RNA–Protein interactions for RNA: ENST00000638751.1

KCNMA1-243, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

TSL 5

Gene KCNMA1, Length 4,939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-243	ENST00000638751	NOM1	Q5C9Z4	860 aa	Known RBP	10.41	□□□□□ -0.74
KCNMA1-243	ENST00000638751	NFKBIB	Q15653	356 aa		10.41	□□□□□ -0.74
KCNMA1-243	ENST00000638751	TEX35	Q5T0J7	233 aa		10.4	□□□□□ -0.75
KCNMA1-243	ENST00000638751	PDCL3	Q9H2J4	239 aa		10.4	□□□□□ -0.75
KCNMA1-243	ENST00000638751	IRX3	P78415	501 aa	Predicted RBP	10.39	□□□□□ -0.75
KCNMA1-243	ENST00000638751	CCER2	I3L3R5	266 aa		10.39	□□□□□ -0.75
KCNMA1-243	ENST00000638751		E9PSI1	815 aa		10.39	□□□□□ -0.75
KCNMA1-243	ENST00000638751	HTATSF1	O43719	755 aa	Known RBP	10.39	□□□□□ -0.75
KCNMA1-243	ENST00000638751	CHMP4A	Q9BY43	222 aa		10.39	□□□□□ -0.75
KCNMA1-243	ENST00000638751	CLIP1	P30622	1438 aa		10.39	□□□□□ -0.75
KCNMA1-243	ENST00000638751	CEP162	Q5TB80	1403 aa		10.38	□□□□□ -0.75
KCNMA1-243	ENST00000638751	PAK3	O75914	559 aa	Predicted RBP	10.38	□□□□□ -0.75
KCNMA1-243	ENST00000638751	GPS2	Q13227	327 aa		10.38	□□□□□ -0.75
KCNMA1-243	ENST00000638751	PRDM10	Q9NQV6	1147 aa		10.37	□□□□□ -0.75
KCNMA1-243	ENST00000638751	CALD1	Q05682	793 aa	Known RBP	10.37	□□□□□ -0.75
KCNMA1-243	ENST00000638751	CC2D1B	Q5T0F9	858 aa	Known RBP	10.37	□□□□□ -0.75
KCNMA1-243	ENST00000638751	CHMP4B	Q9H444	224 aa	Known RBP	10.37	□□□□□ -0.75
KCNMA1-243	ENST00000638751	KIF27	Q86VH2	1401 aa		10.36	□□□□□ -0.75
KCNMA1-243	ENST00000638751	DDX11L8	A8MPP1	907 aa		10.36	□□□□□ -0.75
KCNMA1-243	ENST00000638751	PDE4A	P27815	886 aa		10.36	□□□□□ -0.75
KCNMA1-243	ENST00000638751	SMARCA4	P51532	1647 aa		10.35	□□□□□ -0.75
KCNMA1-243	ENST00000638751	MSH5	O43196	834 aa		10.35	□□□□□ -0.75
KCNMA1-243	ENST00000638751	KIAA1211	Q6ZU35	1233 aa		10.35	□□□□□ -0.75
KCNMA1-243	ENST00000638751	CGN	Q9P2M7	1197 aa	Known RBP	10.35	□□□□□ -0.75
KCNMA1-243	ENST00000638751	CCDC88B	A6NC98	1476 aa		10.35	□□□□□ -0.75
KCNMA1-243	ENST00000638751	FGD1	P98174	961 aa		10.34	□□□□□ -0.75
KCNMA1-243	ENST00000638751	HOMEZ	Q8IX15	550 aa		10.34	□□□□□ -0.75
KCNMA1-243	ENST00000638751	ZNF526	Q8TF50	670 aa	Predicted RBP	10.33	□□□□□ -0.76
KCNMA1-243	ENST00000638751	MRE11	P49959	708 aa		10.33	□□□□□ -0.76
KCNMA1-243	ENST00000638751	CWC15	Q9P013	229 aa	Known RBP	10.33	□□□□□ -0.76
KCNMA1-243	ENST00000638751	SYAP1	Q96A49	352 aa	Predicted RBP	10.32	□□□□□ -0.76
KCNMA1-243	ENST00000638751	NOC3L	Q8WTT2	800 aa	Known RBP	10.32	□□□□□ -0.76
KCNMA1-243	ENST00000638751	GOLGA6L4	A6NEF3	574 aa		10.31	□□□□□ -0.76
KCNMA1-243	ENST00000638751	BRD2	P25440	801 aa	Known RBP	10.31	□□□□□ -0.76
KCNMA1-243	ENST00000638751	WIZ	O95785	1651 aa		10.31	□□□□□ -0.76
KCNMA1-243	ENST00000638751	DEF6	Q9H4E7	631 aa		10.3	□□□□□ -0.76
KCNMA1-243	ENST00000638751	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.3	□□□□□ -0.76
KCNMA1-243	ENST00000638751	TSPYL1	Q9H0U9	437 aa		10.3	□□□□□ -0.76
KCNMA1-243	ENST00000638751	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.29	□□□□□ -0.76
KCNMA1-243	ENST00000638751	DDX49	Q9Y6V7	483 aa	Known RBP	10.29	□□□□□ -0.76
KCNMA1-243	ENST00000638751	ESPN	B1AK53	854 aa		10.29	□□□□□ -0.76
KCNMA1-243	ENST00000638751	CASC1	Q6TDU7	716 aa		10.29	□□□□□ -0.76
KCNMA1-243	ENST00000638751	TULP1	O00294	542 aa	Predicted RBP	10.28	□□□□□ -0.76
KCNMA1-243	ENST00000638751	RDX	P35241	583 aa	Known RBP	10.28	□□□□□ -0.76
KCNMA1-243	ENST00000638751	WWC1	Q8IX03	1113 aa		10.28	□□□□□ -0.76
KCNMA1-243	ENST00000638751	UQCRHL	A0A096LP55	91 aa		10.27	□□□□□ -0.77
KCNMA1-243	ENST00000638751	UQCRH	P07919	91 aa		10.27	□□□□□ -0.77
KCNMA1-243	ENST00000638751	HSP90AB3P	Q58FF7	597 aa		10.27	□□□□□ -0.77
KCNMA1-243	ENST00000638751	GPATCH11	Q8N954	259 aa		10.27	□□□□□ -0.77
KCNMA1-243	ENST00000638751	DIAPH3	Q9NSV4	1193 aa		10.27	□□□□□ -0.77
KCNMA1-243	ENST00000638751	HMGN5	P82970	282 aa	Known RBP	10.26	□□□□□ -0.77
KCNMA1-243	ENST00000638751	RBM25	P49756	843 aa	Known RBP	10.26	□□□□□ -0.77
KCNMA1-243	ENST00000638751	FRAT2	O75474	233 aa	Predicted RBP	10.25	□□□□□ -0.77
KCNMA1-243	ENST00000638751	ZNF592	Q92610	1267 aa		10.25	□□□□□ -0.77
KCNMA1-243	ENST00000638751	TNNT1	P13805	278 aa		10.24	□□□□□ -0.77
KCNMA1-243	ENST00000638751	KCNJ4	P48050	445 aa		10.24	□□□□□ -0.77
KCNMA1-243	ENST00000638751	CBX1	P83916	185 aa		10.24	□□□□□ -0.77
KCNMA1-243	ENST00000638751	ERICH4	A6NGS2	130 aa		10.23	□□□□□ -0.77
KCNMA1-243	ENST00000638751	STK11IP	Q8N1F8	1099 aa		10.23	□□□□□ -0.77
KCNMA1-243	ENST00000638751		H0YHG0	523 aa		10.23	□□□□□ -0.77
KCNMA1-243	ENST00000638751	VGLL3	A8MV65	326 aa		10.23	□□□□□ -0.77
KCNMA1-243	ENST00000638751	DHX37	Q8IY37	1157 aa	Known RBP	10.23	□□□□□ -0.77
KCNMA1-243	ENST00000638751	DNAJC2	Q99543	621 aa	Known RBP	10.23	□□□□□ -0.77
KCNMA1-243	ENST00000638751	AAMP	Q13685	434 aa		10.22	□□□□□ -0.77
KCNMA1-243	ENST00000638751	CCDC9	Q9Y3X0	531 aa	Known RBP	10.22	□□□□□ -0.77
KCNMA1-243	ENST00000638751	ATAD2B	Q9ULI0	1458 aa		10.22	□□□□□ -0.77
KCNMA1-243	ENST00000638751	NASP	P49321	788 aa	Predicted RBP	10.22	□□□□□ -0.77
KCNMA1-243	ENST00000638751	FTSJ3	Q8IY81	847 aa	Known RBP	10.22	□□□□□ -0.77
KCNMA1-243	ENST00000638751	KCNH8	Q96L42	1107 aa		10.22	□□□□□ -0.77
KCNMA1-243	ENST00000638751	PHF14	O94880	888 aa		10.22	□□□□□ -0.77
KCNMA1-243	ENST00000638751	KLHL34	Q8N239	644 aa		10.22	□□□□□ -0.77
KCNMA1-243	ENST00000638751	CALCOCO1	Q9P1Z2	691 aa		10.21	□□□□□ -0.77
KCNMA1-243	ENST00000638751	FHAD1	B1AJZ9	1412 aa		10.21	□□□□□ -0.77
KCNMA1-243	ENST00000638751	MS4A1	P11836	297 aa		10.21	□□□□□ -0.77
KCNMA1-243	ENST00000638751	FAM161A	Q3B820	660 aa		10.21	□□□□□ -0.77
KCNMA1-243	ENST00000638751	TRERF1	Q96PN7	1200 aa		10.21	□□□□□ -0.77
KCNMA1-243	ENST00000638751	GNL2	Q13823	731 aa	Known RBP	10.21	□□□□□ -0.78
KCNMA1-243	ENST00000638751	MEX3C	Q5U5Q3	659 aa	Known RBP	10.21	□□□□□ -0.78
KCNMA1-243	ENST00000638751	RCAN3	Q9UKA8	241 aa		10.2	□□□□□ -0.78
KCNMA1-243	ENST00000638751	KIF3A	Q9Y496	699 aa		10.2	□□□□□ -0.78
KCNMA1-243	ENST00000638751	CLGN	O14967	610 aa		10.2	□□□□□ -0.78
KCNMA1-243	ENST00000638751	FOXD4L1	Q9NU39	408 aa		10.2	□□□□□ -0.78
KCNMA1-243	ENST00000638751	CCAR2	Q8N163	923 aa	Known RBP	10.2	□□□□□ -0.78
KCNMA1-243	ENST00000638751	IPO4	Q8TEX9	1081 aa	Known RBP	10.2	□□□□□ -0.78
KCNMA1-243	ENST00000638751	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.2	□□□□□ -0.78
KCNMA1-243	ENST00000638751	VPS8	Q8N3P4	1428 aa		10.19	□□□□□ -0.78
KCNMA1-243	ENST00000638751	MFAP1	P55081	439 aa	Known RBP	10.19	□□□□□ -0.78
KCNMA1-243	ENST00000638751	HSP90B1	P14625	803 aa	Known RBP	10.19	□□□□□ -0.78
KCNMA1-243	ENST00000638751	USP8	P40818	1118 aa		10.19	□□□□□ -0.78
KCNMA1-243	ENST00000638751	SIN3A	Q96ST3	1273 aa		10.19	□□□□□ -0.78
KCNMA1-243	ENST00000638751	CCDC39	Q9UFE4	941 aa		10.18	□□□□□ -0.78
KCNMA1-243	ENST00000638751	SSR1	P43307	286 aa	Known RBP	10.18	□□□□□ -0.78
KCNMA1-243	ENST00000638751	CHMP5	Q9NZZ3	219 aa		10.18	□□□□□ -0.78
KCNMA1-243	ENST00000638751	NEFH	P12036	1026 aa		10.18	□□□□□ -0.78
KCNMA1-243	ENST00000638751	GTF2A1	P52655	376 aa	Predicted RBP	10.18	□□□□□ -0.78
KCNMA1-243	ENST00000638751	CCDC173	Q0VFZ6	552 aa		10.18	□□□□□ -0.78
KCNMA1-243	ENST00000638751	LEKR1	Q6ZMV7	388 aa		10.18	□□□□□ -0.78
KCNMA1-243	ENST00000638751	NUDC	Q9Y266	331 aa		10.18	□□□□□ -0.78
KCNMA1-243	ENST00000638751	FAM193A	P78312	1265 aa		10.17	□□□□□ -0.78
KCNMA1-243	ENST00000638751	SOGA1	O94964	1423 aa		10.17	□□□□□ -0.78

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