFRSF10DQ9UBN6 386 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 PHLDB1Q86UU1 1377 aa8.3□□□□□ -1.08
VPS50-212ENST00000476413 ZNF891A8MT65 544 aaPredicted RBP8.29□□□□□ -1.08
VPS50-212ENST00000476413 M0R2C6 588 aa8.29□□□□□ -1.08
VPS50-212ENST00000476413 PMLP29590 882 aa8.29□□□□□ -1.08
VPS50-212ENST00000476413 RPL11P62913 178 aaKnown RBP8.29□□□□□ -1.08
VPS50-212ENST00000476413 BRDTQ58F21 947 aaPredicted RBP8.29□□□□□ -1.08
VPS50-212ENST00000476413 HLA-DQA1Q5Y7H0 255 aa8.29□□□□□ -1.08
VPS50-212ENST00000476413 ZNF574Q6ZN55 896 aaPredicted RBP8.29□□□□□ -1.08
VPS50-212ENST00000476413 ADAMTS10Q9H324 1103 aa8.29□□□□□ -1.08
VPS50-212ENST00000476413 SEMA6BQ9H3T3 888 aa8.29□□□□□ -1.08
VPS50-212ENST00000476413 CBLCQ9ULV8 474 aa8.29□□□□□ -1.08
VPS50-212ENST00000476413 LOC100996750A0A140TA64 210 aa8.28□□□□□ -1.08
VPS50-212ENST00000476413 MYO1BO43795 1136 aa8.28□□□□□ -1.08
VPS50-212ENST00000476413 NPHS1O60500 1241 aa8.28□□□□□ -1.08
VPS50-212ENST00000476413 F2P00734 622 aa8.28□□□□□ -1.08
VPS50-212ENST00000476413 PYGMP11217 842 aa8.28□□□□□ -1.08
VPS50-212ENST00000476413 YBX3P16989 372 aaKnown RBP eCLIP8.28□□□□□ -1.08
VPS50-212ENST00000476413 STAT4Q14765 748 aa8.28□□□□□ -1.08
VPS50-212ENST00000476413 TMEM177Q53S58 311 aa8.28□□□□□ -1.08
VPS50-212ENST00000476413 FERMT3Q86UX7 667 aa8.28□□□□□ -1.08
VPS50-212ENST00000476413 STK11IPQ8N1F8 1099 aa8.28□□□□□ -1.08
VPS50-212ENST00000476413 NXPE1Q8N323 547 aa8.28□□□□□ -1.08
VPS50-212ENST00000476413 ATL2Q8NHH9 583 aa8.28□□□□□ -1.08
VPS50-212ENST00000476413 MTA3Q9BTC8 594 aa8.28□□□□□ -1.08
VPS50-212ENST00000476413 KRTAP4-6Q9BYQ5 205 aa8.28□□□□□ -1.08
VPS50-212ENST00000476413 GULP1Q9UBP9 304 aa8.28□□□□□ -1.08
VPS50-212ENST00000476413 FBLN5Q9UBX5 448 aa8.28□□□□□ -1.08
VPS50-212ENST00000476413 CCDC66A2RUB6 948 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 NOTOA8MTQ0 251 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 FAM47E-STBD1D6RA91 191 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 NEMP1O14524 444 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 GPR39O43194 453 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 USP2O75604 605 aaPredicted RBP8.27□□□□□ -1.09
VPS50-212ENST00000476413 EFEMP2O95967 443 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 IGHA1P01876 353 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 FPR2P25090 351 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 KIR2DL1P43626 348 aaPredicted RBP8.27□□□□□ -1.09
VPS50-212ENST00000476413 KIR2DL2P43627 348 aaPredicted RBP8.27□□□□□ -1.09
VPS50-212ENST00000476413 ID4P47928 161 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 GTF2A2P52657 109 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 FAM50AQ14320 339 aaKnown RBP8.27□□□□□ -1.09
VPS50-212ENST00000476413 INTS5Q6P9B9 1019 aaKnown RBP8.27□□□□□ -1.09
VPS50-212ENST00000476413 C16orf59Q7L2K0 433 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms