RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 STK25O00506 426 aa7.12□□□□□ -1.27
PSPC1-208ENST00000635562 AMER1Q5JTC6 1135 aaPredicted RBP7.12□□□□□ -1.27
PSPC1-208ENST00000635562 RTN4Q9NQC3 1192 aaKnown RBP7.11□□□□□ -1.27
PSPC1-208ENST00000635562 FBXO22Q8NEZ5 403 aa7.1□□□□□ -1.27
PSPC1-208ENST00000635562 KRTAP3-3Q9BYR6 98 aa7.1□□□□□ -1.27
PSPC1-208ENST00000635562 KRTAP3-2Q9BYR7 98 aa7.1□□□□□ -1.27
PSPC1-208ENST00000635562 TMEM92Q6UXU6 159 aa7.09□□□□□ -1.27
PSPC1-208ENST00000635562 POTEB3A0JP26 581 aa7.08□□□□□ -1.28
PSPC1-208ENST00000635562 POTEBQ6S5H4 581 aa7.08□□□□□ -1.28
PSPC1-208ENST00000635562 MFRPQ9BY79 579 aa7.08□□□□□ -1.28
PSPC1-208ENST00000635562 VARS2Q5ST30 1063 aaKnown RBP7.06□□□□□ -1.28
PSPC1-208ENST00000635562 GPR153Q6NV75 609 aa7.06□□□□□ -1.28
PSPC1-208ENST00000635562 PKD2Q13563 968 aa7.05□□□□□ -1.28
PSPC1-208ENST00000635562 PTGER2P43116 358 aa7.04□□□□□ -1.28
PSPC1-208ENST00000635562 ZNF687Q8N1G0 1237 aa7.04□□□□□ -1.28
PSPC1-208ENST00000635562 RGL2O15211 777 aa7.03□□□□□ -1.28
PSPC1-208ENST00000635562 KIF3CO14782 793 aa7.01□□□□□ -1.29
PSPC1-208ENST00000635562 SLC34A2O95436 690 aa7.01□□□□□ -1.29
PSPC1-208ENST00000635562 TMC2Q8TDI7 906 aa7.01□□□□□ -1.29
PSPC1-208ENST00000635562 C2orf72A6NCS6 295 aa6.99□□□□□ -1.29
PSPC1-208ENST00000635562 ARSIQ5FYB1 569 aa6.99□□□□□ -1.29
PSPC1-208ENST00000635562 ZNF316A6NFI3 1004 aaPredicted RBP6.98□□□□□ -1.29
PSPC1-208ENST00000635562 PBX2P40425 430 aa6.98□□□□□ -1.29
PSPC1-208ENST00000635562 HS6ST3Q8IZP7 471 aa6.97□□□□□ -1.29
PSPC1-208ENST00000635562 RNF166Q96A37 237 aaPredicted RBP6.97□□□□□ -1.29
PSPC1-208ENST00000635562 RYDENQ9NUL5 291 aaKnown RBP6.97□□□□□ -1.29
PSPC1-208ENST00000635562 MYT1LQ9UL68 1186 aa6.97□□□□□ -1.29
PSPC1-208ENST00000635562 PSDA5PKW4 1024 aaPredicted RBP6.96□□□□□ -1.3
PSPC1-208ENST00000635562 PCDHGA4Q9Y5G9 962 aa6.94□□□□□ -1.3
PSPC1-208ENST00000635562 NUDT7P0C024 238 aa6.92□□□□□ -1.3
PSPC1-208ENST00000635562 LSM11P83369 360 aaKnown RBP eCLIP6.92□□□□□ -1.3
PSPC1-208ENST00000635562 FOXK1P85037 733 aa6.91□□□□□ -1.3
PSPC1-208ENST00000635562 DNAJC5Q9H3Z4 198 aa6.91□□□□□ -1.3
PSPC1-208ENST00000635562 ANKRD13DQ6ZTN6 518 aa6.9□□□□□ -1.3
PSPC1-208ENST00000635562 PTCD2Q8WV60 388 aaKnown RBP6.9□□□□□ -1.3
PSPC1-208ENST00000635562 KHSRPQ92945 711 aaKnown RBP eCLIP6.9□□□□□ -1.37e-7■■■□□ 16.1
PSPC1-208ENST00000635562 TBC1D12O60347 775 aa6.89□□□□□ -1.31
PSPC1-208ENST00000635562 PPP1R37O75864 691 aa6.89□□□□□ -1.31
PSPC1-208ENST00000635562 GPHNQ9NQX3 736 aaPredicted RBP6.89□□□□□ -1.31
PSPC1-208ENST00000635562 LHX6Q9UPM6 363 aa6.89□□□□□ -1.31
PSPC1-208ENST00000635562 CHGAP10645 457 aaKnown RBP6.88□□□□□ -1.31
PSPC1-208ENST00000635562 ARHGAP33O14559 1287 aa6.85□□□□□ -1.31
PSPC1-208ENST00000635562 PLPP6Q8IY26 295 aa6.85□□□□□ -1.31
PSPC1-208ENST00000635562 KCNH8Q96L42 1107 aa6.85□□□□□ -1.31
PSPC1-208ENST00000635562 KDM4FA0A1W2PPD8 638 aa6.83□□□□□ -1.32
PSPC1-208ENST00000635562 TK2O00142 265 aa6.83□□□□□ -1.32
PSPC1-208ENST00000635562 PPP4R3BQ5MIZ7 849 aa6.83□□□□□ -1.32
PSPC1-208ENST00000635562 DSG2Q14126 1118 aa6.82□□□□□ -1.32
PSPC1-208ENST00000635562 ADGRD1Q6QNK2 874 aa6.81□□□□□ -1.32
PSPC1-208ENST00000635562 POTEEQ6S8J3 1075 aa6.79□□□□□ -1.32
PSPC1-208ENST00000635562 CRISPLD2Q9H0B8 497 aa6.79□□□□□ -1.32
PSPC1-208ENST00000635562 HCSTQ9UBK5 93 aa6.79□□□□□ -1.32
PSPC1-208ENST00000635562 AXIN2Q9Y2T1 843 aa6.79□□□□□ -1.32
PSPC1-208ENST00000635562 PDE4AP27815 886 aa6.78□□□□□ -1.32
PSPC1-208ENST00000635562 NKX1-1Q15270 411 aaPredicted RBP6.78□□□□□ -1.32
PSPC1-208ENST00000635562 PPP1R15BQ5SWA1 713 aa6.77□□□□□ -1.33
PSPC1-208ENST00000635562 OXER1Q8TDS5 423 aa6.77□□□□□ -1.33
PSPC1-208ENST00000635562 STAC3Q96MF2 364 aa6.76□□□□□ -1.33
PSPC1-208ENST00000635562 HRO43593 1189 aa6.74□□□□□ -1.33
PSPC1-208ENST00000635562 SLC24A1O60721 1099 aa6.74□□□□□ -1.33
PSPC1-208ENST00000635562 PSEN2P49810 448 aa6.73□□□□□ -1.33
PSPC1-208ENST00000635562 KCNK17Q96T54 332 aa6.73□□□□□ -1.33
PSPC1-208ENST00000635562 SLC4A5Q9BY07 1137 aa6.73□□□□□ -1.33
PSPC1-208ENST00000635562 BCL2L12Q9HB09 334 aa6.73□□□□□ -1.33
PSPC1-208ENST00000635562 DMRTA1Q5VZB9 504 aa6.72□□□□□ -1.33
PSPC1-208ENST00000635562 ZNF454Q8N9F8 522 aa6.72□□□□□ -1.33
PSPC1-208ENST00000635562 DDX27Q96GQ7 796 aaKnown RBP6.72□□□□□ -1.33
PSPC1-208ENST00000635562 UPF1Q92900 1129 aaKnown RBP eCLIP6.71□□□□□ -1.34
PSPC1-208ENST00000635562 JPH4Q96JJ6 628 aa6.71□□□□□ -1.34
PSPC1-208ENST00000635562 NCKAP5LQ9HCH0 1330 aa6.71□□□□□ -1.34
PSPC1-208ENST00000635562 GTPBP6O43824 516 aaPredicted RBP6.7□□□□□ -1.34
PSPC1-208ENST00000635562 PTPREP23469 700 aa6.7□□□□□ -1.34
PSPC1-208ENST00000635562 ANO8Q9HCE9 1232 aaPredicted RBP6.7□□□□□ -1.34
PSPC1-208ENST00000635562 PLA2G2EQ9NZK7 142 aa6.7□□□□□ -1.34
PSPC1-208ENST00000635562 FOSBP53539 338 aa6.69□□□□□ -1.34
PSPC1-208ENST00000635562 MFSD10Q14728 455 aa6.69□□□□□ -1.34
PSPC1-208ENST00000635562 EVI5O60447 810 aa6.68□□□□□ -1.34
PSPC1-208ENST00000635562 LARP6Q9BRS8 491 aaKnown RBP6.68□□□□□ -1.34
PSPC1-208ENST00000635562 VPS9D1Q9Y2B5 631 aa6.68□□□□□ -1.34
PSPC1-208ENST00000635562 DCAF8L2P0C7V8 631 aa6.67□□□□□ -1.34
PSPC1-208ENST00000635562 MAP3K9P80192 1104 aa6.67□□□□□ -1.34
PSPC1-208ENST00000635562 ZDHHC16Q969W1 377 aa6.66□□□□□ -1.34
PSPC1-208ENST00000635562 KCTD12Q96CX2 325 aaKnown RBP6.66□□□□□ -1.34
PSPC1-208ENST00000635562 NBPF3Q9H094 633 aa6.66□□□□□ -1.34
PSPC1-208ENST00000635562 FBXW7Q969H0 707 aa6.64□□□□□ -1.35
PSPC1-208ENST00000635562 GOLGA8CPA6NN73 597 aa6.63□□□□□ -1.35
PSPC1-208ENST00000635562 BHMG1C9JSJ3 638 aaPredicted RBP6.63□□□□□ -1.35
PSPC1-208ENST00000635562 MRPL50Q8N5N7 158 aaKnown RBP6.63□□□□□ -1.35
PSPC1-208ENST00000635562 ZBED2Q9BTP6 218 aa6.63□□□□□ -1.35
PSPC1-208ENST00000635562 PPP1R3GB7ZBB8 358 aa6.62□□□□□ -1.35
PSPC1-208ENST00000635562 IFFO2Q5TF58 517 aa6.62□□□□□ -1.35
PSPC1-208ENST00000635562 RGS20O76081 388 aa6.6□□□□□ -1.35
PSPC1-208ENST00000635562 PHF14O94880 888 aa6.6□□□□□ -1.35
PSPC1-208ENST00000635562 PLCB2Q00722 1185 aa6.6□□□□□ -1.35
PSPC1-208ENST00000635562 THSD4Q6ZMP0 1018 aa6.6□□□□□ -1.35
PSPC1-208ENST00000635562 ADAM33Q9BZ11 813 aa6.6□□□□□ -1.35
PSPC1-208ENST00000635562 TYW1BQ6NUM6 668 aa6.59□□□□□ -1.35
PSPC1-208ENST00000635562 WNT2BQ93097 391 aa6.59□□□□□ -1.35
PSPC1-208ENST00000635562 EPAS1Q99814 870 aa6.59□□□□□ -1.35
PSPC1-208ENST00000635562 EMILIN3Q9NT22 766 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms