RNA–Protein interactions for RNA: YMR135C

GID8, Transcript of Subunit of GID Complex, binds strongly to central component Vid30p, yeastyeast

Gene GID8, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GID8YMR135C RTG3P38165 486 aa11.3□□□□□ -0.6
GID8YMR135C BCK1Q01389 1478 aa11.29□□□□□ -0.6
GID8YMR135C FUN12P39730 1002 aaKnown RBP11.28□□□□□ -0.6
GID8YMR135C MLP1Q02455 1875 aaKnown RBP11.28□□□□□ -0.6
GID8YMR135C TYS1P36421 394 aaKnown RBP11.28□□□□□ -0.6
GID8YMR135C FKH1P40466 484 aa11.28□□□□□ -0.6
GID8YMR135C RVB2Q12464 471 aaKnown RBP11.28□□□□□ -0.6
GID8YMR135C IPL1P38991 367 aa11.27□□□□□ -0.61
GID8YMR135C ALD4P46367 519 aaKnown RBP11.25□□□□□ -0.61
GID8YMR135C TAF8Q03750 510 aa11.25□□□□□ -0.61
GID8YMR135C RAD9P14737 1309 aa11.24□□□□□ -0.61
GID8YMR135C YEF3P16521 1044 aaKnown RBP11.24□□□□□ -0.61
GID8YMR135C AVT3P36062 692 aa11.23□□□□□ -0.61
GID8YMR135C TRK1P12685 1235 aa11.22□□□□□ -0.61
GID8YMR135C CHZ1P40019 153 aaPredicted RBP11.22□□□□□ -0.61
GID8YMR135C YDL144CQ07589 356 aa11.22□□□□□ -0.61
GID8YMR135C RPC31P17890 251 aa11.2□□□□□ -0.62
GID8YMR135C YRB30P53107 440 aaPredicted RBP11.2□□□□□ -0.62
GID8YMR135C YML133CQ03099 1374 aa11.19□□□□□ -0.62
GID8YMR135C YLL067CQ07888 1374 aa11.19□□□□□ -0.62
GID8YMR135C YLL066CQ99208 1374 aa11.19□□□□□ -0.62
GID8YMR135C URN1Q06525 465 aaKnown RBP11.18□□□□□ -0.62
GID8YMR135C SUI2P20459 304 aaKnown RBP11.17□□□□□ -0.62
GID8YMR135C SNF2P22082 1703 aa11.17□□□□□ -0.62
GID8YMR135C IME2P32581 645 aa11.15□□□□□ -0.63
GID8YMR135C OPY1P38271 328 aa11.15□□□□□ -0.63
GID8YMR135C CAB1Q04430 367 aa11.14□□□□□ -0.63
GID8YMR135C HAP1P0CE41 1502 aa11.13□□□□□ -0.63
GID8YMR135C CDC27P38042 758 aa11.13□□□□□ -0.63
GID8YMR135C FPR3P38911 411 aaKnown RBP11.13□□□□□ -0.63
GID8YMR135C MPP10P47083 593 aaKnown RBP11.12□□□□□ -0.63
GID8YMR135C NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.12□□□□□ -0.63not detected
GID8YMR135C BNI1P41832 1953 aa11.1□□□□□ -0.63
GID8YMR135C NAP1P25293 417 aaKnown RBP11.1□□□□□ -0.63
GID8YMR135C RRP46P53256 223 aaPredicted RBP11.1□□□□□ -0.63
GID8YMR135C ITT1Q04638 464 aa11.09□□□□□ -0.63
GID8YMR135C ABP1P15891 592 aaKnown RBP11.07□□□□□ -0.64
GID8YMR135C YIR014WP40570 242 aa11.05□□□□□ -0.64
GID8YMR135C RTR1P40084 226 aaPredicted RBP11.04□□□□□ -0.64
GID8YMR135C SAP155P43612 1002 aa11.04□□□□□ -0.64
GID8YMR135C KRE5P22023 1365 aa11.04□□□□□ -0.64
GID8YMR135C PSK1P31374 1356 aa11.04□□□□□ -0.64
GID8YMR135C DNF3Q12674 1656 aa11.03□□□□□ -0.64
GID8YMR135C YFR016CP43597 1233 aaKnown RBP11.03□□□□□ -0.64
GID8YMR135C TAP42Q04372 366 aa11.01□□□□□ -0.65
GID8YMR135C THI22Q06490 572 aa11□□□□□ -0.65
GID8YMR135C RAD2P07276 1031 aa10.99□□□□□ -0.65
GID8YMR135C KAR2P16474 682 aaKnown RBP10.99□□□□□ -0.65
GID8YMR135C PRD1P25375 712 aa10.99□□□□□ -0.65
GID8YMR135C CLC1P17891 233 aa10.98□□□□□ -0.65
GID8YMR135C PPH3P32345 308 aa10.98□□□□□ -0.65
GID8YMR135C YIL092WP40497 633 aa10.98□□□□□ -0.65
GID8YMR135C HEF3P53978 1044 aaKnown RBP10.98□□□□□ -0.65
GID8YMR135C YPR148CQ06523 435 aa10.98□□□□□ -0.65
GID8YMR135C AUS1Q08409 1394 aa10.97□□□□□ -0.65
GID8YMR135C RCM1P53972 490 aa10.97□□□□□ -0.65
GID8YMR135C TPD3P31383 635 aa10.96□□□□□ -0.65
GID8YMR135C BUD27P43573 796 aaKnown RBP RIP-Chip data10.95□□□□□ -0.66not detected
GID8YMR135C SIR4P11978 1358 aa10.95□□□□□ -0.66
GID8YMR135C MRX12P47084 519 aa10.94□□□□□ -0.66
GID8YMR135C EAF7P53911 425 aaKnown RBP10.94□□□□□ -0.66
GID8YMR135C HIM1Q06674 414 aa10.94□□□□□ -0.66
GID8YMR135C PDI1P17967 522 aaKnown RBP10.93□□□□□ -0.66
GID8YMR135C DAL5P15365 543 aa10.92□□□□□ -0.66
GID8YMR135C MAP2P38174 421 aaKnown RBP10.92□□□□□ -0.66
GID8YMR135C POL32P47110 350 aa10.92□□□□□ -0.66
GID8YMR135C LEU2P04173 364 aaPredicted RBP10.91□□□□□ -0.66
GID8YMR135C YRF1-4O13559 1382 aa10.91□□□□□ -0.66
GID8YMR135C GRX4P32642 244 aa10.9□□□□□ -0.66
GID8YMR135C UBP10P53874 792 aaPredicted RBP10.9□□□□□ -0.66
GID8YMR135C RIA1P53893 1110 aa10.9□□□□□ -0.66
GID8YMR135C RTT109Q07794 436 aa10.9□□□□□ -0.66
GID8YMR135C SNF7P39929 240 aaKnown RBP10.89□□□□□ -0.67
GID8YMR135C PAP2P53632 584 aaKnown RBP10.89□□□□□ -0.67
GID8YMR135C CPS1P27614 576 aa10.88□□□□□ -0.67
GID8YMR135C CSE4P36012 229 aa10.88□□□□□ -0.67
GID8YMR135C MTR4P47047 1073 aaKnown RBP10.88□□□□□ -0.67
GID8YMR135C RTF1P53064 558 aa10.87□□□□□ -0.67
GID8YMR135C PCT1P13259 424 aa10.86□□□□□ -0.67
GID8YMR135C USO1P25386 1790 aa10.86□□□□□ -0.67
GID8YMR135C RPO41P13433 1351 aaKnown RBP10.85□□□□□ -0.67
GID8YMR135C YKR023WP36119 530 aaKnown RBP10.85□□□□□ -0.67
GID8YMR135C MAK21Q12176 1025 aaKnown RBP10.85□□□□□ -0.67
GID8YMR135C ROX1P25042 368 aa10.83□□□□□ -0.68
GID8YMR135C SPT21P35209 758 aa10.83□□□□□ -0.68
GID8YMR135C TY1B-NL2Q99337 1749 aaKnown RBP10.83□□□□□ -0.68
GID8YMR135C PRP43P53131 767 aaKnown RBP10.81□□□□□ -0.68
GID8YMR135C PUF6Q04373 656 aaKnown RBP10.81□□□□□ -0.68
GID8YMR135C APC1P53886 1748 aa10.81□□□□□ -0.68
GID8YMR135C YNR029CP53729 429 aaKnown RBP10.8□□□□□ -0.68
GID8YMR135C ADE6P38972 1358 aaKnown RBP10.8□□□□□ -0.68
GID8YMR135C RPS24AP0CX31 135 aaKnown RBP10.77□□□□□ -0.69
GID8YMR135C RPS24BP0CX32 135 aaKnown RBP10.77□□□□□ -0.69
GID8YMR135C TRP5P00931 707 aaKnown RBP10.76□□□□□ -0.69
GID8YMR135C CAB3P36076 571 aa10.76□□□□□ -0.69
GID8YMR135C MAK10Q02197 733 aa10.76□□□□□ -0.69
GID8YMR135C GAS4Q08271 471 aa10.76□□□□□ -0.69
GID8YMR135C VPS24P36095 224 aaKnown RBP10.75□□□□□ -0.69
GID8YMR135C AKL1P38080 1108 aaKnown RBP10.75□□□□□ -0.69
GID8YMR135C DJP1P40564 432 aa10.75□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms