RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeastyeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL1YPL008W DOP1Q03921 1698 aa5.39□□□□□ -1.55
CHL1YPL008W DIT2P21595 489 aa5.38□□□□□ -1.55
CHL1YPL008W SEC7P11075 2009 aaKnown RBP5.37□□□□□ -1.55
CHL1YPL008W ENP1P38333 483 aaKnown RBP5.37□□□□□ -1.55
CHL1YPL008W CHC1P22137 1653 aaKnown RBP5.37□□□□□ -1.55
CHL1YPL008W GLC3P32775 704 aa5.37□□□□□ -1.55
CHL1YPL008W URN1Q06525 465 aaKnown RBP5.37□□□□□ -1.55
CHL1YPL008W RAV1P47104 1357 aa5.37□□□□□ -1.55
CHL1YPL008W PBS2P08018 668 aa5.36□□□□□ -1.55
CHL1YPL008W YNR021WP53723 404 aaKnown RBP5.36□□□□□ -1.55
CHL1YPL008W RTC1Q08281 1341 aa5.36□□□□□ -1.55
CHL1YPL008W MHP1P43638 1398 aa5.34□□□□□ -1.55
CHL1YPL008W MRM1P25270 412 aa5.34□□□□□ -1.55
CHL1YPL008W MAK11P20484 414 aaKnown RBP5.33□□□□□ -1.56
CHL1YPL008W YML020WQ03722 664 aa5.33□□□□□ -1.56
CHL1YPL008W TY3B-IQ7LHG5 1498 aaKnown RBP5.33□□□□□ -1.56
CHL1YPL008W DNF2Q12675 1612 aa5.33□□□□□ -1.56
CHL1YPL008W MAM3Q12296 706 aa5.32□□□□□ -1.56
CHL1YPL008W NUP188P52593 1655 aaKnown RBP5.32□□□□□ -1.56
CHL1YPL008W AIM7Q12156 149 aa5.32□□□□□ -1.56
CHL1YPL008W ESL2P36168 1195 aa5.31□□□□□ -1.56
CHL1YPL008W IOC4Q04213 475 aa5.31□□□□□ -1.56
CHL1YPL008W IML1P47170 1584 aa5.31□□□□□ -1.56
CHL1YPL008W VPS29P38759 282 aa5.31□□□□□ -1.56
CHL1YPL008W YCK3P39962 524 aa5.31□□□□□ -1.56
CHL1YPL008W HAP1P0CE41 1502 aa5.3□□□□□ -1.56
CHL1YPL008W EPS1P40557 701 aa5.3□□□□□ -1.56
CHL1YPL008W BDF1P35817 686 aa5.3□□□□□ -1.56
CHL1YPL008W VMR1P38735 1592 aa5.29□□□□□ -1.56
CHL1YPL008W NSR1P27476 414 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
CHL1YPL008W PKC1P24583 1151 aa5.28□□□□□ -1.56
CHL1YPL008W EDS1P38073 919 aa5.28□□□□□ -1.56
CHL1YPL008W GLN1P32288 370 aaKnown RBP5.28□□□□□ -1.56
CHL1YPL008W IES2P40154 320 aa5.27□□□□□ -1.57
CHL1YPL008W NAP1P25293 417 aaKnown RBP5.27□□□□□ -1.57
CHL1YPL008W COQ8P27697 501 aa5.27□□□□□ -1.57
CHL1YPL008W SUB2Q07478 446 aaKnown RBP5.27□□□□□ -1.57
CHL1YPL008W SPT7P35177 1332 aa5.26□□□□□ -1.57
CHL1YPL008W PDR11P40550 1411 aa5.25□□□□□ -1.57
CHL1YPL008W TFB3Q03290 321 aa5.25□□□□□ -1.57
CHL1YPL008W IPL1P38991 367 aa5.25□□□□□ -1.57
CHL1YPL008W YLR419WQ06698 1435 aaKnown RBP5.24□□□□□ -1.57
CHL1YPL008W TAF5P38129 798 aa5.24□□□□□ -1.57
CHL1YPL008W RTG3P38165 486 aa5.24□□□□□ -1.57
CHL1YPL008W NOP2P40991 618 aaKnown RBP5.24□□□□□ -1.57
CHL1YPL008W ITT1Q04638 464 aa5.23□□□□□ -1.57
CHL1YPL008W STS1P38637 319 aa5.23□□□□□ -1.57
CHL1YPL008W YDR090CQ03193 310 aa5.23□□□□□ -1.57
CHL1YPL008W YAP3P38749 330 aa5.22□□□□□ -1.57
CHL1YPL008W PDS5Q04264 1277 aa5.22□□□□□ -1.57
CHL1YPL008W HPC2Q01448 625 aa5.22□□□□□ -1.57
CHL1YPL008W BNI1P41832 1953 aa5.22□□□□□ -1.57
CHL1YPL008W KIP3P53086 805 aaKnown RBP5.21□□□□□ -1.57
CHL1YPL008W SLX8P40072 274 aa5.21□□□□□ -1.58
CHL1YPL008W BBC1P47068 1157 aa5.21□□□□□ -1.58
CHL1YPL008W MRX12P47084 519 aa5.21□□□□□ -1.58
CHL1YPL008W KTR1P27810 393 aaKnown RBP5.2□□□□□ -1.58
CHL1YPL008W CFT1Q06632 1357 aaKnown RBP5.2□□□□□ -1.58
CHL1YPL008W ALD4P46367 519 aaKnown RBP5.2□□□□□ -1.58
CHL1YPL008W BCK1Q01389 1478 aa5.2□□□□□ -1.58
CHL1YPL008W COX6P00427 148 aa5.19□□□□□ -1.58
CHL1YPL008W SPE2P21182 396 aa5.19□□□□□ -1.58
CHL1YPL008W NUP192P47054 1683 aa5.19□□□□□ -1.58
CHL1YPL008W ATG32P40458 529 aa5.18□□□□□ -1.58
CHL1YPL008W REF2P42073 533 aaPredicted RBP5.18□□□□□ -1.58
CHL1YPL008W RPP0P05317 312 aaKnown RBP5.18□□□□□ -1.58
CHL1YPL008W GEF1P37020 779 aa5.18□□□□□ -1.58
CHL1YPL008W TYS1P36421 394 aaKnown RBP5.17□□□□□ -1.58
CHL1YPL008W ERG12P07277 443 aa5.17□□□□□ -1.58
CHL1YPL008W SSA1P10591 642 aaKnown RBP5.17□□□□□ -1.58
CHL1YPL008W PRS1P32895 427 aaKnown RBP5.16□□□□□ -1.58
CHL1YPL008W UBP14P38237 781 aaKnown RBP5.16□□□□□ -1.58
CHL1YPL008W BIM1P40013 344 aa5.16□□□□□ -1.58
CHL1YPL008W TAF8Q03750 510 aa5.15□□□□□ -1.58
CHL1YPL008W NOB1Q08444 459 aaKnown RBP5.15□□□□□ -1.58
CHL1YPL008W MRPL32P25348 183 aa5.15□□□□□ -1.59
CHL1YPL008W FKH1P40466 484 aa5.14□□□□□ -1.59
CHL1YPL008W SEN54Q02825 467 aaPredicted RBP5.14□□□□□ -1.59
CHL1YPL008W RAD9P14737 1309 aa5.14□□□□□ -1.59
CHL1YPL008W NOP53Q12080 455 aaKnown RBP5.13□□□□□ -1.59
CHL1YPL008W CHZ1P40019 153 aaPredicted RBP5.13□□□□□ -1.59
CHL1YPL008W YRB30P53107 440 aaPredicted RBP5.13□□□□□ -1.59
CHL1YPL008W DNF3Q12674 1656 aa5.13□□□□□ -1.59
CHL1YPL008W MAK21Q12176 1025 aaKnown RBP5.12□□□□□ -1.59
CHL1YPL008W PAM1P37304 830 aaKnown RBP5.12□□□□□ -1.59
CHL1YPL008W CDC45Q08032 650 aa5.12□□□□□ -1.59
CHL1YPL008W PSK1P31374 1356 aa5.12□□□□□ -1.59
CHL1YPL008W CAB1Q04430 367 aa5.11□□□□□ -1.59
CHL1YPL008W VPS27P40343 622 aaKnown RBP5.1□□□□□ -1.59
CHL1YPL008W PTC3P34221 468 aaKnown RBP5.1□□□□□ -1.59
CHL1YPL008W YLR326WQ06170 240 aaKnown RBP5.1□□□□□ -1.59
CHL1YPL008W MLP1Q02455 1875 aaKnown RBP5.1□□□□□ -1.59
CHL1YPL008W TIF1P10081 395 aaKnown RBP5.1□□□□□ -1.59
CHL1YPL008W MAK10Q02197 733 aa5.1□□□□□ -1.59
CHL1YPL008W BIO2P32451 375 aa5.09□□□□□ -1.59
CHL1YPL008W TY1B-NL2Q99337 1749 aaKnown RBP5.09□□□□□ -1.6
CHL1YPL008W MIF2P35201 549 aa5.09□□□□□ -1.6
CHL1YPL008W YFR006WP43590 535 aa5.09□□□□□ -1.6
CHL1YPL008W PRY3P47033 881 aa5.09□□□□□ -1.6
CHL1YPL008W TAP42Q04372 366 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms