RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W EAF7P53911 425 aaKnown RBP14.36□□□□□ -0.11
RTF1YGL244W TRK1P12685 1235 aa14.36□□□□□ -0.11
RTF1YGL244W TAF8Q03750 510 aa14.36□□□□□ -0.11
RTF1YGL244W CAB3P36076 571 aa14.35□□□□□ -0.11
RTF1YGL244W YEF3P16521 1044 aaKnown RBP14.33□□□□□ -0.11
RTF1YGL244W ABP1P15891 592 aaKnown RBP14.31□□□□□ -0.12
RTF1YGL244W MPP10P47083 593 aaKnown RBP14.3□□□□□ -0.12
RTF1YGL244W SNF2P22082 1703 aa14.3□□□□□ -0.12
RTF1YGL244W YIR014WP40570 242 aa14.29□□□□□ -0.12
RTF1YGL244W ALD4P46367 519 aaKnown RBP14.29□□□□□ -0.12
RTF1YGL244W NAB6Q03735 1134 aaKnown RBP RIP-Chip data14.29□□□□□ -0.12not detected
RTF1YGL244W BCK1Q01389 1478 aa14.28□□□□□ -0.12
RTF1YGL244W RAD9P14737 1309 aa14.28□□□□□ -0.12
RTF1YGL244W TYS1P36421 394 aaKnown RBP14.27□□□□□ -0.12
RTF1YGL244W IPL1P38991 367 aa14.24□□□□□ -0.13
RTF1YGL244W NAP1P25293 417 aaKnown RBP14.23□□□□□ -0.13
RTF1YGL244W RAD2P07276 1031 aa14.21□□□□□ -0.13
RTF1YGL244W EBP2P36049 427 aaKnown RBP14.21□□□□□ -0.13
RTF1YGL244W RTR1P40084 226 aaPredicted RBP14.21□□□□□ -0.13
RTF1YGL244W URN1Q06525 465 aaKnown RBP14.2□□□□□ -0.14
RTF1YGL244W SNF7P39929 240 aaKnown RBP14.19□□□□□ -0.14
RTF1YGL244W YML133CQ03099 1374 aa14.19□□□□□ -0.14
RTF1YGL244W YLL067CQ07888 1374 aa14.19□□□□□ -0.14
RTF1YGL244W YLL066CQ99208 1374 aa14.19□□□□□ -0.14
RTF1YGL244W SAP155P43612 1002 aa14.18□□□□□ -0.14
RTF1YGL244W RRP46P53256 223 aaPredicted RBP14.17□□□□□ -0.14
RTF1YGL244W CAB1Q04430 367 aa14.17□□□□□ -0.14
RTF1YGL244W KRE5P22023 1365 aa14.14□□□□□ -0.15
RTF1YGL244W HAP1P0CE41 1502 aa14.13□□□□□ -0.15
RTF1YGL244W BUD27P43573 796 aaKnown RBP RIP-Chip data14.13□□□□□ -0.15not detected
RTF1YGL244W KAR2P16474 682 aaKnown RBP14.1□□□□□ -0.15
RTF1YGL244W TPD3P31383 635 aa14.1□□□□□ -0.15
RTF1YGL244W YIL092WP40497 633 aa14.1□□□□□ -0.15
RTF1YGL244W DAL5P15365 543 aa14.1□□□□□ -0.15
RTF1YGL244W ROX1P25042 368 aa14.09□□□□□ -0.15
RTF1YGL244W PCT1P13259 424 aa14.08□□□□□ -0.16
RTF1YGL244W PRD1P25375 712 aa14.08□□□□□ -0.16
RTF1YGL244W THI22Q06490 572 aa14.08□□□□□ -0.16
RTF1YGL244W POL32P47110 350 aa14.07□□□□□ -0.16
RTF1YGL244W HEF3P53978 1044 aaKnown RBP14.04□□□□□ -0.16
RTF1YGL244W DNF3Q12674 1656 aa14.04□□□□□ -0.16
RTF1YGL244W TAP42Q04372 366 aa14.04□□□□□ -0.16
RTF1YGL244W PAP2P53632 584 aaKnown RBP14.02□□□□□ -0.16
RTF1YGL244W SIR4P11978 1358 aa14.02□□□□□ -0.17
RTF1YGL244W PSK1P31374 1356 aa14.01□□□□□ -0.17
RTF1YGL244W DJP1P40564 432 aa14.01□□□□□ -0.17
RTF1YGL244W MAK21Q12176 1025 aaKnown RBP14.01□□□□□ -0.17
RTF1YGL244W PDI1P17967 522 aaKnown RBP14□□□□□ -0.17
RTF1YGL244W CSE4P36012 229 aa14□□□□□ -0.17
RTF1YGL244W VPS24P36095 224 aaKnown RBP14□□□□□ -0.17
RTF1YGL244W RCM1P53972 490 aa13.98□□□□□ -0.17
RTF1YGL244W YRF1-4O13559 1382 aa13.98□□□□□ -0.17
RTF1YGL244W PUF6Q04373 656 aaKnown RBP13.98□□□□□ -0.17
RTF1YGL244W HIM1Q06674 414 aa13.98□□□□□ -0.17
RTF1YGL244W RTT109Q07794 436 aa13.98□□□□□ -0.17
RTF1YGL244W MRX12P47084 519 aa13.96□□□□□ -0.17
RTF1YGL244W PPH3P32345 308 aa13.95□□□□□ -0.18
RTF1YGL244W MNN4P36044 1178 aa13.95□□□□□ -0.18
RTF1YGL244W SLN1P39928 1220 aaPredicted RBP13.95□□□□□ -0.18
RTF1YGL244W GRX4P32642 244 aa13.94□□□□□ -0.18
RTF1YGL244W RTF1P53064 558 aa13.93□□□□□ -0.18
RTF1YGL244W AUS1Q08409 1394 aa13.93□□□□□ -0.18
RTF1YGL244W LEU2P04173 364 aaPredicted RBP13.91□□□□□ -0.18
RTF1YGL244W MSP1P28737 362 aa13.91□□□□□ -0.18
RTF1YGL244W TCB2P48231 1178 aa13.91□□□□□ -0.18
RTF1YGL244W LSP1Q12230 341 aaKnown RBP13.91□□□□□ -0.18
RTF1YGL244W RLF2Q12495 606 aa13.88□□□□□ -0.19
RTF1YGL244W MTR4P47047 1073 aaKnown RBP13.86□□□□□ -0.19
RTF1YGL244W ITT1Q04638 464 aa13.86□□□□□ -0.19
RTF1YGL244W EDE1P34216 1381 aa13.86□□□□□ -0.19
RTF1YGL244W RIA1P53893 1110 aa13.85□□□□□ -0.19
RTF1YGL244W ARL1P38116 183 aaKnown RBP13.85□□□□□ -0.19
RTF1YGL244W ECM16Q04217 1267 aaKnown RBP13.85□□□□□ -0.19
RTF1YGL244W TRP5P00931 707 aaKnown RBP13.84□□□□□ -0.19
RTF1YGL244W RPO41P13433 1351 aaKnown RBP13.83□□□□□ -0.19
RTF1YGL244W USO1P25386 1790 aa13.83□□□□□ -0.2
RTF1YGL244W ITC1P53125 1264 aa13.81□□□□□ -0.2
RTF1YGL244W CPS1P27614 576 aa13.8□□□□□ -0.2
RTF1YGL244W BNI1P41832 1953 aa13.79□□□□□ -0.2
RTF1YGL244W NOT3P06102 836 aaKnown RBP13.79□□□□□ -0.2
RTF1YGL244W TEA1P47988 759 aa13.79□□□□□ -0.2
RTF1YGL244W GYP7P48365 746 aa13.77□□□□□ -0.21
RTF1YGL244W KNS1P32350 737 aaPredicted RBP13.76□□□□□ -0.21
RTF1YGL244W GAS4Q08271 471 aa13.76□□□□□ -0.21
RTF1YGL244W SRS2P12954 1174 aa13.75□□□□□ -0.21
RTF1YGL244W AKL1P38080 1108 aaKnown RBP13.75□□□□□ -0.21
RTF1YGL244W DSD1P53095 428 aa13.75□□□□□ -0.21
RTF1YGL244W RAD50P12753 1312 aa13.74□□□□□ -0.21
RTF1YGL244W ILV3P39522 585 aaKnown RBP13.74□□□□□ -0.21
RTF1YGL244W BUB1P41695 1021 aaKnown RBP RIP-Chip data13.74□□□□□ -0.21not detected
RTF1YGL244W RRT14P40470 206 aa13.73□□□□□ -0.21
RTF1YGL244W NKP2Q06162 153 aa13.73□□□□□ -0.21
RTF1YGL244W YNL050CP53952 270 aa13.72□□□□□ -0.21
RTF1YGL244W TY1B-NL2Q99337 1749 aaKnown RBP13.72□□□□□ -0.21
RTF1YGL244W RPS24AP0CX31 135 aaKnown RBP13.72□□□□□ -0.21
RTF1YGL244W RPS24BP0CX32 135 aaKnown RBP13.72□□□□□ -0.21
RTF1YGL244W APC1P53886 1748 aa13.71□□□□□ -0.21
RTF1YGL244W DPS1P04802 557 aaKnown RBP13.7□□□□□ -0.22
RTF1YGL244W DLD1P32891 587 aa13.7□□□□□ -0.22
RTF1YGL244W YNG2P38806 282 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms