RNA–Protein interactions for RNA: ENST00000640521.1

MED17-227, Transcript of mediator complex subunit 17, human

TSL 5 BASIC

Gene MED17, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-227	ENST00000640521	CAMSAP2	Q08AD1	1489 aa		34.17	■■■■□ 3.06
MED17-227	ENST00000640521	PLEKHD1	A6NEE1	506 aa		34.16	■■■■□ 3.06
MED17-227	ENST00000640521	CFDP1	Q9UEE9	299 aa	Predicted RBP	34.14	■■■■□ 3.06
MED17-227	ENST00000640521	ABCC10	Q5T3U5	1492 aa		34.12	■■■■□ 3.05
MED17-227	ENST00000640521	MIER1	Q8N108	512 aa		34.11	■■■■□ 3.05
MED17-227	ENST00000640521	CDC42BPA	Q5VT25	1732 aa		34.1	■■■■□ 3.05
MED17-227	ENST00000640521	DENND4B	O75064	1496 aa	Predicted RBP	34.08	■■■■□ 3.05
MED17-227	ENST00000640521	PPP1R15A	O75807	674 aa	Predicted RBP	34.08	■■■■□ 3.05
MED17-227	ENST00000640521	ERCC6L2	Q5T890	1561 aa		34.04	■■■■□ 3.04
MED17-227	ENST00000640521	CROCC2	H7BZ55	1655 aa		34.04	■■■■□ 3.04
MED17-227	ENST00000640521	ADGB	Q8N7X0	1667 aa		34.03	■■■■□ 3.04
MED17-227	ENST00000640521	ACIN1	Q9UKV3	1341 aa	Known RBP	34.03	■■■■□ 3.04
MED17-227	ENST00000640521	TRIM52	Q96A61	297 aa		34.03	■■■■□ 3.04
MED17-227	ENST00000640521	CLASP1	Q7Z460	1538 aa		34.03	■■■■□ 3.04
MED17-227	ENST00000640521	TONSL	Q96HA7	1378 aa		34.01	■■■■□ 3.04
MED17-227	ENST00000640521	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.97	■■■■□ 3.03
MED17-227	ENST00000640521	ADGRL2	O95490	1459 aa		33.97	■■■■□ 3.03
MED17-227	ENST00000640521	MPHOSPH9	Q99550	1183 aa		33.96	■■■■□ 3.03
MED17-227	ENST00000640521	SCAF1	Q9H7N4	1312 aa	Known RBP	33.95	■■■■□ 3.02
MED17-227	ENST00000640521	NCOA1	Q15788	1441 aa		33.94	■■■■□ 3.02
MED17-227	ENST00000640521	ABCC2	Q92887	1545 aa		33.92	■■■■□ 3.02
MED17-227	ENST00000640521	KDM5B	Q9UGL1	1544 aa		33.9	■■■■□ 3.02
MED17-227	ENST00000640521	CENPB	P07199	599 aa	Predicted RBP	33.86	■■■■□ 3.01
MED17-227	ENST00000640521	SHANK2	Q9UPX8	1470 aa		33.85	■■■■□ 3.01
MED17-227	ENST00000640521	PREX2	Q70Z35	1606 aa		33.84	■■■■□ 3.01
MED17-227	ENST00000640521	ANKRD30A	Q9BXX3	1397 aa		33.83	■■■■□ 3.01
MED17-227	ENST00000640521	CDC42BPB	Q9Y5S2	1711 aa		33.83	■■■■□ 3.01
MED17-227	ENST00000640521	ARHGEF5	Q12774	1597 aa		33.8	■■■■□ 3
MED17-227	ENST00000640521	SAMD9L	Q8IVG5	1584 aa		33.77	■■■■□ 3
MED17-227	ENST00000640521	C9orf84	Q5VXU9	1444 aa		33.77	■■■■□ 3
MED17-227	ENST00000640521	ANKRD30B	Q9BXX2	1392 aa		33.76	■■■■□ 3
MED17-227	ENST00000640521	UHRF1BP1L	A0JNW5	1464 aa		33.76	■■■□□ 2.99
MED17-227	ENST00000640521	PZP	P20742	1482 aa		33.76	■■■□□ 2.99
MED17-227	ENST00000640521	MBD5	Q9P267	1494 aa		33.75	■■■□□ 2.99
MED17-227	ENST00000640521	FOXD1	Q16676	465 aa		33.75	■■■□□ 2.99
MED17-227	ENST00000640521	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	33.74	■■■□□ 2.99
MED17-227	ENST00000640521	TTC37	Q6PGP7	1564 aa		33.74	■■■□□ 2.99
MED17-227	ENST00000640521	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.72	■■■□□ 2.99
MED17-227	ENST00000640521	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.71	■■■□□ 2.99
MED17-227	ENST00000640521	ANKRD50	Q9ULJ7	1429 aa		33.7	■■■□□ 2.99
MED17-227	ENST00000640521	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.69	■■■□□ 2.98
MED17-227	ENST00000640521	TSPY4	P0CV99	314 aa		33.68	■■■□□ 2.98
MED17-227	ENST00000640521	TSPY10	P0CW01	314 aa		33.68	■■■□□ 2.98
MED17-227	ENST00000640521	RPRD2	Q5VT52	1461 aa	Known RBP	33.68	■■■□□ 2.98
MED17-227	ENST00000640521	YTHDC1	Q96MU7	727 aa	Known RBP	33.66	■■■□□ 2.98
MED17-227	ENST00000640521	CCDC141	Q6ZP82	1450 aa		33.66	■■■□□ 2.98
MED17-227	ENST00000640521	MYO5C	Q9NQX4	1742 aa		33.65	■■■□□ 2.98
MED17-227	ENST00000640521	ARHGAP5	Q13017	1502 aa		33.62	■■■□□ 2.97
MED17-227	ENST00000640521	RSPH4A	Q5TD94	716 aa		33.62	■■■□□ 2.97
MED17-227	ENST00000640521	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.61	■■■□□ 2.97
MED17-227	ENST00000640521	L3MBTL2	Q969R5	705 aa		33.59	■■■□□ 2.97
MED17-227	ENST00000640521	KIAA1107	Q9UPP5	1409 aa		33.58	■■■□□ 2.97
MED17-227	ENST00000640521	SYCP2	Q9BX26	1530 aa		33.57	■■■□□ 2.97
MED17-227	ENST00000640521	KIF15	Q9NS87	1388 aa		33.57	■■■□□ 2.96
MED17-227	ENST00000640521	TEX14	Q8IWB6	1497 aa		33.56	■■■□□ 2.96
MED17-227	ENST00000640521	MAST1	Q9Y2H9	1570 aa		33.55	■■■□□ 2.96
MED17-227	ENST00000640521	KDM5D	Q9BY66	1539 aa		33.55	■■■□□ 2.96
MED17-227	ENST00000640521	DDX10	Q13206	875 aa	Known RBP	33.55	■■■□□ 2.96
MED17-227	ENST00000640521	KCNH8	Q96L42	1107 aa		33.53	■■■□□ 2.96
MED17-227	ENST00000640521	PLEKHH2	Q8IVE3	1493 aa		33.52	■■■□□ 2.96
MED17-227	ENST00000640521	PLCH2	O75038	1416 aa		33.5	■■■□□ 2.95
MED17-227	ENST00000640521	PKD2	Q13563	968 aa		33.49	■■■□□ 2.95
MED17-227	ENST00000640521	NUP155	O75694	1391 aa		33.48	■■■□□ 2.95
MED17-227	ENST00000640521	ARHGEF12	Q9NZN5	1544 aa		33.42	■■■□□ 2.94
MED17-227	ENST00000640521	GTF3C3	Q9Y5Q9	886 aa		33.41	■■■□□ 2.94
MED17-227	ENST00000640521	PLXNC1	O60486	1568 aa		33.41	■■■□□ 2.94
MED17-227	ENST00000640521	HSPA5	P11021	654 aa	Known RBP	33.38	■■■□□ 2.93
MED17-227	ENST00000640521	NBPF8	Q3BBV2	869 aa		33.38	■■■□□ 2.93
MED17-227	ENST00000640521	EFCAB2	Q5VUJ9	269 aa		33.37	■■■□□ 2.93
MED17-227	ENST00000640521	ABCC1	P33527	1531 aa		33.35	■■■□□ 2.93
MED17-227	ENST00000640521	EIF4G2	P78344	907 aa	Known RBP eCLIP	33.35	■■■□□ 2.93
MED17-227	ENST00000640521	ARAP3	Q8WWN8	1544 aa		33.34	■■■□□ 2.93
MED17-227	ENST00000640521	WDR7	Q9Y4E6	1490 aa		33.32	■■■□□ 2.93
MED17-227	ENST00000640521	UNC13B	O14795	1591 aa		33.32	■■■□□ 2.93
MED17-227	ENST00000640521	FAM135A	Q9P2D6	1515 aa		33.31	■■■□□ 2.92
MED17-227	ENST00000640521	OSCAR	Q8IYS5	282 aa		33.27	■■■□□ 2.92
MED17-227	ENST00000640521	DUOX2	Q9NRD8	1548 aa		33.27	■■■□□ 2.92
MED17-227	ENST00000640521	TRAPPC8	Q9Y2L5	1435 aa		33.23	■■■□□ 2.91
MED17-227	ENST00000640521	ABCA9	Q8IUA7	1624 aa		33.22	■■■□□ 2.91
MED17-227	ENST00000640521	WASHC2A	Q641Q2	1341 aa		33.22	■■■□□ 2.91
MED17-227	ENST00000640521	ANP32C	O43423	234 aa		33.19	■■■□□ 2.9
MED17-227	ENST00000640521	IQGAP3	Q86VI3	1631 aa		33.19	■■■□□ 2.9
MED17-227	ENST00000640521	SPATA31E1	Q6ZUB1	1445 aa		33.19	■■■□□ 2.9
MED17-227	ENST00000640521	ERBIN	Q96RT1	1412 aa		33.19	■■■□□ 2.9
MED17-227	ENST00000640521	UHRF1BP1	Q6BDS2	1440 aa		33.16	■■■□□ 2.9
MED17-227	ENST00000640521	MAGI2	Q86UL8	1455 aa		33.16	■■■□□ 2.9
MED17-227	ENST00000640521	CCER2	I3L3R5	266 aa		33.15	■■■□□ 2.9
MED17-227	ENST00000640521	ASXL2	Q76L83	1435 aa		33.15	■■■□□ 2.9
MED17-227	ENST00000640521	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.13	■■■□□ 2.89
MED17-227	ENST00000640521	FANCA	O15360	1455 aa		33.1	■■■□□ 2.89
MED17-227	ENST00000640521	POLR1A	O95602	1720 aa	Predicted RBP	33.1	■■■□□ 2.89
MED17-227	ENST00000640521	ZFYVE16	Q7Z3T8	1539 aa		33.09	■■■□□ 2.89
MED17-227	ENST00000640521	C11orf95	C9JLR9	678 aa	Predicted RBP	33.09	■■■□□ 2.89
MED17-227	ENST00000640521	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.08	■■■□□ 2.89	1e-7	■■■■□ 23.9
MED17-227	ENST00000640521	SPAG9	O60271	1321 aa	Known RBP	33.08	■■■□□ 2.89
MED17-227	ENST00000640521	CCDC7	Q96M83	1385 aa		33.08	■■■□□ 2.89
MED17-227	ENST00000640521	AFAP1	Q8N556	730 aa		33.06	■■■□□ 2.88
MED17-227	ENST00000640521	PLA2R1	Q13018	1463 aa		33.06	■■■□□ 2.88
MED17-227	ENST00000640521	RALGAPB	Q86X10	1494 aa		33.04	■■■□□ 2.88
MED17-227	ENST00000640521	ZNF326	Q5BKZ1	582 aa	Known RBP	33.02	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 252.3 ms