RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C CHC1P22137 1653 aaKnown RBP6.7□□□□□ -1.34
RAT1YOR048C TPD3P31383 635 aa6.69□□□□□ -1.34
RAT1YOR048C HIM1Q06674 414 aa6.69□□□□□ -1.34
RAT1YOR048C SAP155P43612 1002 aa6.68□□□□□ -1.34
RAT1YOR048C IML1P47170 1584 aa6.68□□□□□ -1.34
RAT1YOR048C RTR1P40084 226 aaPredicted RBP6.68□□□□□ -1.34
RAT1YOR048C CLC1P17891 233 aa6.68□□□□□ -1.34
RAT1YOR048C FKH1P40466 484 aa6.68□□□□□ -1.34
RAT1YOR048C PAP2P53632 584 aaKnown RBP6.68□□□□□ -1.34
RAT1YOR048C RCM1P53972 490 aa6.67□□□□□ -1.34
RAT1YOR048C DNF2Q12675 1612 aa6.66□□□□□ -1.34
RAT1YOR048C IPL1P38991 367 aa6.66□□□□□ -1.34
RAT1YOR048C THI22Q06490 572 aa6.66□□□□□ -1.34
RAT1YOR048C ALD4P46367 519 aaKnown RBP6.65□□□□□ -1.34
RAT1YOR048C YML133CQ03099 1374 aa6.65□□□□□ -1.35
RAT1YOR048C YLL067CQ07888 1374 aa6.65□□□□□ -1.35
RAT1YOR048C YLL066CQ99208 1374 aa6.65□□□□□ -1.35
RAT1YOR048C PPH3P32345 308 aa6.65□□□□□ -1.35
RAT1YOR048C IOC4Q04213 475 aa6.64□□□□□ -1.35
RAT1YOR048C PUF6Q04373 656 aaKnown RBP6.64□□□□□ -1.35
RAT1YOR048C YBR287WP38355 427 aa6.63□□□□□ -1.35
RAT1YOR048C ILV3P39522 585 aaKnown RBP6.63□□□□□ -1.35
RAT1YOR048C EAF7P53911 425 aaKnown RBP6.63□□□□□ -1.35
RAT1YOR048C RTT109Q07794 436 aa6.63□□□□□ -1.35
RAT1YOR048C RLF2Q12495 606 aa6.63□□□□□ -1.35
RAT1YOR048C KRE5P22023 1365 aa6.63□□□□□ -1.35
RAT1YOR048C CAB3P36076 571 aa6.63□□□□□ -1.35
RAT1YOR048C ITT1Q04638 464 aa6.63□□□□□ -1.35
RAT1YOR048C MET5P47169 1442 aa6.63□□□□□ -1.35
RAT1YOR048C POL32P47110 350 aa6.63□□□□□ -1.35
RAT1YOR048C YIL092WP40497 633 aa6.62□□□□□ -1.35
RAT1YOR048C YGL081WP53156 320 aa6.61□□□□□ -1.35
RAT1YOR048C GAS4Q08271 471 aa6.61□□□□□ -1.35
RAT1YOR048C KAR2P16474 682 aaKnown RBP6.61□□□□□ -1.35
RAT1YOR048C PCT1P13259 424 aa6.6□□□□□ -1.35
RAT1YOR048C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
RAT1YOR048C NUP188P52593 1655 aaKnown RBP6.6□□□□□ -1.35
RAT1YOR048C RAD2P07276 1031 aa6.6□□□□□ -1.35
RAT1YOR048C PRD1P25375 712 aa6.6□□□□□ -1.35
RAT1YOR048C EBP2P36049 427 aaKnown RBP6.6□□□□□ -1.35
RAT1YOR048C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
RAT1YOR048C RPP0P05317 312 aaKnown RBP6.58□□□□□ -1.36
RAT1YOR048C RIA1P53893 1110 aa6.58□□□□□ -1.36
RAT1YOR048C HEF3P53978 1044 aaKnown RBP6.58□□□□□ -1.36
RAT1YOR048C ROX1P25042 368 aa6.56□□□□□ -1.36
RAT1YOR048C SLN1P39928 1220 aaPredicted RBP6.56□□□□□ -1.36
RAT1YOR048C SNF7P39929 240 aaKnown RBP6.56□□□□□ -1.36
RAT1YOR048C BCK1Q01389 1478 aa6.55□□□□□ -1.36
RAT1YOR048C TRP5P00931 707 aaKnown RBP6.55□□□□□ -1.36
RAT1YOR048C RPS24AP0CX31 135 aaKnown RBP6.55□□□□□ -1.36
RAT1YOR048C RPS24BP0CX32 135 aaKnown RBP6.55□□□□□ -1.36
RAT1YOR048C YGR122WP53272 402 aa6.54□□□□□ -1.36
RAT1YOR048C SNF2P22082 1703 aa6.54□□□□□ -1.36
RAT1YOR048C MRX12P47084 519 aa6.53□□□□□ -1.36
RAT1YOR048C AUS1Q08409 1394 aa6.53□□□□□ -1.36
RAT1YOR048C KNS1P32350 737 aaPredicted RBP6.52□□□□□ -1.37
RAT1YOR048C LEO1P38439 464 aa6.52□□□□□ -1.37
RAT1YOR048C RRT14P40470 206 aa6.52□□□□□ -1.37
RAT1YOR048C TRM3Q07527 1436 aa6.51□□□□□ -1.37
RAT1YOR048C ABP1P15891 592 aaKnown RBP6.51□□□□□ -1.37
RAT1YOR048C DPS1P04802 557 aaKnown RBP6.5□□□□□ -1.37
RAT1YOR048C SPO1P53541 631 aa6.5□□□□□ -1.37
RAT1YOR048C RFC1P38630 861 aaKnown RBP6.49□□□□□ -1.37
RAT1YOR048C YIR014WP40570 242 aa6.49□□□□□ -1.37
RAT1YOR048C SWC3P31376 625 aa6.49□□□□□ -1.37
RAT1YOR048C LEU2P04173 364 aaPredicted RBP6.48□□□□□ -1.37
RAT1YOR048C MSP1P28737 362 aa6.48□□□□□ -1.37
RAT1YOR048C RMD1Q03441 430 aa6.48□□□□□ -1.37
RAT1YOR048C ARL1P38116 183 aaKnown RBP6.48□□□□□ -1.37
RAT1YOR048C BRN1P38170 754 aa6.48□□□□□ -1.37
RAT1YOR048C HXT17P53631 564 aa6.48□□□□□ -1.37
RAT1YOR048C PDI1P17967 522 aaKnown RBP6.47□□□□□ -1.37
RAT1YOR048C HXT13P39924 564 aa6.47□□□□□ -1.37
RAT1YOR048C YPP1P46951 817 aa6.47□□□□□ -1.37
RAT1YOR048C NKP2Q06162 153 aa6.47□□□□□ -1.37
RAT1YOR048C CSI1Q04368 295 aa6.47□□□□□ -1.37
RAT1YOR048C DSD1P53095 428 aa6.47□□□□□ -1.37
RAT1YOR048C CTR9P89105 1077 aa6.47□□□□□ -1.37
RAT1YOR048C BNI1P41832 1953 aa6.47□□□□□ -1.37
RAT1YOR048C CPS1P27614 576 aa6.46□□□□□ -1.38
RAT1YOR048C TEA1P47988 759 aa6.46□□□□□ -1.38
RAT1YOR048C NAP1P25293 417 aaKnown RBP6.46□□□□□ -1.38
RAT1YOR048C VPS24P36095 224 aaKnown RBP6.45□□□□□ -1.38
RAT1YOR048C DLD1P32891 587 aa6.44□□□□□ -1.38
RAT1YOR048C AKL1P38080 1108 aaKnown RBP6.44□□□□□ -1.38
RAT1YOR048C SRT1Q03175 343 aa6.44□□□□□ -1.38
RAT1YOR048C HAP1P0CE41 1502 aa6.44□□□□□ -1.38
RAT1YOR048C YNG2P38806 282 aaKnown RBP6.44□□□□□ -1.38
RAT1YOR048C NPA3P47122 385 aa6.44□□□□□ -1.38
RAT1YOR048C ENT3P47160 408 aa6.44□□□□□ -1.38
RAT1YOR048C ITC1P53125 1264 aa6.44□□□□□ -1.38
RAT1YOR048C MDG1P53885 366 aa6.44□□□□□ -1.38
RAT1YOR048C NMD2P38798 1089 aaKnown RBP6.44□□□□□ -1.38
RAT1YOR048C MNN4P36044 1178 aa6.43□□□□□ -1.38
RAT1YOR048C ZDS2P54786 942 aa6.43□□□□□ -1.38
RAT1YOR048C SRS2P12954 1174 aa6.43□□□□□ -1.38
RAT1YOR048C HSP104P31539 908 aaKnown RBP6.42□□□□□ -1.38
RAT1YOR048C VPS20Q04272 221 aa6.42□□□□□ -1.38
RAT1YOR048C TAP42Q04372 366 aa6.42□□□□□ -1.38
RAT1YOR048C URN1Q06525 465 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms