RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 CNOT11Q9UKZ1 510 aaKnown RBP6.97□□□□□ -1.29
PMS1-202ENST00000374826 EFR3BQ9Y2G0 817 aa6.97□□□□□ -1.29
PMS1-202ENST00000374826 ABCC2Q92887 1545 aa6.96□□□□□ -1.29
PMS1-202ENST00000374826 NCAM1P13591 858 aa6.96□□□□□ -1.3
PMS1-202ENST00000374826 INSRRP14616 1297 aa6.96□□□□□ -1.3
PMS1-202ENST00000374826 GJA8P48165 433 aa6.96□□□□□ -1.3
PMS1-202ENST00000374826 SOX9P48436 509 aa6.96□□□□□ -1.3
PMS1-202ENST00000374826 HTRA3P83110 453 aa6.96□□□□□ -1.3
PMS1-202ENST00000374826 NT5DC1Q5TFE4 455 aa6.96□□□□□ -1.3
PMS1-202ENST00000374826 TDRD10Q5VZ19 366 aaKnown RBP6.96□□□□□ -1.3
PMS1-202ENST00000374826 HHIPL2Q6UWX4 724 aa6.96□□□□□ -1.3
PMS1-202ENST00000374826 RUFY4Q6ZNE9 571 aa6.96□□□□□ -1.3
PMS1-202ENST00000374826 FERMT3Q86UX7 667 aa6.96□□□□□ -1.3
PMS1-202ENST00000374826 SMARCC1Q92922 1105 aaPredicted RBP6.96□□□□□ -1.3
PMS1-202ENST00000374826 BRF1Q92994 677 aa6.96□□□□□ -1.3
PMS1-202ENST00000374826 SPATA25Q9BR10 227 aa6.96□□□□□ -1.3
PMS1-202ENST00000374826 RNF38Q9H0F5 515 aa6.96□□□□□ -1.3
PMS1-202ENST00000374826 GP6Q9HCN6 339 aa6.96□□□□□ -1.3
PMS1-202ENST00000374826 PMF1-BGLAPU3KQ54 211 aa6.96□□□□□ -1.3
PMS1-202ENST00000374826 PTPRGP23470 1445 aa6.95□□□□□ -1.3
PMS1-202ENST00000374826 FHOD3Q2V2M9 1422 aa6.95□□□□□ -1.3
PMS1-202ENST00000374826 SH3D21A4FU49 640 aa6.95□□□□□ -1.3
PMS1-202ENST00000374826 CORO7P57737 925 aa6.95□□□□□ -1.3
PMS1-202ENST00000374826 ZYXQ15942 572 aaKnown RBP6.95□□□□□ -1.3
PMS1-202ENST00000374826 AXDND1Q5T1B0 1012 aaPredicted RBP6.95□□□□□ -1.3
PMS1-202ENST00000374826 DCAF15Q66K64 600 aa6.95□□□□□ -1.3
PMS1-202ENST00000374826 UNC5AQ6ZN44 842 aa6.95□□□□□ -1.3
PMS1-202ENST00000374826 PPFIBP1Q86W92 1011 aa6.95□□□□□ -1.3
PMS1-202ENST00000374826 PTCHD1Q96NR3 888 aa6.95□□□□□ -1.3
PMS1-202ENST00000374826 CRBNQ96SW2 442 aa6.95□□□□□ -1.3
PMS1-202ENST00000374826 USP40Q9NVE5 1235 aa6.95□□□□□ -1.3
PMS1-202ENST00000374826 PLB1Q6P1J6 1458 aa6.95□□□□□ -1.3
PMS1-202ENST00000374826 PCF11O94913 1555 aaKnown RBP6.95□□□□□ -1.3
PMS1-202ENST00000374826 ARHGAP35Q9NRY4 1499 aa6.94□□□□□ -1.3
PMS1-202ENST00000374826 TBC1D8O95759 1140 aa6.94□□□□□ -1.3
PMS1-202ENST00000374826 CD247P20963 164 aa6.94□□□□□ -1.3
PMS1-202ENST00000374826 EIF6P56537 245 aaKnown RBP6.94□□□□□ -1.3
PMS1-202ENST00000374826 TGIF2Q9GZN2 237 aa6.94□□□□□ -1.3
PMS1-202ENST00000374826 DBR1Q9UK59 544 aaKnown RBP6.94□□□□□ -1.3
PMS1-202ENST00000374826 MYRFQ9Y2G1 1151 aa6.94□□□□□ -1.3
PMS1-202ENST00000374826 FAN1Q9Y2M0 1017 aa6.94□□□□□ -1.3
PMS1-202ENST00000374826 FHOD1Q9Y613 1164 aa6.94□□□□□ -1.3
PMS1-202ENST00000374826 DIP2BQ9P265 1576 aa6.94□□□□□ -1.3
PMS1-202ENST00000374826 HECW1Q76N89 1606 aa6.94□□□□□ -1.3
PMS1-202ENST00000374826 MAPKBP1O60336 1514 aa6.93□□□□□ -1.3
PMS1-202ENST00000374826 K7ESM1 405 aa6.93□□□□□ -1.3
PMS1-202ENST00000374826 ASGR2P07307 311 aa6.93□□□□□ -1.3
PMS1-202ENST00000374826 TACR1P25103 407 aa6.93□□□□□ -1.3
PMS1-202ENST00000374826 DLX2Q07687 328 aaPredicted RBP6.93□□□□□ -1.3
PMS1-202ENST00000374826 FIBCD1Q8N539 461 aa6.93□□□□□ -1.3
PMS1-202ENST00000374826 GPR20Q99678 358 aa6.93□□□□□ -1.3
PMS1-202ENST00000374826 ACBD3Q9H3P7 528 aa6.93□□□□□ -1.3
PMS1-202ENST00000374826 SF3B6Q9Y3B4 125 aaKnown RBP6.93□□□□□ -1.3
PMS1-202ENST00000374826 ZNF451Q9Y4E5 1061 aa6.93□□□□□ -1.3
PMS1-202ENST00000374826 UACAQ9BZF9 1416 aa6.93□□□□□ -1.3
PMS1-202ENST00000374826 UHRF1BP1LA0JNW5 1464 aa6.92□□□□□ -1.3
PMS1-202ENST00000374826 NOBOXO60393 691 aa6.92□□□□□ -1.3
PMS1-202ENST00000374826 TP53P04637 393 aaPredicted RBP6.92□□□□□ -1.3
PMS1-202ENST00000374826 L1CAMP32004 1257 aa6.92□□□□□ -1.3
PMS1-202ENST00000374826 MC3RP41968 323 aa6.92□□□□□ -1.3
PMS1-202ENST00000374826 GIPRP48546 466 aa6.92□□□□□ -1.3
PMS1-202ENST00000374826 NASPP49321 788 aaPredicted RBP6.92□□□□□ -1.3
PMS1-202ENST00000374826 PUM1Q14671 1186 aaKnown RBP eCLIP6.92□□□□□ -1.3
PMS1-202ENST00000374826 B3GNT8Q7Z7M8 397 aa6.92□□□□□ -1.3
PMS1-202ENST00000374826 OR6P1Q8NGX9 317 aa6.92□□□□□ -1.3
PMS1-202ENST00000374826 CCSER2Q9H7U1 834 aa6.92□□□□□ -1.3
PMS1-202ENST00000374826 FAM86C1Q9NVL1 165 aa6.92□□□□□ -1.3
PMS1-202ENST00000374826 DUSP10Q9Y6W6 482 aa6.92□□□□□ -1.3
PMS1-202ENST00000374826 PPRC1Q5VV67 1664 aaKnown RBP6.91□□□□□ -1.3
PMS1-202ENST00000374826 A0A087WZG4 1122 aa6.91□□□□□ -1.3
PMS1-202ENST00000374826 GLI4P10075 376 aa6.91□□□□□ -1.3
PMS1-202ENST00000374826 IFNGR1P15260 489 aa6.91□□□□□ -1.3
PMS1-202ENST00000374826 POU4F1Q01851 419 aa6.91□□□□□ -1.3
PMS1-202ENST00000374826 CARFQ8N187 725 aa6.91□□□□□ -1.3
PMS1-202ENST00000374826 DDX1Q92499 740 aaKnown RBP6.91□□□□□ -1.3
PMS1-202ENST00000374826 ALG3Q92685 438 aa6.91□□□□□ -1.3
PMS1-202ENST00000374826 PALD1Q9ULE6 856 aa6.91□□□□□ -1.3
PMS1-202ENST00000374826 INPP5FQ9Y2H2 1132 aa6.91□□□□□ -1.3
PMS1-202ENST00000374826 DIS3Q9Y2L1 958 aaKnown RBP6.91□□□□□ -1.3
PMS1-202ENST00000374826 SLC12A7Q9Y666 1083 aa6.91□□□□□ -1.3
PMS1-202ENST00000374826 LTBP3Q9NS15 1303 aa6.91□□□□□ -1.3
PMS1-202ENST00000374826 CPLX3Q8WVH0 158 aa6.9□□□□□ -1.3
PMS1-202ENST00000374826 SHDQ96IW2 340 aa6.9□□□□□ -1.3
PMS1-202ENST00000374826 SEC16BQ96JE7 1060 aa6.9□□□□□ -1.3
PMS1-202ENST00000374826 KRTAP9-8Q9BYQ0 159 aa6.9□□□□□ -1.3
PMS1-202ENST00000374826 NOL6Q9H6R4 1146 aaKnown RBP6.9□□□□□ -1.3
PMS1-202ENST00000374826 ZNF214Q9UL59 606 aaPredicted RBP6.9□□□□□ -1.3
PMS1-202ENST00000374826 KDM5BQ9UGL1 1544 aa6.9□□□□□ -1.31
PMS1-202ENST00000374826 CFAP43Q8NDM7 1665 aa6.9□□□□□ -1.31
PMS1-202ENST00000374826 CD3EP07766 207 aa6.89□□□□□ -1.31
PMS1-202ENST00000374826 ITGA4P13612 1032 aa6.89□□□□□ -1.31
PMS1-202ENST00000374826 MAGEA10P43363 369 aaPredicted RBP6.89□□□□□ -1.31
PMS1-202ENST00000374826 ZNF827Q17R98 1081 aa6.89□□□□□ -1.31
PMS1-202ENST00000374826 C19orf47Q8N9M1 422 aaKnown RBP6.89□□□□□ -1.31
PMS1-202ENST00000374826 TSPAN17Q96FV3 270 aa6.89□□□□□ -1.31
PMS1-202ENST00000374826 LNPKQ9C0E8 428 aa6.89□□□□□ -1.31
PMS1-202ENST00000374826 BCAS3Q9H6U6 928 aa6.89□□□□□ -1.31
PMS1-202ENST00000374826 RXFP1Q9HBX9 757 aa6.89□□□□□ -1.31
PMS1-202ENST00000374826 CLIP1P30622 1438 aa6.89□□□□□ -1.31
PMS1-202ENST00000374826 CEP162Q5TB80 1403 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms