RNA–Protein interactions for RNA: ENST00000639486.1

KCNMA1-261, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 8,850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-261ENST00000639486 GPS2Q13227 327 aa20.78■□□□□ 0.92
KCNMA1-261ENST00000639486 TSHZ2Q9NRE2 1034 aa20.77■□□□□ 0.92
KCNMA1-261ENST00000639486 CLSTN1O94985 981 aa20.77■□□□□ 0.92
KCNMA1-261ENST00000639486 HAP1P54257 671 aaPredicted RBP20.76■□□□□ 0.91
KCNMA1-261ENST00000639486 GSE1Q14687 1217 aa20.74■□□□□ 0.91
KCNMA1-261ENST00000639486 IPO8O15397 1037 aaKnown RBP20.74■□□□□ 0.91
KCNMA1-261ENST00000639486 CC2D1BQ5T0F9 858 aaKnown RBP20.74■□□□□ 0.91
KCNMA1-261ENST00000639486 NPM1P06748 294 aaKnown RBP eCLIP20.73■□□□□ 0.91
KCNMA1-261ENST00000639486 TEX35Q5T0J7 233 aa20.73■□□□□ 0.91
KCNMA1-261ENST00000639486 PPP1R15AO75807 674 aaPredicted RBP20.72■□□□□ 0.91
KCNMA1-261ENST00000639486 RCAN3Q9UKA8 241 aa20.72■□□□□ 0.91
KCNMA1-261ENST00000639486 RWDD1Q9H446 243 aaPredicted RBP20.71■□□□□ 0.91
KCNMA1-261ENST00000639486 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
KCNMA1-261ENST00000639486 PLPPR3Q6T4P5 718 aa20.7■□□□□ 0.9
KCNMA1-261ENST00000639486 PMFBP1Q8TBY8 1022 aa20.7■□□□□ 0.9
KCNMA1-261ENST00000639486 SKOR2Q2VWA4 1001 aaPredicted RBP20.69■□□□□ 0.9
KCNMA1-261ENST00000639486 RGL3Q3MIN7 710 aa20.68■□□□□ 0.9
KCNMA1-261ENST00000639486 NOM1Q5C9Z4 860 aaKnown RBP20.68■□□□□ 0.9
KCNMA1-261ENST00000639486 KTN1Q86UP2 1357 aaKnown RBP20.68■□□□□ 0.9
KCNMA1-261ENST00000639486 TPM3P06753 285 aa20.67■□□□□ 0.9
KCNMA1-261ENST00000639486 CCDC70Q6NSX1 233 aa20.66■□□□□ 0.9
KCNMA1-261ENST00000639486 U2SURPO15042 1029 aaKnown RBP20.64■□□□□ 0.9
KCNMA1-261ENST00000639486 KAT6BQ8WYB5 2073 aa20.64■□□□□ 0.89
KCNMA1-261ENST00000639486 ST18O60284 1047 aa20.64■□□□□ 0.89
KCNMA1-261ENST00000639486 MTERF4Q7Z6M4 381 aaKnown RBP20.64■□□□□ 0.89
KCNMA1-261ENST00000639486 TIMELESSQ9UNS1 1208 aa20.64■□□□□ 0.89
KCNMA1-261ENST00000639486 KIF16BQ96L93 1317 aa20.64■□□□□ 0.89
KCNMA1-261ENST00000639486 TMF1P82094 1093 aa20.63■□□□□ 0.89
KCNMA1-261ENST00000639486 GPATCH3Q96I76 525 aa20.63■□□□□ 0.89
KCNMA1-261ENST00000639486 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.62■□□□□ 0.89
KCNMA1-261ENST00000639486 NPHP1O15259 732 aa20.61■□□□□ 0.89
KCNMA1-261ENST00000639486 MFAP1P55081 439 aaKnown RBP20.59■□□□□ 0.89
KCNMA1-261ENST00000639486 CCNB3Q8WWL7 1395 aa20.59■□□□□ 0.89
KCNMA1-261ENST00000639486 NCBP3Q53F19 620 aaKnown RBP20.59■□□□□ 0.89
KCNMA1-261ENST00000639486 GOLGA6L19H0YKK7 550 aa20.58■□□□□ 0.88
KCNMA1-261ENST00000639486 ITPRIPQ8IWB1 547 aa20.57■□□□□ 0.88
KCNMA1-261ENST00000639486 TSR1Q2NL82 804 aaKnown RBP20.57■□□□□ 0.88
KCNMA1-261ENST00000639486 MAP7D2Q96T17 732 aa20.56■□□□□ 0.88
KCNMA1-261ENST00000639486 ATP6V1DQ9Y5K8 247 aa20.56■□□□□ 0.88
KCNMA1-261ENST00000639486 FHAD1B1AJZ9 1412 aa20.55■□□□□ 0.88
KCNMA1-261ENST00000639486 TNIKQ9UKE5 1360 aa20.55■□□□□ 0.88
KCNMA1-261ENST00000639486 HSP90B1P14625 803 aaKnown RBP20.55■□□□□ 0.88
KCNMA1-261ENST00000639486 KIF3AQ9Y496 699 aa20.55■□□□□ 0.88
KCNMA1-261ENST00000639486 APPP05067 770 aa20.55■□□□□ 0.88
KCNMA1-261ENST00000639486 FANCIQ9NVI1 1328 aa20.54■□□□□ 0.88
KCNMA1-261ENST00000639486 FAM13BQ9NYF5 915 aa20.54■□□□□ 0.88
KCNMA1-261ENST00000639486 PHLDB1Q86UU1 1377 aa20.53■□□□□ 0.88
KCNMA1-261ENST00000639486 RALBP1Q15311 655 aa20.53■□□□□ 0.88
KCNMA1-261ENST00000639486 PLEKHG5O94827 1062 aa20.52■□□□□ 0.88
KCNMA1-261ENST00000639486 CEP89Q96ST8 783 aa20.52■□□□□ 0.87
KCNMA1-261ENST00000639486 TPM1P09493 284 aa20.51■□□□□ 0.87
KCNMA1-261ENST00000639486 CCAR2Q8N163 923 aaKnown RBP20.51■□□□□ 0.87
KCNMA1-261ENST00000639486 POGKQ9P215 609 aa20.51■□□□□ 0.87
KCNMA1-261ENST00000639486 CWC15Q9P013 229 aaKnown RBP20.5■□□□□ 0.87
KCNMA1-261ENST00000639486 SIN3AQ96ST3 1273 aa20.49■□□□□ 0.87
KCNMA1-261ENST00000639486 RB1CC1Q8TDY2 1594 aa20.49■□□□□ 0.87
KCNMA1-261ENST00000639486 FAM43AQ8N2R8 423 aa20.49■□□□□ 0.87
KCNMA1-261ENST00000639486 PKNOX2Q96KN3 472 aa20.49■□□□□ 0.87
KCNMA1-261ENST00000639486 TRIM6-TRIM34B2RNG4 842 aa20.48■□□□□ 0.87
KCNMA1-261ENST00000639486 RRP12Q5JTH9 1297 aaKnown RBP20.48■□□□□ 0.87
KCNMA1-261ENST00000639486 DDX49Q9Y6V7 483 aaKnown RBP20.48■□□□□ 0.87
KCNMA1-261ENST00000639486 RTF1Q92541 710 aaKnown RBP20.48■□□□□ 0.87
KCNMA1-261ENST00000639486 SETD5Q9C0A6 1442 aa20.47■□□□□ 0.87
KCNMA1-261ENST00000639486 APBB1O00213 710 aa20.47■□□□□ 0.87
KCNMA1-261ENST00000639486 ARHGAP35Q9NRY4 1499 aa20.46■□□□□ 0.87
KCNMA1-261ENST00000639486 CFDP1Q9UEE9 299 aaPredicted RBP20.46■□□□□ 0.87
KCNMA1-261ENST00000639486 MORC1Q86VD1 984 aa20.46■□□□□ 0.87
KCNMA1-261ENST00000639486 HMMRO75330 724 aa20.45■□□□□ 0.86
KCNMA1-261ENST00000639486 CCDC66A2RUB6 948 aa20.45■□□□□ 0.86
KCNMA1-261ENST00000639486 FAM161AQ3B820 660 aa20.45■□□□□ 0.86
KCNMA1-261ENST00000639486 CENPQQ7L2Z9 268 aaPredicted RBP20.45■□□□□ 0.86
KCNMA1-261ENST00000639486 SENP3Q9H4L4 574 aaPredicted RBP20.44■□□□□ 0.86
KCNMA1-261ENST00000639486 CREBRFQ8IUR6 639 aa20.44■□□□□ 0.86
KCNMA1-261ENST00000639486 ARGLU1Q9NWB6 273 aaPredicted RBP20.43■□□□□ 0.86
KCNMA1-261ENST00000639486 KIF27Q86VH2 1401 aa20.43■□□□□ 0.86
KCNMA1-261ENST00000639486 BECN2A8MW95 431 aa20.43■□□□□ 0.86
KCNMA1-261ENST00000639486 RASSF8Q8NHQ8 419 aa20.43■□□□□ 0.86
KCNMA1-261ENST00000639486 ZNF592Q92610 1267 aa20.43■□□□□ 0.86
KCNMA1-261ENST00000639486 CHMP4AQ9BY43 222 aa20.43■□□□□ 0.86
KCNMA1-261ENST00000639486 PLEKHD1A6NEE1 506 aa20.42■□□□□ 0.86
KCNMA1-261ENST00000639486 TPD52L1Q16890 204 aaPredicted RBP20.42■□□□□ 0.86
KCNMA1-261ENST00000639486 PATL2C9JE40 543 aaKnown RBP20.42■□□□□ 0.86
KCNMA1-261ENST00000639486 ISY1Q9ULR0 285 aaKnown RBP20.42■□□□□ 0.86
KCNMA1-261ENST00000639486 PRM3Q9NNZ6 103 aa20.42■□□□□ 0.86
KCNMA1-261ENST00000639486 AK7Q96M32 723 aa20.42■□□□□ 0.86
KCNMA1-261ENST00000639486 TPM2P07951 284 aa20.41■□□□□ 0.86
KCNMA1-261ENST00000639486 ACBD3Q9H3P7 528 aa20.41■□□□□ 0.86
KCNMA1-261ENST00000639486 CHMP4CQ96CF2 233 aa20.41■□□□□ 0.86
KCNMA1-261ENST00000639486 DCAF11Q8TEB1 546 aa20.4■□□□□ 0.86
KCNMA1-261ENST00000639486 PDE3BQ13370 1112 aa20.4■□□□□ 0.86
KCNMA1-261ENST00000639486 SF3A1Q15459 793 aaKnown RBP20.4■□□□□ 0.86
KCNMA1-261ENST00000639486 KANK1Q14678 1352 aa20.4■□□□□ 0.86
KCNMA1-261ENST00000639486 HDAC5Q9UQL6 1122 aa20.4■□□□□ 0.86
KCNMA1-261ENST00000639486 H3BQV1 296 aa20.39■□□□□ 0.85
KCNMA1-261ENST00000639486 IFFO2Q5TF58 517 aa20.39■□□□□ 0.85
KCNMA1-261ENST00000639486 ROCK2O75116 1388 aaKnown RBP20.39■□□□□ 0.85
KCNMA1-261ENST00000639486 EIF3AQ14152 1382 aaKnown RBP20.38■□□□□ 0.85
KCNMA1-261ENST00000639486 FOXD4L1Q9NU39 408 aa20.38■□□□□ 0.85
KCNMA1-261ENST00000639486 RUFY1Q96T51 708 aa20.38■□□□□ 0.85
KCNMA1-261ENST00000639486 PES1O00541 588 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms