RNA–Protein interactions for RNA: ENST00000638940.1

SPIN3-216, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,785 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-216ENST00000638940 ABCC10Q5T3U5 1492 aa15.33■□□□□ 0.05
SPIN3-216ENST00000638940 ARID3CA6NKF2 412 aa15.33■□□□□ 0.04
SPIN3-216ENST00000638940 PPP1R15AO75807 674 aaPredicted RBP15.33■□□□□ 0.04
SPIN3-216ENST00000638940 KDM6BO15054 1643 aa15.32■□□□□ 0.04
SPIN3-216ENST00000638940 CDC42BPAQ5VT25 1732 aa15.32■□□□□ 0.04
SPIN3-216ENST00000638940 ADGRL2O95490 1459 aa15.32■□□□□ 0.04
SPIN3-216ENST00000638940 PTPRGP23470 1445 aa15.32■□□□□ 0.04
SPIN3-216ENST00000638940 CENPBP07199 599 aaPredicted RBP15.31■□□□□ 0.04
SPIN3-216ENST00000638940 MIER1Q8N108 512 aa15.3■□□□□ 0.04
SPIN3-216ENST00000638940 RRP7BPQ9NSQ0 103 aa15.3■□□□□ 0.04
SPIN3-216ENST00000638940 PLEKHD1A6NEE1 506 aa15.3■□□□□ 0.04
SPIN3-216ENST00000638940 NEUROD1Q13562 356 aa15.3■□□□□ 0.04
SPIN3-216ENST00000638940 DENND4BO75064 1496 aaPredicted RBP15.29■□□□□ 0.04
SPIN3-216ENST00000638940 CHIC2Q9UKJ5 165 aa15.29■□□□□ 0.04
SPIN3-216ENST00000638940 TONSLQ96HA7 1378 aa15.28■□□□□ 0.04
SPIN3-216ENST00000638940 CFDP1Q9UEE9 299 aaPredicted RBP15.28■□□□□ 0.04
SPIN3-216ENST00000638940 SHANK2Q9UPX8 1470 aa15.28■□□□□ 0.04
SPIN3-216ENST00000638940 CLASP1Q7Z460 1538 aa15.27■□□□□ 0.03
SPIN3-216ENST00000638940 KDM5BQ9UGL1 1544 aa15.25■□□□□ 0.03
SPIN3-216ENST00000638940 ZNF644Q9H582 1327 aaPredicted RBP15.25■□□□□ 0.03
SPIN3-216ENST00000638940 NCOA1Q15788 1441 aa15.25■□□□□ 0.03
SPIN3-216ENST00000638940 ARHGEF5Q12774 1597 aa15.25■□□□□ 0.03
SPIN3-216ENST00000638940 ABCC2Q92887 1545 aa15.23■□□□□ 0.03
SPIN3-216ENST00000638940 MPHOSPH9Q99550 1183 aa15.23■□□□□ 0.03
SPIN3-216ENST00000638940 PREX2Q70Z35 1606 aa15.22■□□□□ 0.03
SPIN3-216ENST00000638940 TRIM52Q96A61 297 aa15.21■□□□□ 0.03
SPIN3-216ENST00000638940 ANKRD30AQ9BXX3 1397 aa15.21■□□□□ 0.02
SPIN3-216ENST00000638940 UHRF1BP1LA0JNW5 1464 aa15.2■□□□□ 0.02
SPIN3-216ENST00000638940 CDC42BPBQ9Y5S2 1711 aa15.19■□□□□ 0.02
SPIN3-216ENST00000638940 ANKRD30BQ9BXX2 1392 aa15.18■□□□□ 0.02
SPIN3-216ENST00000638940 ERCC6L2Q5T890 1561 aa15.17■□□□□ 0.02
SPIN3-216ENST00000638940 PZPP20742 1482 aa15.17■□□□□ 0.02
SPIN3-216ENST00000638940 RPRD2Q5VT52 1461 aaKnown RBP15.17■□□□□ 0.02
SPIN3-216ENST00000638940 RSPH4AQ5TD94 716 aa15.16■□□□□ 0.02
SPIN3-216ENST00000638940 KDM5DQ9BY66 1539 aa15.15■□□□□ 0.02
SPIN3-216ENST00000638940 C9orf84Q5VXU9 1444 aa15.15■□□□□ 0.02
SPIN3-216ENST00000638940 SAMD9LQ8IVG5 1584 aa15.15■□□□□ 0.02
SPIN3-216ENST00000638940 MBD5Q9P267 1494 aa15.15■□□□□ 0.02
SPIN3-216ENST00000638940 MAST1Q9Y2H9 1570 aa15.15■□□□□ 0.02
SPIN3-216ENST00000638940 MYO5CQ9NQX4 1742 aa15.13■□□□□ 0.01
SPIN3-216ENST00000638940 ZNF777Q9ULD5 760 aaPredicted RBP15.13■□□□□ 0.01
SPIN3-216ENST00000638940 ANKRD50Q9ULJ7 1429 aa15.13■□□□□ 0.01
SPIN3-216ENST00000638940 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.13■□□□□ 0.01
SPIN3-216ENST00000638940 CCDC141Q6ZP82 1450 aa15.12■□□□□ 0.01
SPIN3-216ENST00000638940 PLEKHH2Q8IVE3 1493 aa15.12■□□□□ 0.01
SPIN3-216ENST00000638940 ZCCHC11Q5TAX3 1644 aaKnown RBP15.11■□□□□ 0.01
SPIN3-216ENST00000638940 TTC37Q6PGP7 1564 aa15.11■□□□□ 0.01
SPIN3-216ENST00000638940 TEX14Q8IWB6 1497 aa15.1■□□□□ 0.01
SPIN3-216ENST00000638940 KIAA1107Q9UPP5 1409 aa15.1■□□□□ 0.01
SPIN3-216ENST00000638940 SLC4A1APQ9BWU0 796 aaKnown RBP15.1■□□□□ 0.01
SPIN3-216ENST00000638940 TSPY4P0CV99 314 aa15.09■□□□□ 0.01
SPIN3-216ENST00000638940 TSPY10P0CW01 314 aa15.09■□□□□ 0.01
SPIN3-216ENST00000638940 YTHDC1Q96MU7 727 aaKnown RBP15.07■□□□□ 0
SPIN3-216ENST00000638940 PLXNC1O60486 1568 aa15.06■□□□□ 0
SPIN3-216ENST00000638940 ARHGAP5Q13017 1502 aa15.06■□□□□ 0
SPIN3-216ENST00000638940 ARAP3Q8WWN8 1544 aa15.06■□□□□ 0
SPIN3-216ENST00000638940 L3MBTL2Q969R5 705 aa15.05■□□□□ 0
SPIN3-216ENST00000638940 KIF15Q9NS87 1388 aa15.05■□□□□ -0
SPIN3-216ENST00000638940 GTF3C3Q9Y5Q9 886 aa15.05■□□□□ -0
SPIN3-216ENST00000638940 SYCP2Q9BX26 1530 aa15.04■□□□□ -0
SPIN3-216ENST00000638940 PLCH2O75038 1416 aa15.04■□□□□ -0
SPIN3-216ENST00000638940 HNRNPMP52272 730 aaKnown RBP eCLIP15.03■□□□□ -0
SPIN3-216ENST00000638940 DDX10Q13206 875 aaKnown RBP15.03■□□□□ -0
SPIN3-216ENST00000638940 UNC13BO14795 1591 aa15.02■□□□□ -0
SPIN3-216ENST00000638940 FOXD1Q16676 465 aa15.02□□□□□ -0.01
SPIN3-216ENST00000638940 POLR1AO95602 1720 aaPredicted RBP15□□□□□ -0.01
SPIN3-216ENST00000638940 CCER2I3L3R5 266 aa15□□□□□ -0.01
SPIN3-216ENST00000638940 NUP155O75694 1391 aa15□□□□□ -0.01
SPIN3-216ENST00000638940 ARHGEF12Q9NZN5 1544 aa14.99□□□□□ -0.01
SPIN3-216ENST00000638940 EIF4G2P78344 907 aaKnown RBP eCLIP14.99□□□□□ -0.01
SPIN3-216ENST00000638940 PKD2Q13563 968 aa14.99□□□□□ -0.01
SPIN3-216ENST00000638940 ABCC1P33527 1531 aa14.99□□□□□ -0.01
SPIN3-216ENST00000638940 HSPA5P11021 654 aaKnown RBP14.97□□□□□ -0.01
SPIN3-216ENST00000638940 DUOX2Q9NRD8 1548 aa14.97□□□□□ -0.01
SPIN3-216ENST00000638940 FAM135AQ9P2D6 1515 aa14.97□□□□□ -0.01
SPIN3-216ENST00000638940 UHRF1BP1Q6BDS2 1440 aa14.96□□□□□ -0.01
SPIN3-216ENST00000638940 IQGAP3Q86VI3 1631 aa14.96□□□□□ -0.02
SPIN3-216ENST00000638940 SPATA31E1Q6ZUB1 1445 aa14.96□□□□□ -0.02
SPIN3-216ENST00000638940 EFCAB2Q5VUJ9 269 aa14.96□□□□□ -0.02
SPIN3-216ENST00000638940 ERBINQ96RT1 1412 aa14.95□□□□□ -0.02
SPIN3-216ENST00000638940 MAGI2Q86UL8 1455 aa14.95□□□□□ -0.02
SPIN3-216ENST00000638940 NBPF8Q3BBV2 869 aa14.95□□□□□ -0.02
SPIN3-216ENST00000638940 HIRIP3Q9BW71 556 aaPredicted RBP14.95□□□□□ -0.02
SPIN3-216ENST00000638940 ANP32CO43423 234 aa14.94□□□□□ -0.02
SPIN3-216ENST00000638940 WDR7Q9Y4E6 1490 aa14.94□□□□□ -0.02
SPIN3-216ENST00000638940 ABCA9Q8IUA7 1624 aa14.94□□□□□ -0.02
SPIN3-216ENST00000638940 RTEL1-TNFRSF6BF6WH68 1400 aa14.93□□□□□ -0.02
SPIN3-216ENST00000638940 WASHC2AQ641Q2 1341 aa14.91□□□□□ -0.02
SPIN3-216ENST00000638940 KCNH8Q96L42 1107 aa14.9□□□□□ -0.02
SPIN3-216ENST00000638940 RALGAPBQ86X10 1494 aa14.9□□□□□ -0.02
SPIN3-216ENST00000638940 ATP10AO60312 1499 aa14.89□□□□□ -0.03
SPIN3-216ENST00000638940 CCDC7Q96M83 1385 aa14.89□□□□□ -0.03
SPIN3-216ENST00000638940 CNTLNQ9NXG0 1405 aa14.88□□□□□ -0.03
SPIN3-216ENST00000638940 KDM5CP41229 1560 aa14.87□□□□□ -0.03
SPIN3-216ENST00000638940 PRKCSHP14314 528 aaPredicted RBP14.87□□□□□ -0.03
SPIN3-216ENST00000638940 TRAPPC8Q9Y2L5 1435 aa14.86□□□□□ -0.03
SPIN3-216ENST00000638940 ZFYVE16Q7Z3T8 1539 aa14.86□□□□□ -0.03
SPIN3-216ENST00000638940 ARID4BQ4LE39 1312 aaPredicted RBP14.86□□□□□ -0.03
SPIN3-216ENST00000638940 INO80Q9ULG1 1556 aaPredicted RBP14.85□□□□□ -0.03
SPIN3-216ENST00000638940 DEPDC5O75140 1603 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 247.2 ms