RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	MLP1	Q02455	1875 aa	Known RBP	2.46	□□□□□ -2.02
SSK2	YNR031C	YAP3	P38749	330 aa		2.46	□□□□□ -2.02
SSK2	YNR031C	THI12	P42883	340 aa		2.45	□□□□□ -2.02
SSK2	YNR031C	THI5	P43534	340 aa		2.45	□□□□□ -2.02
SSK2	YNR031C	THI11	P47183	340 aa		2.45	□□□□□ -2.02
SSK2	YNR031C	THI13	Q07748	340 aa		2.45	□□□□□ -2.02
SSK2	YNR031C	HKR1	P41809	1802 aa		2.44	□□□□□ -2.02
SSK2	YNR031C	RPG1	P38249	964 aa	Known RBP	2.44	□□□□□ -2.02
SSK2	YNR031C	PUS5	Q06244	254 aa		2.43	□□□□□ -2.02
SSK2	YNR031C	TSR3	Q12094	313 aa	Known RBP	2.43	□□□□□ -2.02
SSK2	YNR031C	IKI3	Q06706	1349 aa	Known RBP	2.43	□□□□□ -2.02
SSK2	YNR031C	YBL086C	P38177	466 aa		2.42	□□□□□ -2.02
SSK2	YNR031C	MET10	P39692	1035 aa		2.42	□□□□□ -2.02
SSK2	YNR031C	URN1	Q06525	465 aa	Known RBP	2.42	□□□□□ -2.02
SSK2	YNR031C	APP1	P53933	587 aa		2.41	□□□□□ -2.02
SSK2	YNR031C	SSA4	P22202	642 aa	Known RBP	2.4	□□□□□ -2.02
SSK2	YNR031C	POM152	P39685	1337 aa		2.4	□□□□□ -2.03
SSK2	YNR031C	DUR1,2	P32528	1835 aa	Known RBP	2.4	□□□□□ -2.03
SSK2	YNR031C	ALD2	P47771	506 aa		2.39	□□□□□ -2.03
SSK2	YNR031C	NUP157	P40064	1391 aa	Known RBP	2.37	□□□□□ -2.03
SSK2	YNR031C	RAV1	P47104	1357 aa		2.37	□□□□□ -2.03
SSK2	YNR031C	PDR11	P40550	1411 aa		2.37	□□□□□ -2.03
SSK2	YNR031C	BFR2	Q06631	534 aa	Known RBP	2.36	□□□□□ -2.03
SSK2	YNR031C	ISW2	Q08773	1120 aa		2.36	□□□□□ -2.03
SSK2	YNR031C	PTP3	P40048	928 aa		2.36	□□□□□ -2.03
SSK2	YNR031C	CTH1	P47976	325 aa		2.36	□□□□□ -2.03
SSK2	YNR031C	SSA2	P10592	639 aa	Known RBP	2.36	□□□□□ -2.03
SSK2	YNR031C	YVH1	Q02256	364 aa	Known RBP	2.36	□□□□□ -2.03
SSK2	YNR031C	IMH1	Q06704	911 aa	Known RBP	2.35	□□□□□ -2.03
SSK2	YNR031C	YPR117W	Q06116	2489 aa		2.35	□□□□□ -2.03
SSK2	YNR031C	MAL31	P38156	614 aa		2.35	□□□□□ -2.03
SSK2	YNR031C	SRF1	Q12516	437 aa		2.33	□□□□□ -2.04
SSK2	YNR031C	TFA1	P36100	482 aa		2.33	□□□□□ -2.04
SSK2	YNR031C	DIP2	Q12220	943 aa	Predicted RBP	2.33	□□□□□ -2.04
SSK2	YNR031C	SCT1	P32784	759 aa		2.32	□□□□□ -2.04
SSK2	YNR031C	FAS2	P19097	1887 aa	Known RBP	2.32	□□□□□ -2.04
SSK2	YNR031C	SIS1	P25294	352 aa	Known RBP	2.32	□□□□□ -2.04
SSK2	YNR031C	EAR1	Q03212	550 aa		2.31	□□□□□ -2.04
SSK2	YNR031C	PIB1	Q06651	286 aa		2.31	□□□□□ -2.04
SSK2	YNR031C	REB1	P21538	810 aa		2.31	□□□□□ -2.04
SSK2	YNR031C	PMD1	P32634	1753 aa		2.3	□□□□□ -2.04
SSK2	YNR031C	ETP1	P38748	585 aa	Known RBP	2.3	□□□□□ -2.04
SSK2	YNR031C	SPT7	P35177	1332 aa		2.3	□□□□□ -2.04
SSK2	YNR031C	RSF2	P46974	1380 aa		2.3	□□□□□ -2.04
SSK2	YNR031C	CUP1-1	P0CX80	61 aa		2.3	□□□□□ -2.04
SSK2	YNR031C	CUP1-2	P0CX81	61 aa		2.3	□□□□□ -2.04
SSK2	YNR031C	FLO1	P32768	1537 aa		2.29	□□□□□ -2.04
SSK2	YNR031C	ENT1	Q12518	454 aa		2.29	□□□□□ -2.04
SSK2	YNR031C	NUM1	Q00402	2748 aa		2.29	□□□□□ -2.04
SSK2	YNR031C	YMR084W	A2P2R3	262 aa		2.29	□□□□□ -2.04
SSK2	YNR031C	LEU3	P08638	886 aa		2.28	□□□□□ -2.04
SSK2	YNR031C	TOR1	P35169	2470 aa		2.27	□□□□□ -2.05
SSK2	YNR031C	YJL181W	P46987	611 aa		2.27	□□□□□ -2.05
SSK2	YNR031C	TAF7	Q05021	590 aa		2.27	□□□□□ -2.05
SSK2	YNR031C	TFC8	Q12308	588 aa		2.27	□□□□□ -2.05
SSK2	YNR031C	RTC1	Q08281	1341 aa		2.26	□□□□□ -2.05
SSK2	YNR031C	RTT106	P40161	455 aa		2.26	□□□□□ -2.05
SSK2	YNR031C	TIF6	Q12522	245 aa	Known RBP	2.25	□□□□□ -2.05
SSK2	YNR031C	LYS2	P07702	1392 aa		2.25	□□□□□ -2.05
SSK2	YNR031C	PSK1	P31374	1356 aa		2.25	□□□□□ -2.05
SSK2	YNR031C	AVT3	P36062	692 aa		2.25	□□□□□ -2.05
SSK2	YNR031C	NCS6	P53088	359 aa		2.25	□□□□□ -2.05
SSK2	YNR031C	YNR014W	P53719	212 aa		2.25	□□□□□ -2.05
SSK2	YNR031C	FRK1	Q03002	865 aa	Predicted RBP	2.24	□□□□□ -2.05
SSK2	YNR031C	ADE6	P38972	1358 aa	Known RBP	2.24	□□□□□ -2.05
SSK2	YNR031C	CDC27	P38042	758 aa		2.24	□□□□□ -2.05
SSK2	YNR031C	DLD1	P32891	587 aa		2.23	□□□□□ -2.05
SSK2	YNR031C	RPN11	P43588	306 aa	Known RBP	2.23	□□□□□ -2.05
SSK2	YNR031C	SAP155	P43612	1002 aa		2.23	□□□□□ -2.05
SSK2	YNR031C	RPS9B	P05755	195 aa	Known RBP	2.23	□□□□□ -2.05
SSK2	YNR031C	ALD3	P54114	506 aa		2.23	□□□□□ -2.05
SSK2	YNR031C	PRP40	P33203	583 aa	Known RBP	2.22	□□□□□ -2.05
SSK2	YNR031C	MRPL32	P25348	183 aa		2.22	□□□□□ -2.05
SSK2	YNR031C	FPK1	P53739	893 aa		2.21	□□□□□ -2.06
SSK2	YNR031C	SQS1	P53866	767 aa	Known RBP	2.21	□□□□□ -2.06
SSK2	YNR031C	PRP43	P53131	767 aa	Known RBP	2.21	□□□□□ -2.06
SSK2	YNR031C	SIR4	P11978	1358 aa		2.21	□□□□□ -2.06
SSK2	YNR031C	CTT1	P06115	562 aa		2.2	□□□□□ -2.06
SSK2	YNR031C	CLA4	P48562	842 aa		2.2	□□□□□ -2.06
SSK2	YNR031C	FBP1	P09201	348 aa		2.2	□□□□□ -2.06
SSK2	YNR031C	LYS4	P49367	693 aa	Predicted RBP	2.2	□□□□□ -2.06
SSK2	YNR031C	DCD1	P06773	312 aa		2.2	□□□□□ -2.06
SSK2	YNR031C	RPL17A	P05740	184 aa	Known RBP	2.2	□□□□□ -2.06
SSK2	YNR031C	YEF3	P16521	1044 aa	Known RBP	2.2	□□□□□ -2.06
SSK2	YNR031C	YER156C	P40093	338 aa	Known RBP	2.2	□□□□□ -2.06
SSK2	YNR031C	RPL17B	P46990	184 aa	Known RBP	2.2	□□□□□ -2.06
SSK2	YNR031C	FKS1	P38631	1876 aa	Known RBP	2.19	□□□□□ -2.06
SSK2	YNR031C	PAM1	P37304	830 aa	Known RBP	2.18	□□□□□ -2.06
SSK2	YNR031C	LAM6	Q08001	693 aa		2.18	□□□□□ -2.06
SSK2	YNR031C	SSM4	P40318	1319 aa		2.18	□□□□□ -2.06
SSK2	YNR031C	BDF1	P35817	686 aa		2.18	□□□□□ -2.06
SSK2	YNR031C	ROM2	P51862	1356 aa	Known RBP	2.18	□□□□□ -2.06
SSK2	YNR031C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	2.17	□□□□□ -2.06	not detected
SSK2	YNR031C	YFR016C	P43597	1233 aa	Known RBP	2.17	□□□□□ -2.06
SSK2	YNR031C	NPR2	P39923	615 aa		2.17	□□□□□ -2.06
SSK2	YNR031C	PSH1	Q12161	406 aa		2.17	□□□□□ -2.06
SSK2	YNR031C	YLR278C	Q05854	1341 aa		2.17	□□□□□ -2.06
SSK2	YNR031C	SPT21	P35209	758 aa		2.16	□□□□□ -2.06
SSK2	YNR031C	YGL015C	P33199	130 aa		2.16	□□□□□ -2.06
SSK2	YNR031C	ZDS2	P54786	942 aa		2.16	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms