RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 LRRC53A6NM62 1247 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 CLSTN1O94985 981 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 TAL1P17542 331 aaPredicted RBP14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 GUCY2FP51841 1108 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 HLTFQ14527 1009 aaKnown RBP eCLIP14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 DCAF17Q5H9S7 520 aaPredicted RBP14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 MEX3CQ5U5Q3 659 aaKnown RBP14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 GIMAP8Q8ND71 665 aaPredicted RBP14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 COG1Q8WTW3 980 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 DDX12PQ92771 950 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 MS4A14Q96JA4 679 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 THAP9Q9H5L6 903 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 CD209Q9NNX6 404 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 KIAA1024Q9UPX6 916 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 ZBED6P86452 979 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 CYP4A11Q02928 519 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 DHTKD1Q96HY7 919 aaPredicted RBP14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 L1RE1Q9UN81 338 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 PLEKHG2Q9H7P9 1386 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 TMCO5BA8MYB1 307 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 E9PMD0 336 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 ZEB2O60315 1214 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 KIF11P52732 1056 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 IRX5P78411 483 aaPredicted RBP14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 CKAP4Q07065 602 aaKnown RBP14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 EHBP1Q8NDI1 1231 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 HDAC7Q8WUI4 952 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 ALS2CR12Q96Q35 445 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 ADAMTS7Q9UKP4 1686 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 TAF1P21675 1872 aa14.06□□□□□ -0.16
PPP4R1-202ENST00000400555 KLRC4O43908 158 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 AKR1B1P15121 316 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 PLS1Q14651 629 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 KLHL7Q8IXQ5 586 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 DHX37Q8IY37 1157 aaKnown RBP14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 CAPN6Q9Y6Q1 641 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 PDE2AO00408 941 aaPredicted RBP14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 RPS6KA4O75676 772 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 RHOBTB3O94955 611 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 ZNF76P36508 570 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 STAT3P40763 770 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 SLC30A10Q6XR72 485 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 LSM14BQ9BX40 385 aaKnown RBP14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 SEMA6BQ9H3T3 888 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 GOLPH3Q9H4A6 298 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 PCDHA12Q9UN75 941 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 PCDHA13Q9Y5I0 950 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 ATP8B1O43520 1251 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 SBK1Q52WX2 424 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 BCCIPQ9P287 314 aaKnown RBP eCLIP14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 ITIH6Q6UXX5 1313 aa14.05□□□□□ -0.16
PPP4R1-202ENST00000400555 SRGNP10124 158 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 GGCXP38435 758 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 ATP1A2P50993 1020 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 CT47A1Q5JQC4 288 aaPredicted RBP14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 AFAP1L1Q8TED9 768 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 SPAG5Q96R06 1193 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 LRRC1Q9BTT6 524 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 TMX4Q9H1E5 349 aaPredicted RBP14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 USP40Q9NVE5 1235 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 KBTBD4Q9NVX7 518 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 LCMT1Q9UIC8 334 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 SPEF2Q9C093 1822 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 EHHADHQ08426 723 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 TMED8Q6PL24 325 aaPredicted RBP14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 KCNK18Q7Z418 384 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 KIAA0895Q8NCT3 520 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 NUP58Q9BVL2 599 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 DDX25Q9UHL0 483 aaKnown RBP14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 GOLGA6BA6NDN3 693 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 LRRC10BA6NIK2 292 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 USP17L10C9JJH3 530 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 CHMP2AO43633 222 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 USP14P54578 494 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 VWA3BQ502W6 1294 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 ZNF622Q969S3 477 aaKnown RBP eCLIP14.04□□□□□ -0.169e-9■□□□□ 11
PPP4R1-202ENST00000400555 ZC3H12CQ9C0D7 883 aaKnown RBP14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 CCSER1Q9C0I3 900 aa14.04□□□□□ -0.16
PPP4R1-202ENST00000400555 SFI1A8K8P3 1242 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 MYBL2P10244 700 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 GRAPQ13588 217 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 GRAPLQ8TC17 118 aaPredicted RBP14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 PANK4Q9NVE7 773 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 ADAMTS1Q9UHI8 967 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 PALM3A6NDB9 673 aaPredicted RBP14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 ACTN2P35609 894 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 PABPC4Q13310 644 aaKnown RBP eCLIP14.03□□□□□ -0.169e-6■■■■□ 24.7
PPP4R1-202ENST00000400555 PRPF4BQ13523 1007 aaKnown RBP14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 GPBP1Q86WP2 473 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 KIAA0825Q8IV33 1275 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 PODXL2Q9NZ53 605 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 SLC1A4P43007 532 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 IQCEQ6IPM2 695 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 MAEAQ7L5Y9 396 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 MYOCDQ8IZQ8 938 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 SPICE1Q8N0Z3 855 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 TBC1D5Q92609 795 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 PSTPIP2Q9H939 334 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 FAM53CQ9NYF3 392 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms