RNA–Protein interactions for RNA: YML049C

RSE1, Transcript of Protein involved in pre-mRNA splicing, yeast

Gene RSE1, Length 4,086 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSE1	YML049C	NAP1	P25293	417 aa	Known RBP	4.21	□□□□□ -1.74
RSE1	YML049C	AVT3	P36062	692 aa		4.2	□□□□□ -1.74
RSE1	YML049C	SSA2	P10592	639 aa	Known RBP	4.19	□□□□□ -1.74
RSE1	YML049C	PEX21	P50091	288 aa		4.19	□□□□□ -1.74
RSE1	YML049C	LAM6	Q08001	693 aa		4.19	□□□□□ -1.74
RSE1	YML049C	BUD21	Q08492	214 aa	Predicted RBP	4.18	□□□□□ -1.74
RSE1	YML049C	SAS10	Q12136	610 aa	Predicted RBP	4.18	□□□□□ -1.74
RSE1	YML049C	SPT7	P35177	1332 aa		4.18	□□□□□ -1.74
RSE1	YML049C	YEF3	P16521	1044 aa	Known RBP	4.17	□□□□□ -1.74
RSE1	YML049C	RIA1	P53893	1110 aa		4.17	□□□□□ -1.74
RSE1	YML049C	ALD3	P54114	506 aa		4.15	□□□□□ -1.74
RSE1	YML049C	YKR023W	P36119	530 aa	Known RBP	4.15	□□□□□ -1.75
RSE1	YML049C	CFT1	Q06632	1357 aa	Known RBP	4.15	□□□□□ -1.75
RSE1	YML049C	ENP1	P38333	483 aa	Known RBP	4.14	□□□□□ -1.75
RSE1	YML049C	TAF5	P38129	798 aa		4.14	□□□□□ -1.75
RSE1	YML049C	YRF1-2	P40105	1681 aa		4.13	□□□□□ -1.75
RSE1	YML049C	RRT14	P40470	206 aa		4.13	□□□□□ -1.75
RSE1	YML049C	DIP2	Q12220	943 aa	Predicted RBP	4.13	□□□□□ -1.75
RSE1	YML049C	YNR029C	P53729	429 aa	Known RBP	4.13	□□□□□ -1.75
RSE1	YML049C	SAP155	P43612	1002 aa		4.12	□□□□□ -1.75
RSE1	YML049C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
RSE1	YML049C	RPN11	P43588	306 aa	Known RBP	4.12	□□□□□ -1.75
RSE1	YML049C	RRP5	Q05022	1729 aa	Known RBP	4.11	□□□□□ -1.75
RSE1	YML049C	SNF2	P22082	1703 aa		4.1	□□□□□ -1.75
RSE1	YML049C	MLP1	Q02455	1875 aa	Known RBP	4.1	□□□□□ -1.75
RSE1	YML049C	APC1	P53886	1748 aa		4.1	□□□□□ -1.75
RSE1	YML049C	RPS9B	P05755	195 aa	Known RBP	4.09	□□□□□ -1.75
RSE1	YML049C	URB1	P34241	1764 aa	Known RBP	4.09	□□□□□ -1.75
RSE1	YML049C	PRP45	P28004	379 aa	Predicted RBP	4.09	□□□□□ -1.76
RSE1	YML049C	FKS3	Q04952	1785 aa		4.08	□□□□□ -1.76
RSE1	YML049C	TYS1	P36421	394 aa	Known RBP	4.08	□□□□□ -1.76
RSE1	YML049C	YRF1-3	P0CX14	1859 aa		4.08	□□□□□ -1.76
RSE1	YML049C	YRF1-7	P0CX15	1859 aa		4.08	□□□□□ -1.76
RSE1	YML049C	YRF1-6	P53819	1859 aa		4.08	□□□□□ -1.76
RSE1	YML049C	ROM2	P51862	1356 aa	Known RBP	4.08	□□□□□ -1.76
RSE1	YML049C	RAV1	P47104	1357 aa		4.07	□□□□□ -1.76
RSE1	YML049C	SDH2	P21801	266 aa		4.06	□□□□□ -1.76
RSE1	YML049C	BDF1	P35817	686 aa		4.06	□□□□□ -1.76
RSE1	YML049C	MAC1	P35192	417 aa		4.06	□□□□□ -1.76
RSE1	YML049C	RPG1	P38249	964 aa	Known RBP	4.06	□□□□□ -1.76
RSE1	YML049C	PAF1	P38351	445 aa		4.06	□□□□□ -1.76
RSE1	YML049C	IES2	P40154	320 aa		4.05	□□□□□ -1.76
RSE1	YML049C	PUS5	Q06244	254 aa		4.05	□□□□□ -1.76
RSE1	YML049C	CTT1	P06115	562 aa		4.04	□□□□□ -1.76
RSE1	YML049C	YER156C	P40093	338 aa	Known RBP	4.04	□□□□□ -1.76
RSE1	YML049C	KRE5	P22023	1365 aa		4.04	□□□□□ -1.76
RSE1	YML049C	SSA4	P22202	642 aa	Known RBP	4.03	□□□□□ -1.76
RSE1	YML049C	PRP5	P21372	849 aa	Predicted RBP	4.03	□□□□□ -1.76
RSE1	YML049C	SQS1	P53866	767 aa	Known RBP	4.02	□□□□□ -1.77
RSE1	YML049C	RAD9	P14737	1309 aa		4.02	□□□□□ -1.77
RSE1	YML049C	RSF2	P46974	1380 aa		4.02	□□□□□ -1.77
RSE1	YML049C	LYS4	P49367	693 aa	Predicted RBP	4.02	□□□□□ -1.77
RSE1	YML049C	YLR419W	Q06698	1435 aa	Known RBP	4.01	□□□□□ -1.77
RSE1	YML049C	TCB1	Q12466	1186 aa		4.01	□□□□□ -1.77
RSE1	YML049C	HPC2	Q01448	625 aa		4.01	□□□□□ -1.77
RSE1	YML049C	YML133C	Q03099	1374 aa		4.01	□□□□□ -1.77
RSE1	YML049C	YLL067C	Q07888	1374 aa		4.01	□□□□□ -1.77
RSE1	YML049C	YLL066C	Q99208	1374 aa		4.01	□□□□□ -1.77
RSE1	YML049C	SCT1	P32784	759 aa		4	□□□□□ -1.77
RSE1	YML049C	MSN5	P52918	1224 aa		4	□□□□□ -1.77
RSE1	YML049C	RTC1	Q08281	1341 aa		4	□□□□□ -1.77
RSE1	YML049C	DUS1	P53759	423 aa	Known RBP	4	□□□□□ -1.77
RSE1	YML049C	BUG1	Q12191	341 aa		4	□□□□□ -1.77
RSE1	YML049C	CHZ1	P40019	153 aa	Predicted RBP	4	□□□□□ -1.77
RSE1	YML049C	MEC3	Q02574	474 aa		4	□□□□□ -1.77
RSE1	YML049C	DOT5	P40553	215 aa		3.99	□□□□□ -1.77
RSE1	YML049C	FPK1	P53739	893 aa		3.99	□□□□□ -1.77
RSE1	YML049C	SRF1	Q12516	437 aa		3.99	□□□□□ -1.77
RSE1	YML049C	YKL222C	P35995	705 aa		3.98	□□□□□ -1.77
RSE1	YML049C	RIM15	P43565	1770 aa		3.98	□□□□□ -1.77
RSE1	YML049C	UTP10	P42945	1769 aa	Known RBP	3.98	□□□□□ -1.77
RSE1	YML049C	YKL133C	P36066	463 aa		3.98	□□□□□ -1.77
RSE1	YML049C	PSK1	P31374	1356 aa		3.97	□□□□□ -1.77
RSE1	YML049C	MSB4	Q12317	492 aa		3.97	□□□□□ -1.77
RSE1	YML049C	CTH1	P47976	325 aa		3.96	□□□□□ -1.77
RSE1	YML049C	TIF6	Q12522	245 aa	Known RBP	3.96	□□□□□ -1.77
RSE1	YML049C	SLI15	P38283	698 aa		3.96	□□□□□ -1.78
RSE1	YML049C	NPR2	P39923	615 aa		3.96	□□□□□ -1.78
RSE1	YML049C	UTP22	P53254	1237 aa	Predicted RBP	3.96	□□□□□ -1.78
RSE1	YML049C	RSC30	P38781	883 aa		3.94	□□□□□ -1.78
RSE1	YML049C	FOX2	Q02207	900 aa	Known RBP	3.94	□□□□□ -1.78
RSE1	YML049C	CAB1	Q04430	367 aa		3.93	□□□□□ -1.78
RSE1	YML049C	ALD4	P46367	519 aa	Known RBP	3.93	□□□□□ -1.78
RSE1	YML049C	BSD2	P38356	321 aa		3.92	□□□□□ -1.78
RSE1	YML049C	EAR1	Q03212	550 aa		3.92	□□□□□ -1.78
RSE1	YML049C	EAF6	P47128	113 aa		3.92	□□□□□ -1.78
RSE1	YML049C	NYV1	Q12255	253 aa		3.92	□□□□□ -1.78
RSE1	YML049C	COB	P00163	385 aa		3.91	□□□□□ -1.78
RSE1	YML049C	VHR2	P40041	505 aa		3.91	□□□□□ -1.78
RSE1	YML049C	POM152	P39685	1337 aa		3.9	□□□□□ -1.78
RSE1	YML049C	RTG2	P32608	588 aa	Known RBP	3.9	□□□□□ -1.79
RSE1	YML049C	NCS6	P53088	359 aa		3.9	□□□□□ -1.79
RSE1	YML049C	ATG13	Q06628	738 aa		3.9	□□□□□ -1.79
RSE1	YML049C	MHP1	P43638	1398 aa		3.89	□□□□□ -1.79
RSE1	YML049C	THS1	P04801	734 aa	Known RBP	3.89	□□□□□ -1.79
RSE1	YML049C	RAD4	P14736	754 aa		3.89	□□□□□ -1.79
RSE1	YML049C	GLC3	P32775	704 aa		3.89	□□□□□ -1.79
RSE1	YML049C	AIM7	Q12156	149 aa		3.89	□□□□□ -1.79
RSE1	YML049C	RET1	P22276	1149 aa	Known RBP	3.89	□□□□□ -1.79
RSE1	YML049C	ETP1	P38748	585 aa	Known RBP	3.88	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms