RNA–Protein interactions for RNA: ENST00000636476.1

OBSCN-213, Transcript of obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, humanhuman

TSL 1 (best)

Gene OBSCN, Length 7,835 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OBSCN-213ENST00000636476 GOLGA6L6A8MZA4 724 aa17.13■□□□□ 0.33
OBSCN-213ENST00000636476 TNIKQ9UKE5 1360 aa17.13■□□□□ 0.33
OBSCN-213ENST00000636476 STK26Q9P289 416 aa17.13■□□□□ 0.33
OBSCN-213ENST00000636476 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
OBSCN-213ENST00000636476 PPP4R2Q9NY27 417 aa17.12■□□□□ 0.33
OBSCN-213ENST00000636476 MORC1Q86VD1 984 aa17.1■□□□□ 0.33
OBSCN-213ENST00000636476 GOLGA6L4A6NEF3 574 aa17.1■□□□□ 0.33
OBSCN-213ENST00000636476 PAK3O75914 559 aaPredicted RBP17.1■□□□□ 0.33
OBSCN-213ENST00000636476 B4GALNT3Q6L9W6 998 aa17.1■□□□□ 0.33
OBSCN-213ENST00000636476 GGT6Q6P531 493 aa17.08■□□□□ 0.32
OBSCN-213ENST00000636476 CUX2O14529 1486 aa17.07■□□□□ 0.32
OBSCN-213ENST00000636476 NAP1L5Q96NT1 182 aaPredicted RBP17.07■□□□□ 0.32
OBSCN-213ENST00000636476 HSCBQ8IWL3 235 aa17.07■□□□□ 0.32
OBSCN-213ENST00000636476 MCCP23508 829 aa17.06■□□□□ 0.32
OBSCN-213ENST00000636476 G3V3G9 751 aa17.06■□□□□ 0.32
OBSCN-213ENST00000636476 DCAF8Q5TAQ9 597 aa17.06■□□□□ 0.32
OBSCN-213ENST00000636476 NRDCO43847 1150 aa17.05■□□□□ 0.32
OBSCN-213ENST00000636476 ERICH6BQ5W0A0 696 aa17.05■□□□□ 0.32
OBSCN-213ENST00000636476 WWC1Q8IX03 1113 aa17.05■□□□□ 0.32
OBSCN-213ENST00000636476 SPRYD3Q8NCJ5 442 aa17.04■□□□□ 0.32
OBSCN-213ENST00000636476 ARHGAP35Q9NRY4 1499 aa17.04■□□□□ 0.32
OBSCN-213ENST00000636476 MSH5O43196 834 aa17.04■□□□□ 0.32
OBSCN-213ENST00000636476 NOP58Q9Y2X3 529 aaKnown RBP17.04■□□□□ 0.32
OBSCN-213ENST00000636476 CARMIL1Q5VZK9 1371 aa17.03■□□□□ 0.32
OBSCN-213ENST00000636476 TMX4Q9H1E5 349 aaPredicted RBP17.03■□□□□ 0.32
OBSCN-213ENST00000636476 APBB1O00213 710 aa17.02■□□□□ 0.32
OBSCN-213ENST00000636476 GNL2Q13823 731 aaKnown RBP17.02■□□□□ 0.32
OBSCN-213ENST00000636476 HDGFL2Q7Z4V5 671 aaPredicted RBP17.01■□□□□ 0.31
OBSCN-213ENST00000636476 RTN4Q9NQC3 1192 aaKnown RBP17.01■□□□□ 0.31
OBSCN-213ENST00000636476 FOXD1Q16676 465 aa17■□□□□ 0.31
OBSCN-213ENST00000636476 DRC7Q8IY82 874 aa17■□□□□ 0.31
OBSCN-213ENST00000636476 KIAA1211Q6ZU35 1233 aa16.99■□□□□ 0.31
OBSCN-213ENST00000636476 ROCK2O75116 1388 aaKnown RBP16.98■□□□□ 0.31
OBSCN-213ENST00000636476 ABCC8Q09428 1581 aa16.97■□□□□ 0.31
OBSCN-213ENST00000636476 CSB-PGBD3P0DP91 1061 aa16.97■□□□□ 0.31
OBSCN-213ENST00000636476 CHAF1AQ13111 956 aaPredicted RBP16.96■□□□□ 0.31
OBSCN-213ENST00000636476 KTN1Q86UP2 1357 aaKnown RBP16.96■□□□□ 0.31
OBSCN-213ENST00000636476 PKD2Q13563 968 aa16.95■□□□□ 0.3
OBSCN-213ENST00000636476 SETD5Q9C0A6 1442 aa16.95■□□□□ 0.3
OBSCN-213ENST00000636476 IPO8O15397 1037 aaKnown RBP16.95■□□□□ 0.3
OBSCN-213ENST00000636476 CFAP44Q96MT7 982 aa16.94■□□□□ 0.3
OBSCN-213ENST00000636476 CARMIL2Q6F5E8 1435 aa16.93■□□□□ 0.3
OBSCN-213ENST00000636476 U2AF1L5P0DN76 240 aaPredicted RBP16.93■□□□□ 0.3
OBSCN-213ENST00000636476 U2AF1Q01081 240 aaKnown RBP eCLIP16.93■□□□□ 0.3
OBSCN-213ENST00000636476 MSNP26038 577 aaKnown RBP16.92■□□□□ 0.3
OBSCN-213ENST00000636476 CALD1Q05682 793 aaKnown RBP16.92■□□□□ 0.3
OBSCN-213ENST00000636476 CHMP3Q9Y3E7 222 aa16.91■□□□□ 0.3
OBSCN-213ENST00000636476 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
OBSCN-213ENST00000636476 ITPRIPQ8IWB1 547 aa16.9■□□□□ 0.3
OBSCN-213ENST00000636476 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
OBSCN-213ENST00000636476 SOGA1O94964 1423 aa16.9■□□□□ 0.3
OBSCN-213ENST00000636476 VPS53Q5VIR6 699 aa16.89■□□□□ 0.29
OBSCN-213ENST00000636476 KAT6BQ8WYB5 2073 aa16.89■□□□□ 0.29
OBSCN-213ENST00000636476 SPAG9O60271 1321 aaKnown RBP16.89■□□□□ 0.29
OBSCN-213ENST00000636476 GORABQ5T7V8 394 aa16.87■□□□□ 0.29
OBSCN-213ENST00000636476 TAF7LQ5H9L4 462 aa16.87■□□□□ 0.29
OBSCN-213ENST00000636476 WIZO95785 1651 aa16.87■□□□□ 0.29
OBSCN-213ENST00000636476 NUP155O75694 1391 aa16.86■□□□□ 0.29
OBSCN-213ENST00000636476 MEX3CQ5U5Q3 659 aaKnown RBP16.86■□□□□ 0.29
OBSCN-213ENST00000636476 KIAA2012Q0VF49 1180 aa16.85■□□□□ 0.29
OBSCN-213ENST00000636476 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
OBSCN-213ENST00000636476 PRDM2Q13029 1718 aa16.85■□□□□ 0.29
OBSCN-213ENST00000636476 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
OBSCN-213ENST00000636476 EIF3AQ14152 1382 aaKnown RBP16.84■□□□□ 0.29
OBSCN-213ENST00000636476 GPATCH3Q96I76 525 aa16.84■□□□□ 0.29
OBSCN-213ENST00000636476 RCAN3Q9UKA8 241 aa16.84■□□□□ 0.29
OBSCN-213ENST00000636476 TRIM6-TRIM34B2RNG4 842 aa16.83■□□□□ 0.29
OBSCN-213ENST00000636476 MPHOSPH9Q99550 1183 aa16.83■□□□□ 0.28
OBSCN-213ENST00000636476 L1TD1Q5T7N2 865 aaKnown RBP16.82■□□□□ 0.28
OBSCN-213ENST00000636476 STK31Q9BXU1 1019 aa16.82■□□□□ 0.28
OBSCN-213ENST00000636476 RAD21O60216 631 aa16.82■□□□□ 0.28
OBSCN-213ENST00000636476 EID1Q9Y6B2 187 aa16.82■□□□□ 0.28
OBSCN-213ENST00000636476 CCER2I3L3R5 266 aa16.81■□□□□ 0.28
OBSCN-213ENST00000636476 TIMELESSQ9UNS1 1208 aa16.81■□□□□ 0.28
OBSCN-213ENST00000636476 NUTM2DQ5VT03 806 aaPredicted RBP16.81■□□□□ 0.28
OBSCN-213ENST00000636476 CREBRFQ8IUR6 639 aa16.81■□□□□ 0.28
OBSCN-213ENST00000636476 EFCAB2Q5VUJ9 269 aa16.8■□□□□ 0.28
OBSCN-213ENST00000636476 NGDNQ8NEJ9 315 aaKnown RBP16.8■□□□□ 0.28
OBSCN-213ENST00000636476 RWDD1Q9H446 243 aaPredicted RBP16.8■□□□□ 0.28
OBSCN-213ENST00000636476 PDS5BQ9NTI5 1447 aa16.8■□□□□ 0.28
OBSCN-213ENST00000636476 KIF3BO15066 747 aa16.8■□□□□ 0.28
OBSCN-213ENST00000636476 SLC4A10Q6U841 1118 aa16.8■□□□□ 0.28
OBSCN-213ENST00000636476 FMN1Q68DA7 1419 aa16.8■□□□□ 0.28
OBSCN-213ENST00000636476 SMC4Q9NTJ3 1288 aa16.8■□□□□ 0.28
OBSCN-213ENST00000636476 ANKRD30AQ9BXX3 1397 aa16.79■□□□□ 0.28
OBSCN-213ENST00000636476 NOC3LQ8WTT2 800 aaKnown RBP16.79■□□□□ 0.28
OBSCN-213ENST00000636476 RALBP1Q15311 655 aa16.79■□□□□ 0.28
OBSCN-213ENST00000636476 VPS8Q8N3P4 1428 aa16.79■□□□□ 0.28
OBSCN-213ENST00000636476 GZF1Q9H116 711 aaPredicted RBP16.79■□□□□ 0.28
OBSCN-213ENST00000636476 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
OBSCN-213ENST00000636476 GBP4Q96PP9 640 aa16.79■□□□□ 0.28
OBSCN-213ENST00000636476 TERF2IPQ9NYB0 399 aa16.79■□□□□ 0.28
OBSCN-213ENST00000636476 CHMP4AQ9BY43 222 aa16.78■□□□□ 0.28
OBSCN-213ENST00000636476 HNRNPMP52272 730 aaKnown RBP eCLIP16.78■□□□□ 0.28
OBSCN-213ENST00000636476 NUTM2FA1L443 756 aa16.77■□□□□ 0.28
OBSCN-213ENST00000636476 HSP90B1P14625 803 aaKnown RBP16.77■□□□□ 0.28
OBSCN-213ENST00000636476 DCAF8L1A6NGE4 600 aa16.77■□□□□ 0.28
OBSCN-213ENST00000636476 AMPHP49418 695 aa16.77■□□□□ 0.28
OBSCN-213ENST00000636476 LTV1Q96GA3 475 aaPredicted RBP16.77■□□□□ 0.27
OBSCN-213ENST00000636476 SAMD1Q6SPF0 538 aaPredicted RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms