RNA–Protein interactions for RNA: ENST00000635914.1

UBE3A-224, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 9,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-224ENST00000635914 TNNT3P45378 269 aaPredicted RBP17.43■□□□□ 0.38
UBE3A-224ENST00000635914 KCNH8Q96L42 1107 aa17.42■□□□□ 0.38
UBE3A-224ENST00000635914 NACADO15069 1562 aa17.42■□□□□ 0.38
UBE3A-224ENST00000635914 KIF27Q86VH2 1401 aa17.41■□□□□ 0.38
UBE3A-224ENST00000635914 BAZ1BQ9UIG0 1483 aaKnown RBP17.41■□□□□ 0.38
UBE3A-224ENST00000635914 RRP7BPQ9NSQ0 103 aa17.41■□□□□ 0.38
UBE3A-224ENST00000635914 KIF3AQ9Y496 699 aa17.4■□□□□ 0.38
UBE3A-224ENST00000635914 PPP4R2Q9NY27 417 aa17.4■□□□□ 0.38
UBE3A-224ENST00000635914 RGS3P49796 1198 aa17.4■□□□□ 0.38
UBE3A-224ENST00000635914 CEP164Q9UPV0 1460 aa17.39■□□□□ 0.37
UBE3A-224ENST00000635914 CHMP4CQ96CF2 233 aa17.38■□□□□ 0.37
UBE3A-224ENST00000635914 SPAG9O60271 1321 aaKnown RBP17.38■□□□□ 0.37
UBE3A-224ENST00000635914 U2SURPO15042 1029 aaKnown RBP17.38■□□□□ 0.37
UBE3A-224ENST00000635914 TMF1P82094 1093 aa17.38■□□□□ 0.37
UBE3A-224ENST00000635914 RGL3Q3MIN7 710 aa17.37■□□□□ 0.37
UBE3A-224ENST00000635914 TPM3P06753 285 aa17.36■□□□□ 0.37
UBE3A-224ENST00000635914 CCDC70Q6NSX1 233 aa17.36■□□□□ 0.37
UBE3A-224ENST00000635914 NEUROD2Q15784 382 aa17.35■□□□□ 0.37
UBE3A-224ENST00000635914 EIF4G1Q04637 1599 aaKnown RBP17.34■□□□□ 0.37
UBE3A-224ENST00000635914 RASSF8Q8NHQ8 419 aa17.34■□□□□ 0.37
UBE3A-224ENST00000635914 G3V3G9 751 aa17.33■□□□□ 0.37
UBE3A-224ENST00000635914 DCAF8Q5TAQ9 597 aa17.33■□□□□ 0.37
UBE3A-224ENST00000635914 TSR1Q2NL82 804 aaKnown RBP17.33■□□□□ 0.37
UBE3A-224ENST00000635914 GORABQ5T7V8 394 aa17.32■□□□□ 0.36
UBE3A-224ENST00000635914 ANO8Q9HCE9 1232 aaPredicted RBP17.32■□□□□ 0.36
UBE3A-224ENST00000635914 CCNB3Q8WWL7 1395 aa17.32■□□□□ 0.36
UBE3A-224ENST00000635914 TPM2P07951 284 aa17.31■□□□□ 0.36
UBE3A-224ENST00000635914 CEP162Q5TB80 1403 aa17.3■□□□□ 0.36
UBE3A-224ENST00000635914 TCEAL9Q9UHQ7 104 aa17.3■□□□□ 0.36
UBE3A-224ENST00000635914 KTN1Q86UP2 1357 aaKnown RBP17.29■□□□□ 0.36
UBE3A-224ENST00000635914 SRPK2P78362 688 aaKnown RBP17.29■□□□□ 0.36
UBE3A-224ENST00000635914 HDGFL2Q7Z4V5 671 aaPredicted RBP17.29■□□□□ 0.36
UBE3A-224ENST00000635914 HMMRO75330 724 aa17.28■□□□□ 0.36
UBE3A-224ENST00000635914 HSP90B1P14625 803 aaKnown RBP17.27■□□□□ 0.36
UBE3A-224ENST00000635914 TPM1P09493 284 aa17.27■□□□□ 0.36
UBE3A-224ENST00000635914 TAF7LQ5H9L4 462 aa17.27■□□□□ 0.35
UBE3A-224ENST00000635914 ARHGAP35Q9NRY4 1499 aa17.25■□□□□ 0.35
UBE3A-224ENST00000635914 MORC1Q86VD1 984 aa17.25■□□□□ 0.35
UBE3A-224ENST00000635914 SUPT16HQ9Y5B9 1047 aaKnown RBP17.25■□□□□ 0.35
UBE3A-224ENST00000635914 LRRFIP1Q32MZ4 808 aaKnown RBP17.25■□□□□ 0.35
UBE3A-224ENST00000635914 GPS2Q13227 327 aa17.25■□□□□ 0.35
UBE3A-224ENST00000635914 CALRP27797 417 aaKnown RBP17.24■□□□□ 0.35
UBE3A-224ENST00000635914 STK31Q9BXU1 1019 aa17.23■□□□□ 0.35
UBE3A-224ENST00000635914 MIER1Q8N108 512 aa17.23■□□□□ 0.35
UBE3A-224ENST00000635914 VPS53Q5VIR6 699 aa17.22■□□□□ 0.35
UBE3A-224ENST00000635914 KIF16BQ96L93 1317 aa17.22■□□□□ 0.35
UBE3A-224ENST00000635914 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
UBE3A-224ENST00000635914 CC2D1BQ5T0F9 858 aaKnown RBP17.22■□□□□ 0.35
UBE3A-224ENST00000635914 RWDD1Q9H446 243 aaPredicted RBP17.22■□□□□ 0.35
UBE3A-224ENST00000635914 BAZ1AQ9NRL2 1556 aaPredicted RBP17.21■□□□□ 0.35
UBE3A-224ENST00000635914 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
UBE3A-224ENST00000635914 AMOTL1Q8IY63 956 aa17.2■□□□□ 0.34
UBE3A-224ENST00000635914 ATP6V1DQ9Y5K8 247 aa17.19■□□□□ 0.34
UBE3A-224ENST00000635914 TCERG1O14776 1098 aaKnown RBP17.19■□□□□ 0.34
UBE3A-224ENST00000635914 MARCH6O60337 910 aa17.19■□□□□ 0.34
UBE3A-224ENST00000635914 PHLDB1Q86UU1 1377 aa17.19■□□□□ 0.34
UBE3A-224ENST00000635914 LMOD3Q0VAK6 560 aa17.19■□□□□ 0.34
UBE3A-224ENST00000635914 TPD52L1Q16890 204 aaPredicted RBP17.18■□□□□ 0.34
UBE3A-224ENST00000635914 ST18O60284 1047 aa17.18■□□□□ 0.34
UBE3A-224ENST00000635914 CHMP3Q9Y3E7 222 aa17.18■□□□□ 0.34
UBE3A-224ENST00000635914 PMFBP1Q8TBY8 1022 aa17.18■□□□□ 0.34
UBE3A-224ENST00000635914 CSB-PGBD3P0DP91 1061 aa17.17■□□□□ 0.34
UBE3A-224ENST00000635914 WRNQ14191 1432 aaPredicted RBP eCLIP17.16■□□□□ 0.345e-6■■■■■ 29.2
UBE3A-224ENST00000635914 HOOK1Q9UJC3 728 aaKnown RBP17.16■□□□□ 0.34
UBE3A-224ENST00000635914 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
UBE3A-224ENST00000635914 RRP12Q5JTH9 1297 aaKnown RBP17.15■□□□□ 0.34
UBE3A-224ENST00000635914 HIRIP3Q9BW71 556 aaPredicted RBP17.15■□□□□ 0.34
UBE3A-224ENST00000635914 TRIM34Q9BYJ4 488 aa17.15■□□□□ 0.34
UBE3A-224ENST00000635914 ANKRD20A12PQ8NF67 263 aa17.14■□□□□ 0.33
UBE3A-224ENST00000635914 IPO7O95373 1038 aaKnown RBP17.14■□□□□ 0.33
UBE3A-224ENST00000635914 ITPRIPQ8IWB1 547 aa17.14■□□□□ 0.33
UBE3A-224ENST00000635914 ROCK2O75116 1388 aaKnown RBP17.14■□□□□ 0.33
UBE3A-224ENST00000635914 TRIM6-TRIM34B2RNG4 842 aa17.14■□□□□ 0.33
UBE3A-224ENST00000635914 AKAP17AQ02040 695 aaKnown RBP17.13■□□□□ 0.33
UBE3A-224ENST00000635914 NOL10Q9BSC4 688 aaKnown RBP17.13■□□□□ 0.33
UBE3A-224ENST00000635914 RDXP35241 583 aaKnown RBP17.13■□□□□ 0.33
UBE3A-224ENST00000635914 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
UBE3A-224ENST00000635914 AMER1Q5JTC6 1135 aaPredicted RBP17.12■□□□□ 0.33
UBE3A-224ENST00000635914 CARMIL2Q6F5E8 1435 aa17.12■□□□□ 0.33
UBE3A-224ENST00000635914 ZNF330Q9Y3S2 320 aaPredicted RBP17.11■□□□□ 0.33
UBE3A-224ENST00000635914 FRAT2O75474 233 aaPredicted RBP17.11■□□□□ 0.33
UBE3A-224ENST00000635914 DDX11L8A8MPP1 907 aa17.1■□□□□ 0.33
UBE3A-224ENST00000635914 RTN4Q9NQC3 1192 aaKnown RBP17.1■□□□□ 0.33
UBE3A-224ENST00000635914 TERF2IPQ9NYB0 399 aa17.1■□□□□ 0.33
UBE3A-224ENST00000635914 CREBRFQ8IUR6 639 aa17.1■□□□□ 0.33
UBE3A-224ENST00000635914 RALBP1Q15311 655 aa17.1■□□□□ 0.33
UBE3A-224ENST00000635914 CTDP1Q9Y5B0 961 aaPredicted RBP17.1■□□□□ 0.33
UBE3A-224ENST00000635914 PES1O00541 588 aaKnown RBP17.09■□□□□ 0.33
UBE3A-224ENST00000635914 GOLGA6L19H0YKK7 550 aa17.09■□□□□ 0.33
UBE3A-224ENST00000635914 SF3A1Q15459 793 aaKnown RBP17.09■□□□□ 0.33
UBE3A-224ENST00000635914 PDE4CQ08493 712 aa17.09■□□□□ 0.33
UBE3A-224ENST00000635914 GOLGA6L3A6NEY3 463 aa17.09■□□□□ 0.33
UBE3A-224ENST00000635914 H3BQV1 296 aa17.09■□□□□ 0.33
UBE3A-224ENST00000635914 IFFO2Q5TF58 517 aa17.09■□□□□ 0.33
UBE3A-224ENST00000635914 CDR1P51861 262 aa17.09■□□□□ 0.33
UBE3A-224ENST00000635914 DCAF11Q8TEB1 546 aa17.08■□□□□ 0.33
UBE3A-224ENST00000635914 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.33
UBE3A-224ENST00000635914 UACAQ9BZF9 1416 aa17.08■□□□□ 0.32
UBE3A-224ENST00000635914 GTF2E1P29083 439 aaPredicted RBP17.08■□□□□ 0.32
UBE3A-224ENST00000635914 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms