RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CLEC4GQ6UXB4 293 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 NUDT12Q9BQG2 462 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 PCDHA6Q9UN73 950 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 PCDHA8Q9Y5H6 950 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 BAZ2AQ9UIF9 1905 aaKnown RBP14.89□□□□□ -0.03
COL6A2-204ENST00000409416 PRPF4BQ13523 1007 aaKnown RBP14.89□□□□□ -0.03
COL6A2-204ENST00000409416 NPY5RQ15761 445 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 CCDC42Q96M95 316 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 CLIC2O15247 247 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 HSPA1LP34931 641 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 ADCY7P51828 1080 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 MKRN4PQ13434 485 aaPredicted RBP14.88□□□□□ -0.03
COL6A2-204ENST00000409416 SEPT2Q15019 361 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 SPA17Q15506 151 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 NEK8Q86SG6 692 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 ELOA2Q8IYF1 753 aaPredicted RBP14.88□□□□□ -0.03
COL6A2-204ENST00000409416 TUBGCP2Q9BSJ2 902 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 DISC1Q9NRI5 854 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 ZNF185O15231 689 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 SV2BQ7L1I2 683 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 C10orf67Q8IYJ2 551 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 JAKMIP2Q96AA8 810 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 ELMO3Q96BJ8 720 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 CNOT6LQ96LI5 555 aaKnown RBP14.88□□□□□ -0.03
COL6A2-204ENST00000409416 FAM107BQ9H098 131 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 CTDP1Q9Y5B0 961 aaPredicted RBP14.88□□□□□ -0.03
COL6A2-204ENST00000409416 PCDHA1Q9Y5I3 950 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 GOLPH3Q9H4A6 298 aa14.88□□□□□ -0.03
COL6A2-204ENST00000409416 PPEF1O14829 653 aaPredicted RBP14.87□□□□□ -0.03
COL6A2-204ENST00000409416 C21orf2O43822 256 aa14.87□□□□□ -0.03
COL6A2-204ENST00000409416 ATP1A1P05023 1023 aaKnown RBP14.87□□□□□ -0.03
COL6A2-204ENST00000409416 GNA11P29992 359 aa14.87□□□□□ -0.03
COL6A2-204ENST00000409416 SLC7A5Q01650 507 aa14.87□□□□□ -0.03
COL6A2-204ENST00000409416 TBC1D16Q8TBP0 767 aa14.87□□□□□ -0.03
COL6A2-204ENST00000409416 ANAPC4Q9UJX5 808 aa14.87□□□□□ -0.03
COL6A2-204ENST00000409416 PCDHB13Q9Y5F0 798 aa14.87□□□□□ -0.03
COL6A2-204ENST00000409416 E2F4Q16254 413 aa14.87□□□□□ -0.03
COL6A2-204ENST00000409416 PRAMEF18Q5VWM3 479 aa14.87□□□□□ -0.03
COL6A2-204ENST00000409416 MB21D1Q8N884 522 aa14.87□□□□□ -0.03
COL6A2-204ENST00000409416 GPATCH11Q8N954 259 aa14.87□□□□□ -0.03
COL6A2-204ENST00000409416 PIGOQ8TEQ8 1089 aa14.87□□□□□ -0.03
COL6A2-204ENST00000409416 CCDC51Q96ER9 411 aa14.87□□□□□ -0.03
COL6A2-204ENST00000409416 DDX4Q9NQI0 724 aaKnown RBP14.87□□□□□ -0.03
COL6A2-204ENST00000409416 LIMA1Q9UHB6 759 aaKnown RBP14.87□□□□□ -0.03
COL6A2-204ENST00000409416 PACSIN2Q9UNF0 486 aaPredicted RBP14.87□□□□□ -0.03
COL6A2-204ENST00000409416 FLT1P17948 1338 aa14.87□□□□□ -0.03
COL6A2-204ENST00000409416 SLC37A4O43826 429 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 GNAQP50148 359 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 CASP8Q14790 479 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 AOC3Q16853 763 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 PSTPIP2Q9H939 334 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 DAGLAQ9Y4D2 1042 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 H7C1D1 291 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 PBX1P40424 430 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 SERPINB13Q9UIV8 391 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 FZD1Q9UP38 647 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 POTEB2H3BUK9 544 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 NCK2O43639 380 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 LONP1P36776 959 aaKnown RBP14.86□□□□□ -0.03
COL6A2-204ENST00000409416 RCAN1P53805 252 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 IFT81Q8WYA0 676 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 TNFRSF25Q93038 417 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 IKZF4Q9H2S9 585 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 MAD2L2Q9UI95 211 aa14.86□□□□□ -0.03
COL6A2-204ENST00000409416 POTEB3A0JP26 581 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 POTECB2RU33 542 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 BEND6Q5SZJ8 279 aaPredicted RBP14.85□□□□□ -0.03
COL6A2-204ENST00000409416 ANKRD40Q6AI12 368 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 POTEBQ6S5H4 581 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 TPH2Q8IWU9 490 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 SAR1BQ9Y6B6 198 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 UBR2Q8IWV8 1755 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 MYH8P13535 1937 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 ARHGAP25P42331 645 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 RIN2Q8WYP3 895 aaPredicted RBP14.85□□□□□ -0.03
COL6A2-204ENST00000409416 GJD4Q96KN9 370 aaPredicted RBP14.85□□□□□ -0.03
COL6A2-204ENST00000409416 MMS19Q96T76 1030 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 MTA3Q9BTC8 594 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 PCDHA12Q9UN75 941 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 STRCP1A6NGW2 1772 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 POTEFA5A3E0 1075 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 POTEIP0CG38 1075 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 C2orf54Q08AI8 447 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 TRIM14Q14142 442 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 WHAMMP3Q1A5X7 153 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 POTEGQ6S5H5 508 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 POTEEQ6S8J3 1075 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 PYM1Q9BRP8 204 aaKnown RBP14.85□□□□□ -0.03
COL6A2-204ENST00000409416 BCAS3Q9H6U6 928 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 MLXIPQ9HAP2 919 aa14.85□□□□□ -0.03
COL6A2-204ENST00000409416 COL1A1P02452 1464 aaPredicted RBP14.84□□□□□ -0.03
COL6A2-204ENST00000409416 TMEM110-MUSTN1A8MSY1 372 aa14.84□□□□□ -0.03
COL6A2-204ENST00000409416 SEMA3EO15041 775 aa14.84□□□□□ -0.03
COL6A2-204ENST00000409416 ATP8B1O43520 1251 aa14.84□□□□□ -0.03
COL6A2-204ENST00000409416 KRT86O43790 486 aa14.84□□□□□ -0.03
COL6A2-204ENST00000409416 CYLC1P35663 651 aaPredicted RBP14.84□□□□□ -0.03
COL6A2-204ENST00000409416 TRIM31Q9BZY9 425 aa14.84□□□□□ -0.03
COL6A2-204ENST00000409416 GBP3Q9H0R5 595 aa14.84□□□□□ -0.03
COL6A2-204ENST00000409416 ACBD3Q9H3P7 528 aa14.84□□□□□ -0.03
COL6A2-204ENST00000409416 DDX25Q9UHL0 483 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms