RNA–Protein interactions for RNA: ENST00000636157.1

SMARCA2-247, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 3,211 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-247ENST00000636157 PDE4AP27815 886 aa9.83□□□□□ -0.84
SMARCA2-247ENST00000636157 L1TD1Q5T7N2 865 aaKnown RBP9.82□□□□□ -0.84
SMARCA2-247ENST00000636157 HOMEZQ8IX15 550 aa9.82□□□□□ -0.84
SMARCA2-247ENST00000636157 IPO4Q8TEX9 1081 aaKnown RBP9.82□□□□□ -0.84
SMARCA2-247ENST00000636157 FRAT2O75474 233 aaPredicted RBP9.82□□□□□ -0.84
SMARCA2-247ENST00000636157 MAP3K1Q13233 1512 aa9.81□□□□□ -0.84
SMARCA2-247ENST00000636157 TCERG1O14776 1098 aaKnown RBP9.81□□□□□ -0.84
SMARCA2-247ENST00000636157 RSPH4AQ5TD94 716 aa9.81□□□□□ -0.84
SMARCA2-247ENST00000636157 STAC3Q96MF2 364 aa9.81□□□□□ -0.84
SMARCA2-247ENST00000636157 ZBED9Q6R2W3 1325 aa9.81□□□□□ -0.84
SMARCA2-247ENST00000636157 KIF21AQ7Z4S6 1674 aa9.8□□□□□ -0.84
SMARCA2-247ENST00000636157 PDS5BQ9NTI5 1447 aa9.8□□□□□ -0.84
SMARCA2-247ENST00000636157 TPM2P07951 284 aa9.8□□□□□ -0.84
SMARCA2-247ENST00000636157 NCLP19338 710 aaKnown RBP9.8□□□□□ -0.84
SMARCA2-247ENST00000636157 FHAD1B1AJZ9 1412 aa9.79□□□□□ -0.84
SMARCA2-247ENST00000636157 BACH2Q9BYV9 841 aa9.79□□□□□ -0.84
SMARCA2-247ENST00000636157 SLC4A3P48751 1232 aa9.78□□□□□ -0.84
SMARCA2-247ENST00000636157 CADPSQ9ULU8 1353 aa9.77□□□□□ -0.84
SMARCA2-247ENST00000636157 ZHX1Q9UKY1 873 aaPredicted RBP9.77□□□□□ -0.85
SMARCA2-247ENST00000636157 TOP2BQ02880 1626 aa9.77□□□□□ -0.85
SMARCA2-247ENST00000636157 TIAM1Q13009 1591 aa9.77□□□□□ -0.85
SMARCA2-247ENST00000636157 NCOA2Q15596 1464 aa9.77□□□□□ -0.85
SMARCA2-247ENST00000636157 C14orf37Q86TY3 774 aa9.77□□□□□ -0.85
SMARCA2-247ENST00000636157 TONSLQ96HA7 1378 aa9.76□□□□□ -0.85
SMARCA2-247ENST00000636157 RNF123Q5XPI4 1314 aa9.76□□□□□ -0.85
SMARCA2-247ENST00000636157 ARHGAP35Q9NRY4 1499 aa9.76□□□□□ -0.85
SMARCA2-247ENST00000636157 BRD2P25440 801 aaKnown RBP9.76□□□□□ -0.85
SMARCA2-247ENST00000636157 MRC2Q9UBG0 1479 aa9.76□□□□□ -0.85
SMARCA2-247ENST00000636157 SMG6Q86US8 1419 aaKnown RBP9.75□□□□□ -0.85
SMARCA2-247ENST00000636157 POGKQ9P215 609 aa9.75□□□□□ -0.85
SMARCA2-247ENST00000636157 MS4A1P11836 297 aa9.74□□□□□ -0.85
SMARCA2-247ENST00000636157 SAMD1Q6SPF0 538 aaPredicted RBP9.74□□□□□ -0.85
SMARCA2-247ENST00000636157 CNTLNQ9NXG0 1405 aa9.74□□□□□ -0.85
SMARCA2-247ENST00000636157 SMAP1Q8IYB5 467 aaPredicted RBP9.74□□□□□ -0.85
SMARCA2-247ENST00000636157 FAM9BQ8IZU0 186 aa9.73□□□□□ -0.85
SMARCA2-247ENST00000636157 BIVM-ERCC5R4GMW8 1640 aa9.72□□□□□ -0.85
SMARCA2-247ENST00000636157 KDM5BQ9UGL1 1544 aa9.72□□□□□ -0.85
SMARCA2-247ENST00000636157 LRRC9Q6ZRR7 1453 aa9.72□□□□□ -0.85
SMARCA2-247ENST00000636157 PHLDB1Q86UU1 1377 aa9.72□□□□□ -0.85
SMARCA2-247ENST00000636157 CCDC184Q52MB2 194 aa9.72□□□□□ -0.85
SMARCA2-247ENST00000636157 PLCD3Q8N3E9 789 aa9.71□□□□□ -0.85
SMARCA2-247ENST00000636157 MAP7D2Q96T17 732 aa9.71□□□□□ -0.85
SMARCA2-247ENST00000636157 AKNAQ7Z591 1439 aa9.71□□□□□ -0.86
SMARCA2-247ENST00000636157 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMARCA2-247ENST00000636157 ESPNB1AK53 854 aa9.69□□□□□ -0.86
SMARCA2-247ENST00000636157 XRCC6P12956 609 aaKnown RBP eCLIP9.69□□□□□ -0.86
SMARCA2-247ENST00000636157 PRKRIP1Q9H875 184 aaPredicted RBP9.69□□□□□ -0.86
SMARCA2-247ENST00000636157 FTSJ3Q8IY81 847 aaKnown RBP9.69□□□□□ -0.86
SMARCA2-247ENST00000636157 GOLGA6L3A6NEY3 463 aa9.69□□□□□ -0.86
SMARCA2-247ENST00000636157 ZFP91Q96JP5 570 aaPredicted RBP9.69□□□□□ -0.86
SMARCA2-247ENST00000636157 TNNT2P45379 298 aaPredicted RBP9.68□□□□□ -0.86
SMARCA2-247ENST00000636157 FOXD1Q16676 465 aa9.68□□□□□ -0.86
SMARCA2-247ENST00000636157 KIAA1211Q6ZU35 1233 aa9.68□□□□□ -0.86
SMARCA2-247ENST00000636157 MRS2Q9HD23 443 aa9.68□□□□□ -0.86
SMARCA2-247ENST00000636157 NUDCQ9Y266 331 aa9.68□□□□□ -0.86
SMARCA2-247ENST00000636157 UACAQ9BZF9 1416 aa9.67□□□□□ -0.86
SMARCA2-247ENST00000636157 VGLL3A8MV65 326 aa9.67□□□□□ -0.86
SMARCA2-247ENST00000636157 PRDM10Q9NQV6 1147 aa9.67□□□□□ -0.86
SMARCA2-247ENST00000636157 FAM13BQ9NYF5 915 aa9.67□□□□□ -0.86
SMARCA2-247ENST00000636157 CFAP43Q8NDM7 1665 aa9.67□□□□□ -0.86
SMARCA2-247ENST00000636157 DNMBPQ6XZF7 1577 aa9.67□□□□□ -0.86
SMARCA2-247ENST00000636157 FAM50AQ14320 339 aaKnown RBP9.67□□□□□ -0.86
SMARCA2-247ENST00000636157 ANP32BQ92688 251 aaKnown RBP9.66□□□□□ -0.86
SMARCA2-247ENST00000636157 ZNF830Q96NB3 372 aaPredicted RBP9.66□□□□□ -0.86
SMARCA2-247ENST00000636157 PANK2Q9BZ23 570 aa9.66□□□□□ -0.86
SMARCA2-247ENST00000636157 HSPA5P11021 654 aaKnown RBP9.66□□□□□ -0.86
SMARCA2-247ENST00000636157 TMEM51Q9NW97 253 aa9.66□□□□□ -0.86
SMARCA2-247ENST00000636157 PPP4R3BQ5MIZ7 849 aa9.65□□□□□ -0.86
SMARCA2-247ENST00000636157 UTP14CQ5TAP6 766 aaKnown RBP9.65□□□□□ -0.86
SMARCA2-247ENST00000636157 CCDC18Q5T9S5 1454 aa9.65□□□□□ -0.87
SMARCA2-247ENST00000636157 NCOA1Q15788 1441 aa9.65□□□□□ -0.87
SMARCA2-247ENST00000636157 TRIM44Q96DX7 344 aaPredicted RBP9.64□□□□□ -0.87
SMARCA2-247ENST00000636157 ARID3AQ99856 593 aa9.64□□□□□ -0.87
SMARCA2-247ENST00000636157 DMTNQ08495 405 aa9.63□□□□□ -0.87
SMARCA2-247ENST00000636157 MYH16Q9H6N6 1097 aa9.63□□□□□ -0.87
SMARCA2-247ENST00000636157 KIF27Q86VH2 1401 aa9.63□□□□□ -0.87
SMARCA2-247ENST00000636157 CCDC7Q96M83 1385 aa9.63□□□□□ -0.87
SMARCA2-247ENST00000636157 ABCA5Q8WWZ7 1642 aa9.63□□□□□ -0.87
SMARCA2-247ENST00000636157 EIF4G2P78344 907 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMARCA2-247ENST00000636157 HFM1A2PYH4 1435 aa9.63□□□□□ -0.87
SMARCA2-247ENST00000636157 TEX2Q8IWB9 1127 aa9.62□□□□□ -0.87
SMARCA2-247ENST00000636157 ERBB4Q15303 1308 aa9.62□□□□□ -0.87
SMARCA2-247ENST00000636157 FANCD2Q9BXW9 1451 aa9.62□□□□□ -0.87
SMARCA2-247ENST00000636157 CDK11BP21127 795 aaKnown RBP9.61□□□□□ -0.87
SMARCA2-247ENST00000636157 RIPK4P57078 832 aa9.61□□□□□ -0.87
SMARCA2-247ENST00000636157 MTERF4Q7Z6M4 381 aaKnown RBP9.61□□□□□ -0.87
SMARCA2-247ENST00000636157 SECISBP2LQ93073 1101 aaKnown RBP9.61□□□□□ -0.87
SMARCA2-247ENST00000636157 ERCC6Q03468 1493 aa9.61□□□□□ -0.87
SMARCA2-247ENST00000636157 PTPN23Q9H3S7 1636 aa9.6□□□□□ -0.87
SMARCA2-247ENST00000636157 FSD2A1L4K1 749 aa9.6□□□□□ -0.87
SMARCA2-247ENST00000636157 TARBP1Q13395 1621 aaKnown RBP9.6□□□□□ -0.87
SMARCA2-247ENST00000636157 EXOC6Q8TAG9 804 aa9.6□□□□□ -0.87
SMARCA2-247ENST00000636157 IFT140Q96RY7 1462 aa9.59□□□□□ -0.87
SMARCA2-247ENST00000636157 MRE11P49959 708 aa9.59□□□□□ -0.87
SMARCA2-247ENST00000636157 AMER1Q5JTC6 1135 aaPredicted RBP9.59□□□□□ -0.87
SMARCA2-247ENST00000636157 KIF20AO95235 890 aa9.59□□□□□ -0.87
SMARCA2-247ENST00000636157 GZF1Q9H116 711 aaPredicted RBP9.59□□□□□ -0.87
SMARCA2-247ENST00000636157 NESP48681 1621 aa9.59□□□□□ -0.88
SMARCA2-247ENST00000636157 POLR1AO95602 1720 aaPredicted RBP9.58□□□□□ -0.88
SMARCA2-247ENST00000636157 TERF1P54274 439 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms