RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 RCC1LQ96I51 464 aaKnown RBP6.05□□□□□ -1.44
LINC00393-202ENST00000452852 MCMBPQ9BTE3 642 aa6.05□□□□□ -1.44
LINC00393-202ENST00000452852 CHMP4AQ9BY43 222 aa6.05□□□□□ -1.44
LINC00393-202ENST00000452852 EPB41L4BQ9H329 900 aa6.05□□□□□ -1.44
LINC00393-202ENST00000452852 FANCLQ9NW38 375 aa6.05□□□□□ -1.44
LINC00393-202ENST00000452852 APEX2Q9UBZ4 518 aa6.05□□□□□ -1.44
LINC00393-202ENST00000452852 CGGBP1Q9UFW8 167 aaPredicted RBP6.05□□□□□ -1.44
LINC00393-202ENST00000452852 SUGT1Q9Y2Z0 365 aa6.05□□□□□ -1.44
LINC00393-202ENST00000452852 PHLDB1Q86UU1 1377 aa6.05□□□□□ -1.44
LINC00393-202ENST00000452852 ARAP3Q8WWN8 1544 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 A0A1W2PQ45 241 aaPredicted RBP6.04□□□□□ -1.44
LINC00393-202ENST00000452852 A0A1W2PQY0 241 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 ESYT3A0FGR9 886 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 WTIPA6NIX2 430 aaPredicted RBP6.04□□□□□ -1.44
LINC00393-202ENST00000452852 B2RBV5 119 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 FGF10O15520 208 aaPredicted RBP6.04□□□□□ -1.44
LINC00393-202ENST00000452852 MARCH6O60337 910 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 DPY19L1Q2PZI1 675 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 GALNT18Q6P9A2 607 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 IRF2BP1Q8IU81 584 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 FBXO15Q8NCQ5 510 aaPredicted RBP6.04□□□□□ -1.44
LINC00393-202ENST00000452852 MICAL1Q8TDZ2 1067 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 JMJD8Q96S16 334 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 SLC38A3Q99624 504 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 APBA2Q99767 749 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 CCDC113Q9H0I3 377 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 CRTAC1Q9NQ79 661 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 AKT3Q9Y243 479 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 MSRB2Q9Y3D2 182 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 COL4A3BPQ9Y5P4 624 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 TAF6LQ9Y6J9 622 aa6.04□□□□□ -1.44
LINC00393-202ENST00000452852 HECW2Q9P2P5 1572 aa6.03□□□□□ -1.44
LINC00393-202ENST00000452852 FHOD3Q2V2M9 1422 aa6.03□□□□□ -1.44
LINC00393-202ENST00000452852 CDC45O75419 566 aa6.03□□□□□ -1.44
LINC00393-202ENST00000452852 PDE6BP35913 854 aa6.03□□□□□ -1.44
LINC00393-202ENST00000452852 DDR2Q16832 855 aa6.03□□□□□ -1.44
LINC00393-202ENST00000452852 PLEKHG4Q58EX7 1191 aa6.03□□□□□ -1.44
LINC00393-202ENST00000452852 SYDE1Q6ZW31 735 aaPredicted RBP6.03□□□□□ -1.44
LINC00393-202ENST00000452852 LRP10Q7Z4F1 713 aa6.03□□□□□ -1.44
LINC00393-202ENST00000452852 FAM178BQ8IXR5 827 aa6.03□□□□□ -1.44
LINC00393-202ENST00000452852 NOP58Q9Y2X3 529 aaKnown RBP6.03□□□□□ -1.44
LINC00393-202ENST00000452852 NUP153P49790 1475 aaKnown RBP6.02□□□□□ -1.44
LINC00393-202ENST00000452852 NEO1Q92859 1461 aa6.02□□□□□ -1.44
LINC00393-202ENST00000452852 STXBP3O00186 592 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 AURKAO14965 403 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 PDPK1O15530 556 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 DNAJC6O75061 913 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 DDAH1O94760 285 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 PNLIPP16233 465 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 PRKCAP17252 672 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 SDHBP21912 280 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 ZNF143P52747 638 aaPredicted RBP6.02□□□□□ -1.45
LINC00393-202ENST00000452852 ANAPC15P60006 121 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 AMPD2Q01433 879 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 IFRD2Q12894 506 aaPredicted RBP6.02□□□□□ -1.45
LINC00393-202ENST00000452852 FXNQ16595 210 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 ADGRF1Q5T601 910 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 HLA-DQA1Q5Y7H0 255 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 CYP2R1Q6VVX0 501 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 ZNF605Q86T29 641 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 BVESQ8NE79 360 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 PTCHD1Q96NR3 888 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 IMPACTQ9P2X3 320 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 EMC9Q9Y3B6 208 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 RICTORQ6R327 1708 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 MYO5CQ9NQX4 1742 aa6.02□□□□□ -1.45
LINC00393-202ENST00000452852 OR14I1A6ND48 311 aa6.01□□□□□ -1.45
LINC00393-202ENST00000452852 PLEKHD1A6NEE1 506 aa6.01□□□□□ -1.45
LINC00393-202ENST00000452852 KCNH1O95259 989 aa6.01□□□□□ -1.45
LINC00393-202ENST00000452852 NAT2P11245 290 aa6.01□□□□□ -1.45
LINC00393-202ENST00000452852 GRB10Q13322 594 aa6.01□□□□□ -1.45
LINC00393-202ENST00000452852 RCSD1Q6JBY9 416 aa6.01□□□□□ -1.45
LINC00393-202ENST00000452852 JAMLQ86YT9 394 aa6.01□□□□□ -1.45
LINC00393-202ENST00000452852 NUP43Q8NFH3 380 aa6.01□□□□□ -1.45
LINC00393-202ENST00000452852 ZCRB1Q8TBF4 217 aaKnown RBP6.01□□□□□ -1.45
LINC00393-202ENST00000452852 APPBP2Q92624 585 aa6.01□□□□□ -1.45
LINC00393-202ENST00000452852 PPP1R14AQ96A00 147 aa6.01□□□□□ -1.45
LINC00393-202ENST00000452852 LGR4Q9BXB1 951 aa6.01□□□□□ -1.45
LINC00393-202ENST00000452852 ZNF552Q9H707 407 aaPredicted RBP6.01□□□□□ -1.45
LINC00393-202ENST00000452852 SPC25Q9HBM1 224 aa6.01□□□□□ -1.45
LINC00393-202ENST00000452852 PCDH12Q9NPG4 1184 aa6.01□□□□□ -1.45
LINC00393-202ENST00000452852 ACSL6Q9UKU0 697 aa6.01□□□□□ -1.45
LINC00393-202ENST00000452852 HECW1Q76N89 1606 aa6□□□□□ -1.45
LINC00393-202ENST00000452852 BCORL1Q5H9F3 1711 aa6□□□□□ -1.45
LINC00393-202ENST00000452852 MYOCOSA0A1B0GUC4 107 aa6□□□□□ -1.45
LINC00393-202ENST00000452852 C2orf71A6NGG8 1288 aa6□□□□□ -1.45
LINC00393-202ENST00000452852 PPP1R12AO14974 1030 aaPredicted RBP6□□□□□ -1.45
LINC00393-202ENST00000452852 GJB6O95452 261 aa6□□□□□ -1.45
LINC00393-202ENST00000452852 TBC1D8O95759 1140 aa6□□□□□ -1.45
LINC00393-202ENST00000452852 MSL3P1P0C860 447 aa6□□□□□ -1.45
LINC00393-202ENST00000452852 CYP4F8P98187 520 aa6□□□□□ -1.45
LINC00393-202ENST00000452852 MVKQ03426 396 aa6□□□□□ -1.45
LINC00393-202ENST00000452852 SQSTM1Q13501 440 aa6□□□□□ -1.45
LINC00393-202ENST00000452852 EEF1DP3Q658K8 133 aa6□□□□□ -1.45
LINC00393-202ENST00000452852 MRM1Q6IN84 353 aaKnown RBP6□□□□□ -1.45
LINC00393-202ENST00000452852 SLC26A8Q96RN1 970 aa6□□□□□ -1.45
LINC00393-202ENST00000452852 MCOLN1Q9GZU1 580 aa6□□□□□ -1.45
LINC00393-202ENST00000452852 PFDN2Q9UHV9 154 aa6□□□□□ -1.45
LINC00393-202ENST00000452852 BACE2Q9Y5Z0 518 aa6□□□□□ -1.45
LINC00393-202ENST00000452852 FRMPD1Q5SYB0 1578 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms