RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W SNU71P53207 620 aaKnown RBP7.51□□□□□ -1.21
UBC6YER100W YNL108CP53929 270 aa7.51□□□□□ -1.21
UBC6YER100W TFB4Q12004 338 aa7.51□□□□□ -1.21
UBC6YER100W ILV3P39522 585 aaKnown RBP7.5□□□□□ -1.21
UBC6YER100W MSB4Q12317 492 aa7.5□□□□□ -1.21
UBC6YER100W HTA1P04911 132 aaKnown RBP7.49□□□□□ -1.21
UBC6YER100W HTA2P04912 132 aa7.49□□□□□ -1.21
UBC6YER100W ESS1P22696 170 aa7.49□□□□□ -1.21
UBC6YER100W EAP1P36041 632 aaKnown RBP7.49□□□□□ -1.21
UBC6YER100W DCW1P36091 449 aa7.49□□□□□ -1.21
UBC6YER100W MRX10Q05648 414 aa7.49□□□□□ -1.21
UBC6YER100W YPR109WQ06104 294 aa7.49□□□□□ -1.21
UBC6YER100W PUP1P25043 261 aa7.48□□□□□ -1.21
UBC6YER100W HEM3P28789 327 aa7.48□□□□□ -1.21
UBC6YER100W YOL036WQ08206 761 aa7.48□□□□□ -1.21
UBC6YER100W SEN54Q02825 467 aaPredicted RBP7.47□□□□□ -1.21
UBC6YER100W MAK16P10962 306 aaPredicted RBP7.46□□□□□ -1.22
UBC6YER100W SLI15P38283 698 aa7.46□□□□□ -1.22
UBC6YER100W RSC30P38781 883 aa7.46□□□□□ -1.22
UBC6YER100W RIM21P48565 533 aa7.46□□□□□ -1.22
UBC6YER100W ENO1P00924 437 aaKnown RBP7.45□□□□□ -1.22
UBC6YER100W ENO2P00925 437 aaKnown RBP7.45□□□□□ -1.22
UBC6YER100W ARG8P18544 423 aa7.45□□□□□ -1.22
UBC6YER100W SCJ1P25303 377 aa7.45□□□□□ -1.22
UBC6YER100W YJU3P28321 313 aa7.45□□□□□ -1.22
UBC6YER100W LAM6Q08001 693 aa7.45□□□□□ -1.22
UBC6YER100W DAN4P47179 1161 aa7.44□□□□□ -1.22
UBC6YER100W YPP1P46951 817 aa7.43□□□□□ -1.22
UBC6YER100W RTF1P53064 558 aa7.43□□□□□ -1.22
UBC6YER100W YNL035CP53962 389 aaKnown RBP7.43□□□□□ -1.22
UBC6YER100W NAF1P53919 492 aaKnown RBP7.42□□□□□ -1.22
UBC6YER100W YML083CQ04526 418 aa7.42□□□□□ -1.22
UBC6YER100W YDJ1P25491 409 aaKnown RBP7.41□□□□□ -1.22
UBC6YER100W SEC61P32915 480 aa7.41□□□□□ -1.22
UBC6YER100W TGL4P36165 910 aa7.41□□□□□ -1.22
UBC6YER100W PEP12P32854 288 aa7.4□□□□□ -1.22
UBC6YER100W BCK2P33306 851 aa7.4□□□□□ -1.22
UBC6YER100W PAM1P37304 830 aaKnown RBP7.4□□□□□ -1.22
UBC6YER100W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.4□□□□□ -1.22not detected
UBC6YER100W HAT1Q12341 374 aa7.4□□□□□ -1.22
UBC6YER100W PEX21P50091 288 aa7.39□□□□□ -1.23
UBC6YER100W CDC73Q06697 393 aa7.39□□□□□ -1.23
UBC6YER100W NAP1P25293 417 aaKnown RBP7.38□□□□□ -1.23
UBC6YER100W ASF1P32447 279 aa7.38□□□□□ -1.23
UBC6YER100W STM1P39015 273 aaKnown RBP7.38□□□□□ -1.23
UBC6YER100W YEL023CP39992 682 aa7.38□□□□□ -1.23
UBC6YER100W RRN6P32786 894 aa7.37□□□□□ -1.23
UBC6YER100W YNL115CP53925 644 aa7.37□□□□□ -1.23
UBC6YER100W SLY41P22215 453 aa7.36□□□□□ -1.23
UBC6YER100W SAP30P38429 201 aa7.36□□□□□ -1.23
UBC6YER100W TUM1Q08686 304 aaKnown RBP7.36□□□□□ -1.23
UBC6YER100W PTC4P38089 393 aa7.35□□□□□ -1.23
UBC6YER100W SEC20P28791 383 aa7.34□□□□□ -1.23
UBC6YER100W MET10P39692 1035 aa7.34□□□□□ -1.23
UBC6YER100W MCM16Q12262 181 aa7.33□□□□□ -1.24
UBC6YER100W TRM1P15565 570 aaKnown RBP7.32□□□□□ -1.24
UBC6YER100W RDS2P19541 446 aaKnown RBP7.32□□□□□ -1.24
UBC6YER100W PUS6P53294 404 aa7.32□□□□□ -1.24
UBC6YER100W JIP4Q03361 876 aa7.32□□□□□ -1.24
UBC6YER100W GAL2P13181 574 aa7.3□□□□□ -1.24
UBC6YER100W TFG1P41895 735 aaPredicted RBP7.3□□□□□ -1.24
UBC6YER100W DPL1Q05567 589 aa7.3□□□□□ -1.24
UBC6YER100W YBL113CQ7M4S9 792 aa7.29□□□□□ -1.24
UBC6YER100W CHL1P22516 861 aaPredicted RBP7.28□□□□□ -1.24
UBC6YER100W ECM23Q02710 187 aa7.28□□□□□ -1.24
UBC6YER100W YRR1Q12172 810 aa7.28□□□□□ -1.24
UBC6YER100W MSC6Q08818 692 aaKnown RBP7.27□□□□□ -1.25
UBC6YER100W IPL1P38991 367 aa7.26□□□□□ -1.25
UBC6YER100W PUF6Q04373 656 aaKnown RBP7.26□□□□□ -1.25
UBC6YER100W ISU2Q12056 156 aa7.26□□□□□ -1.25
UBC6YER100W ERP5P38819 212 aa7.25□□□□□ -1.25
UBC6YER100W ATG3P40344 310 aa7.25□□□□□ -1.25
UBC6YER100W CWC15Q03772 175 aaKnown RBP7.25□□□□□ -1.25
UBC6YER100W ITT1Q04638 464 aa7.25□□□□□ -1.25
UBC6YER100W MPC54Q08550 464 aa7.25□□□□□ -1.25
UBC6YER100W TRL1P09880 827 aaKnown RBP7.24□□□□□ -1.25
UBC6YER100W UBX7P38349 436 aa7.24□□□□□ -1.25
UBC6YER100W PRE3P38624 215 aa7.24□□□□□ -1.25
UBC6YER100W SVF1Q05515 481 aa7.24□□□□□ -1.25
UBC6YER100W RRP15Q06511 250 aaPredicted RBP7.24□□□□□ -1.25
UBC6YER100W TBF1Q02457 562 aa7.23□□□□□ -1.25
UBC6YER100W UTP13Q05946 817 aaKnown RBP7.23□□□□□ -1.25
UBC6YER100W YDL129WQ07555 291 aa7.23□□□□□ -1.25
UBC6YER100W FRA1Q07825 749 aa7.23□□□□□ -1.25
UBC6YER100W ENV9Q08651 330 aa7.23□□□□□ -1.25
UBC6YER100W YEL077CQ3E7X8 1277 aa7.23□□□□□ -1.25
UBC6YER100W PHO87P25360 923 aa7.22□□□□□ -1.25
UBC6YER100W PPX1P38698 397 aa7.22□□□□□ -1.25
UBC6YER100W KEX2P13134 814 aa7.21□□□□□ -1.26
UBC6YER100W NUD1P32336 851 aa7.21□□□□□ -1.26
UBC6YER100W KTR7P40504 517 aa7.21□□□□□ -1.26
UBC6YER100W EMP47P43555 445 aa7.21□□□□□ -1.26
UBC6YER100W KAR5Q04746 504 aa7.21□□□□□ -1.26
UBC6YER100W YTA7P40340 1379 aa7.2□□□□□ -1.26
UBC6YER100W HAP4P14064 554 aa7.2□□□□□ -1.26
UBC6YER100W ATG1P53104 897 aa7.2□□□□□ -1.26
UBC6YER100W TPS3P38426 1054 aaKnown RBP7.19□□□□□ -1.26
UBC6YER100W YHL050CP38721 697 aa7.19□□□□□ -1.26
UBC6YER100W YHR219WP38900 624 aa7.19□□□□□ -1.26
UBC6YER100W MDJ2P42834 146 aa7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms