RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 PPP4R2Q9NY27 417 aa15.03■□□□□ -0
SNIP1-204ENST00000638725 NBPF8Q3BBV2 869 aa15.03■□□□□ -0
SNIP1-204ENST00000638725 ERICH6BQ5W0A0 696 aa15.03■□□□□ -0
SNIP1-204ENST00000638725 MIA2Q96PC5 1412 aa15.03■□□□□ -0
SNIP1-204ENST00000638725 RPRD2Q5VT52 1461 aaKnown RBP14.99□□□□□ -0.01
SNIP1-204ENST00000638725 ANKRD30BQ9BXX2 1392 aa14.99□□□□□ -0.01
SNIP1-204ENST00000638725 ZBED9Q6R2W3 1325 aa14.99□□□□□ -0.01
SNIP1-204ENST00000638725 TEX14Q8IWB6 1497 aa14.99□□□□□ -0.01
SNIP1-204ENST00000638725 IQGAP2Q13576 1575 aa14.99□□□□□ -0.01
SNIP1-204ENST00000638725 B4GALNT3Q6L9W6 998 aa14.98□□□□□ -0.01
SNIP1-204ENST00000638725 KIF7Q2M1P5 1343 aa14.98□□□□□ -0.01
SNIP1-204ENST00000638725 TARBP1Q13395 1621 aaKnown RBP14.98□□□□□ -0.01
SNIP1-204ENST00000638725 ERICH6Q7L0X2 663 aa14.98□□□□□ -0.01
SNIP1-204ENST00000638725 WDR62O43379 1518 aa14.98□□□□□ -0.01
SNIP1-204ENST00000638725 PDS5BQ9NTI5 1447 aa14.97□□□□□ -0.01
SNIP1-204ENST00000638725 DAPK1P53355 1430 aa14.97□□□□□ -0.01
SNIP1-204ENST00000638725 SPATA31E1Q6ZUB1 1445 aa14.96□□□□□ -0.02
SNIP1-204ENST00000638725 PBRM1Q86U86 1689 aa14.94□□□□□ -0.02
SNIP1-204ENST00000638725 ROCK1Q13464 1354 aa14.94□□□□□ -0.02
SNIP1-204ENST00000638725 ABCC5O15440 1437 aa14.94□□□□□ -0.02
SNIP1-204ENST00000638725 SLC4A1APQ9BWU0 796 aaKnown RBP14.94□□□□□ -0.02
SNIP1-204ENST00000638725 ZNF644Q9H582 1327 aaPredicted RBP14.93□□□□□ -0.02
SNIP1-204ENST00000638725 DNMT1P26358 1616 aaKnown RBP14.92□□□□□ -0.02
SNIP1-204ENST00000638725 POLR1AO95602 1720 aaPredicted RBP14.92□□□□□ -0.02
SNIP1-204ENST00000638725 ADAMTS12P58397 1594 aa14.91□□□□□ -0.02
SNIP1-204ENST00000638725 DNAJC5BQ9UF47 199 aa14.91□□□□□ -0.02
SNIP1-204ENST00000638725 CNGB1Q14028 1251 aaPredicted RBP14.91□□□□□ -0.02
SNIP1-204ENST00000638725 DHX29Q7Z478 1369 aaKnown RBP14.87□□□□□ -0.03
SNIP1-204ENST00000638725 POLR3GLQ9BT43 218 aa14.87□□□□□ -0.03
SNIP1-204ENST00000638725 PZPP20742 1482 aa14.87□□□□□ -0.03
SNIP1-204ENST00000638725 SMG6Q86US8 1419 aaKnown RBP14.85□□□□□ -0.03
SNIP1-204ENST00000638725 NUP153P49790 1475 aaKnown RBP14.85□□□□□ -0.03
SNIP1-204ENST00000638725 ZNF326Q5BKZ1 582 aaKnown RBP14.85□□□□□ -0.03
SNIP1-204ENST00000638725 BCORL1Q5H9F3 1711 aa14.84□□□□□ -0.03
SNIP1-204ENST00000638725 USP47Q96K76 1375 aa14.83□□□□□ -0.03
SNIP1-204ENST00000638725 MBD5Q9P267 1494 aa14.83□□□□□ -0.03
SNIP1-204ENST00000638725 SENP3-EIF4A1A0A087X0R7 540 aa14.83□□□□□ -0.04
SNIP1-204ENST00000638725 KIAA0556O60303 1618 aa14.83□□□□□ -0.04
SNIP1-204ENST00000638725 NUDCQ9Y266 331 aa14.83□□□□□ -0.04
SNIP1-204ENST00000638725 DISP1Q96F81 1524 aa14.82□□□□□ -0.04
SNIP1-204ENST00000638725 RAPGEF6Q8TEU7 1601 aa14.81□□□□□ -0.04
SNIP1-204ENST00000638725 CAMSAP2Q08AD1 1489 aa14.8□□□□□ -0.04
SNIP1-204ENST00000638725 KIAA1107Q9UPP5 1409 aa14.8□□□□□ -0.04
SNIP1-204ENST00000638725 PRG4Q92954 1404 aaPredicted RBP14.79□□□□□ -0.04
SNIP1-204ENST00000638725 CFDP1Q9UEE9 299 aaPredicted RBP14.79□□□□□ -0.04
SNIP1-204ENST00000638725 RNF123Q5XPI4 1314 aa14.78□□□□□ -0.04
SNIP1-204ENST00000638725 PKD2Q13563 968 aa14.78□□□□□ -0.04
SNIP1-204ENST00000638725 KIF14Q15058 1648 aa14.78□□□□□ -0.04
SNIP1-204ENST00000638725 KIAA0586Q9BVV6 1533 aa14.78□□□□□ -0.04
SNIP1-204ENST00000638725 KDM5CP41229 1560 aa14.78□□□□□ -0.04
SNIP1-204ENST00000638725 CCDC136Q96JN2 1154 aa14.77□□□□□ -0.04
SNIP1-204ENST00000638725 ZNF777Q9ULD5 760 aaPredicted RBP14.77□□□□□ -0.04
SNIP1-204ENST00000638725 NOP58Q9Y2X3 529 aaKnown RBP14.77□□□□□ -0.04
SNIP1-204ENST00000638725 ZNF608Q9ULD9 1512 aaPredicted RBP14.77□□□□□ -0.05
SNIP1-204ENST00000638725 ADGBQ8N7X0 1667 aa14.77□□□□□ -0.05
SNIP1-204ENST00000638725 TROQ12816 1431 aaPredicted RBP14.76□□□□□ -0.05
SNIP1-204ENST00000638725 PAK3O75914 559 aaPredicted RBP14.76□□□□□ -0.05
SNIP1-204ENST00000638725 PNISRQ8TF01 805 aaKnown RBP14.75□□□□□ -0.05
SNIP1-204ENST00000638725 GPATCH8Q9UKJ3 1502 aaKnown RBP14.74□□□□□ -0.05
SNIP1-204ENST00000638725 ADGRL2O95490 1459 aa14.74□□□□□ -0.05
SNIP1-204ENST00000638725 MRC2Q9UBG0 1479 aa14.74□□□□□ -0.05
SNIP1-204ENST00000638725 ARID4BQ4LE39 1312 aaPredicted RBP14.74□□□□□ -0.05
SNIP1-204ENST00000638725 TMC1Q8TDI8 760 aa14.73□□□□□ -0.05
SNIP1-204ENST00000638725 MYT1LQ9UL68 1186 aa14.73□□□□□ -0.05
SNIP1-204ENST00000638725 ITSN2Q9NZM3 1697 aa14.73□□□□□ -0.05
SNIP1-204ENST00000638725 DEKP35659 375 aaKnown RBP14.73□□□□□ -0.05
SNIP1-204ENST00000638725 CROCC2H7BZ55 1655 aa14.72□□□□□ -0.05
SNIP1-204ENST00000638725 ANKRD30AQ9BXX3 1397 aa14.72□□□□□ -0.05
SNIP1-204ENST00000638725 NBR1Q14596 966 aa14.71□□□□□ -0.05
SNIP1-204ENST00000638725 CARD11Q9BXL7 1154 aa14.71□□□□□ -0.05
SNIP1-204ENST00000638725 RALGAPBQ86X10 1494 aa14.71□□□□□ -0.05
SNIP1-204ENST00000638725 ANKRD50Q9ULJ7 1429 aa14.71□□□□□ -0.05
SNIP1-204ENST00000638725 ROCK2O75116 1388 aaKnown RBP14.71□□□□□ -0.06
SNIP1-204ENST00000638725 PLB1Q6P1J6 1458 aa14.71□□□□□ -0.06
SNIP1-204ENST00000638725 UHRF1BP1Q6BDS2 1440 aa14.7□□□□□ -0.06
SNIP1-204ENST00000638725 GRIN2AQ12879 1464 aa14.69□□□□□ -0.06
SNIP1-204ENST00000638725 KIF15Q9NS87 1388 aa14.69□□□□□ -0.06
SNIP1-204ENST00000638725 IFT140Q96RY7 1462 aa14.69□□□□□ -0.06
SNIP1-204ENST00000638725 NUP155O75694 1391 aa14.68□□□□□ -0.06
SNIP1-204ENST00000638725 ST20-MTHFSA0A0A6YYL1 179 aa14.68□□□□□ -0.06
SNIP1-204ENST00000638725 ANP32AP39687 249 aaKnown RBP14.68□□□□□ -0.06
SNIP1-204ENST00000638725 KDM2AQ9Y2K7 1162 aa14.68□□□□□ -0.06
SNIP1-204ENST00000638725 LRPPRCP42704 1394 aaKnown RBP14.67□□□□□ -0.06
SNIP1-204ENST00000638725 ADCY10Q96PN6 1610 aa14.67□□□□□ -0.06
SNIP1-204ENST00000638725 IPO9Q96P70 1041 aaKnown RBP14.66□□□□□ -0.06
SNIP1-204ENST00000638725 MYBBP1AQ9BQG0 1328 aaKnown RBP14.66□□□□□ -0.06
SNIP1-204ENST00000638725 BRD4O60885 1362 aaPredicted RBP14.65□□□□□ -0.06
SNIP1-204ENST00000638725 ARHGEF12Q9NZN5 1544 aa14.65□□□□□ -0.06
SNIP1-204ENST00000638725 RRP1P56182 461 aaKnown RBP14.63□□□□□ -0.07
SNIP1-204ENST00000638725 DCAF11Q8TEB1 546 aa14.63□□□□□ -0.07
SNIP1-204ENST00000638725 C9orf84Q5VXU9 1444 aa14.63□□□□□ -0.07
SNIP1-204ENST00000638725 EIF4G3O43432 1585 aaKnown RBP14.62□□□□□ -0.07
SNIP1-204ENST00000638725 RALBP1Q15311 655 aa14.62□□□□□ -0.07
SNIP1-204ENST00000638725 EXOC6Q8TAG9 804 aa14.62□□□□□ -0.07
SNIP1-204ENST00000638725 SALL2Q9Y467 1007 aaPredicted RBP14.62□□□□□ -0.07
SNIP1-204ENST00000638725 CDC42BPAQ5VT25 1732 aa14.62□□□□□ -0.07
SNIP1-204ENST00000638725 ZBTB47Q9UFB7 747 aaPredicted RBP14.62□□□□□ -0.07
SNIP1-204ENST00000638725 E9PCH4 1651 aa14.61□□□□□ -0.07
SNIP1-204ENST00000638725 CEP170Q5SW79 1584 aa14.61□□□□□ -0.07
SNIP1-204ENST00000638725 KTN1Q86UP2 1357 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms