RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 SCAPERQ9BY12 1400 aa16.7■□□□□ 0.26
PHGDH-222ENST00000641587 PLCH2O75038 1416 aa16.69■□□□□ 0.26
PHGDH-222ENST00000641587 MAGI2Q86UL8 1455 aa16.68■□□□□ 0.26
PHGDH-222ENST00000641587 KIF14Q15058 1648 aa16.68■□□□□ 0.26
PHGDH-222ENST00000641587 MYO5CQ9NQX4 1742 aa16.67■□□□□ 0.26
PHGDH-222ENST00000641587 ATP1B4Q9UN42 357 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-222ENST00000641587 ARHGAP35Q9NRY4 1499 aa16.66■□□□□ 0.26
PHGDH-222ENST00000641587 ARHGEF12Q9NZN5 1544 aa16.64■□□□□ 0.25
PHGDH-222ENST00000641587 LRRIQ1Q96JM4 1722 aa16.63■□□□□ 0.25
PHGDH-222ENST00000641587 C9orf84Q5VXU9 1444 aa16.62■□□□□ 0.25
PHGDH-222ENST00000641587 ATP10AO60312 1499 aa16.62■□□□□ 0.25
PHGDH-222ENST00000641587 UBTFP17480 764 aaKnown RBP16.62■□□□□ 0.25
PHGDH-222ENST00000641587 FMN1Q68DA7 1419 aa16.62■□□□□ 0.25
PHGDH-222ENST00000641587 CEBPAP49715 358 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-222ENST00000641587 ARHGAP5Q13017 1502 aa16.6■□□□□ 0.25
PHGDH-222ENST00000641587 EFCAB2Q5VUJ9 269 aa16.59■□□□□ 0.25
PHGDH-222ENST00000641587 PREX1Q8TCU6 1659 aa16.59■□□□□ 0.25
PHGDH-222ENST00000641587 TROQ12816 1431 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-222ENST00000641587 ZNF518AQ6AHZ1 1483 aa16.58■□□□□ 0.24
PHGDH-222ENST00000641587 KDM5CP41229 1560 aa16.58■□□□□ 0.24
PHGDH-222ENST00000641587 AFAP1Q8N556 730 aa16.57■□□□□ 0.24
PHGDH-222ENST00000641587 DIP2CQ9Y2E4 1556 aa16.56■□□□□ 0.24
PHGDH-222ENST00000641587 CERKQ8TCT0 537 aa16.56■□□□□ 0.24
PHGDH-222ENST00000641587 CDC42BPBQ9Y5S2 1711 aa16.56■□□□□ 0.24
PHGDH-222ENST00000641587 ABCA6Q8N139 1617 aa16.55■□□□□ 0.24
PHGDH-222ENST00000641587 CDK11AQ9UQ88 783 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-222ENST00000641587 STRCQ7RTU9 1775 aa16.54■□□□□ 0.24
PHGDH-222ENST00000641587 CLIP1P30622 1438 aa16.53■□□□□ 0.24
PHGDH-222ENST00000641587 MYT1LQ9UL68 1186 aa16.52■□□□□ 0.24
PHGDH-222ENST00000641587 PREX2Q70Z35 1606 aa16.51■□□□□ 0.23
PHGDH-222ENST00000641587 ABCC1P33527 1531 aa16.5■□□□□ 0.23
PHGDH-222ENST00000641587 C3P01024 1663 aa16.5■□□□□ 0.23
PHGDH-222ENST00000641587 TRAPPC8Q9Y2L5 1435 aa16.5■□□□□ 0.23
PHGDH-222ENST00000641587 ITSN2Q9NZM3 1697 aa16.5■□□□□ 0.23
PHGDH-222ENST00000641587 UHRF1BP1Q6BDS2 1440 aa16.49■□□□□ 0.23
PHGDH-222ENST00000641587 REREQ9P2R6 1566 aa16.49■□□□□ 0.23
PHGDH-222ENST00000641587 CHIC1Q5VXU3 224 aa16.48■□□□□ 0.23
PHGDH-222ENST00000641587 MLH3Q9UHC1 1453 aa16.48■□□□□ 0.23
PHGDH-222ENST00000641587 CDC42BPAQ5VT25 1732 aa16.46■□□□□ 0.23
PHGDH-222ENST00000641587 KIDINS220Q9ULH0 1771 aa16.46■□□□□ 0.22
PHGDH-222ENST00000641587 SETD1BQ9UPS6 1966 aaKnown RBP16.46■□□□□ 0.22
PHGDH-222ENST00000641587 AGLP35573 1532 aa16.44■□□□□ 0.22
PHGDH-222ENST00000641587 CASKIN1Q8WXD9 1431 aa16.44■□□□□ 0.22
PHGDH-222ENST00000641587 CCDC18Q5T9S5 1454 aa16.43■□□□□ 0.22
PHGDH-222ENST00000641587 SAMD9LQ8IVG5 1584 aa16.4■□□□□ 0.22
PHGDH-222ENST00000641587 SYCP2Q9BX26 1530 aa16.39■□□□□ 0.21
PHGDH-222ENST00000641587 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
PHGDH-222ENST00000641587 PTPRTO14522 1441 aa16.37■□□□□ 0.21
PHGDH-222ENST00000641587 FYCO1Q9BQS8 1478 aa16.37■□□□□ 0.21
PHGDH-222ENST00000641587 ESF1Q9H501 851 aaKnown RBP16.37■□□□□ 0.21
PHGDH-222ENST00000641587 ZNF777Q9ULD5 760 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-222ENST00000641587 SUPT6HQ7KZ85 1726 aaKnown RBP16.36■□□□□ 0.21
PHGDH-222ENST00000641587 LTBP4Q8N2S1 1624 aa16.36■□□□□ 0.21
PHGDH-222ENST00000641587 DISP3Q9P2K9 1392 aa16.35■□□□□ 0.21
PHGDH-222ENST00000641587 NCOA1Q15788 1441 aa16.35■□□□□ 0.21
PHGDH-222ENST00000641587 GPATCH8Q9UKJ3 1502 aaKnown RBP16.35■□□□□ 0.21
PHGDH-222ENST00000641587 ILDR2Q71H61 639 aa16.34■□□□□ 0.21
PHGDH-222ENST00000641587 CNTLNQ9NXG0 1405 aa16.34■□□□□ 0.21
PHGDH-222ENST00000641587 MROH2AA6NES4 1674 aa16.34■□□□□ 0.21
PHGDH-222ENST00000641587 HNRNPMP52272 730 aaKnown RBP eCLIP16.33■□□□□ 0.21e-6■■■■□ 22.8
PHGDH-222ENST00000641587 CAMSAP1Q5T5Y3 1602 aa16.33■□□□□ 0.2
PHGDH-222ENST00000641587 CLTCQ00610 1675 aaKnown RBP16.32■□□□□ 0.2
PHGDH-222ENST00000641587 ATP7AQ04656 1500 aa16.32■□□□□ 0.2
PHGDH-222ENST00000641587 INO80Q9ULG1 1556 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-222ENST00000641587 SPAG9O60271 1321 aaKnown RBP16.31■□□□□ 0.2
PHGDH-222ENST00000641587 PLXNC1O60486 1568 aa16.3■□□□□ 0.2
PHGDH-222ENST00000641587 NPATQ14207 1427 aa16.29■□□□□ 0.2
PHGDH-222ENST00000641587 ZMYM3Q14202 1370 aa16.29■□□□□ 0.2
PHGDH-222ENST00000641587 MYO3AQ8NEV4 1616 aa16.28■□□□□ 0.2
PHGDH-222ENST00000641587 SPATA31D1Q6ZQQ2 1576 aa16.28■□□□□ 0.2
PHGDH-222ENST00000641587 NCKAP5LQ9HCH0 1330 aa16.27■□□□□ 0.2
PHGDH-222ENST00000641587 A2MP01023 1474 aa16.27■□□□□ 0.19
PHGDH-222ENST00000641587 ZNF142P52746 1687 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-222ENST00000641587 CFDP1Q9UEE9 299 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-222ENST00000641587 KIAA1107Q9UPP5 1409 aa16.25■□□□□ 0.19
PHGDH-222ENST00000641587 CCNB3Q8WWL7 1395 aa16.25■□□□□ 0.19
PHGDH-222ENST00000641587 ZNF335Q9H4Z2 1342 aaPredicted RBP16.24■□□□□ 0.19
PHGDH-222ENST00000641587 CEP170BQ9Y4F5 1589 aaPredicted RBP16.24■□□□□ 0.19
PHGDH-222ENST00000641587 IQSEC2Q5JU85 1478 aa16.23■□□□□ 0.19
PHGDH-222ENST00000641587 PLEKHH2Q8IVE3 1493 aa16.23■□□□□ 0.19
PHGDH-222ENST00000641587 TIAM1Q13009 1591 aa16.23■□□□□ 0.19
PHGDH-222ENST00000641587 PTPRKQ15262 1439 aa16.23■□□□□ 0.19
PHGDH-222ENST00000641587 GGT6Q6P531 493 aa16.23■□□□□ 0.19
PHGDH-222ENST00000641587 MTUS2Q5JR59 1369 aa16.23■□□□□ 0.19
PHGDH-222ENST00000641587 ZNF644Q9H582 1327 aaPredicted RBP16.22■□□□□ 0.19
PHGDH-222ENST00000641587 ADGBQ8N7X0 1667 aa16.21■□□□□ 0.19
PHGDH-222ENST00000641587 PLA2R1Q13018 1463 aa16.2■□□□□ 0.18
PHGDH-222ENST00000641587 TCOF1Q13428 1488 aaKnown RBP16.2■□□□□ 0.18
PHGDH-222ENST00000641587 SOCS7O14512 581 aa16.19■□□□□ 0.18
PHGDH-222ENST00000641587 MBD5Q9P267 1494 aa16.18■□□□□ 0.18
PHGDH-222ENST00000641587 EHBP1L1Q8N3D4 1523 aa16.18■□□□□ 0.18
PHGDH-222ENST00000641587 DNMT1P26358 1616 aaKnown RBP16.16■□□□□ 0.18
PHGDH-222ENST00000641587 UBAP1LF5GYI3 381 aa16.15■□□□□ 0.18
PHGDH-222ENST00000641587 PKD2Q13563 968 aa16.15■□□□□ 0.18
PHGDH-222ENST00000641587 A2ML1A8K2U0 1454 aa16.14■□□□□ 0.17
PHGDH-222ENST00000641587 CEP162Q5TB80 1403 aa16.12■□□□□ 0.17
PHGDH-222ENST00000641587 PPP6R1Q9UPN7 881 aa16.12■□□□□ 0.17
PHGDH-222ENST00000641587 NEURL4Q96JN8 1562 aa16.12■□□□□ 0.17
PHGDH-222ENST00000641587 DHX29Q7Z478 1369 aaKnown RBP16.12■□□□□ 0.17
PHGDH-222ENST00000641587 RTEL1-TNFRSF6BF6WH68 1400 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms