RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 MAP7D2Q96T17 732 aa14.32□□□□□ -0.12
SRSF4-208ENST00000634348 RDXP35241 583 aaKnown RBP14.32□□□□□ -0.12
SRSF4-208ENST00000634348 MAPK8IP3Q9UPT6 1336 aa14.31□□□□□ -0.12
SRSF4-208ENST00000634348 CHMP7Q8WUX9 453 aaPredicted RBP14.31□□□□□ -0.12
SRSF4-208ENST00000634348 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
SRSF4-208ENST00000634348 HMMRO75330 724 aa14.3□□□□□ -0.12
SRSF4-208ENST00000634348 PRKCSHP14314 528 aaPredicted RBP14.3□□□□□ -0.12
SRSF4-208ENST00000634348 GOLGA2Q08379 1002 aa14.3□□□□□ -0.12
SRSF4-208ENST00000634348 RBM19Q9Y4C8 960 aaKnown RBP14.29□□□□□ -0.12
SRSF4-208ENST00000634348 SIN3AQ96ST3 1273 aa14.29□□□□□ -0.12
SRSF4-208ENST00000634348 CCDC191Q8NCU4 936 aa14.28□□□□□ -0.12
SRSF4-208ENST00000634348 PDE4CQ08493 712 aa14.28□□□□□ -0.12
SRSF4-208ENST00000634348 TPM3P06753 285 aa14.27□□□□□ -0.12
SRSF4-208ENST00000634348 ANO8Q9HCE9 1232 aaPredicted RBP14.27□□□□□ -0.13
SRSF4-208ENST00000634348 SAFB2Q14151 953 aaKnown RBP eCLIP14.27□□□□□ -0.13
SRSF4-208ENST00000634348 MCCP23508 829 aa14.26□□□□□ -0.13
SRSF4-208ENST00000634348 CWC15Q9P013 229 aaKnown RBP14.26□□□□□ -0.13
SRSF4-208ENST00000634348 POGKQ9P215 609 aa14.26□□□□□ -0.13
SRSF4-208ENST00000634348 CCDC66A2RUB6 948 aa14.26□□□□□ -0.13
SRSF4-208ENST00000634348 HSP90B1P14625 803 aaKnown RBP14.26□□□□□ -0.13
SRSF4-208ENST00000634348 CALD1Q05682 793 aaKnown RBP14.26□□□□□ -0.13
SRSF4-208ENST00000634348 CCDC70Q6NSX1 233 aa14.25□□□□□ -0.13
SRSF4-208ENST00000634348 CFAP44Q96MT7 982 aa14.23□□□□□ -0.13
SRSF4-208ENST00000634348 FAM13BQ9NYF5 915 aa14.23□□□□□ -0.13
SRSF4-208ENST00000634348 GNL2Q13823 731 aaKnown RBP14.23□□□□□ -0.13
SRSF4-208ENST00000634348 CEP89Q96ST8 783 aa14.22□□□□□ -0.13
SRSF4-208ENST00000634348 PHF14O94880 888 aa14.22□□□□□ -0.13
SRSF4-208ENST00000634348 CHMP4BQ9H444 224 aaKnown RBP14.21□□□□□ -0.13
SRSF4-208ENST00000634348 HSP90AB3PQ58FF7 597 aa14.2□□□□□ -0.14
SRSF4-208ENST00000634348 MTERF4Q7Z6M4 381 aaKnown RBP14.2□□□□□ -0.14
SRSF4-208ENST00000634348 CCAR2Q8N163 923 aaKnown RBP14.2□□□□□ -0.14
SRSF4-208ENST00000634348 ZNF330Q9Y3S2 320 aaPredicted RBP14.2□□□□□ -0.14
SRSF4-208ENST00000634348 NUDCQ9Y266 331 aa14.19□□□□□ -0.14
SRSF4-208ENST00000634348 H0YHG0 523 aa14.19□□□□□ -0.14
SRSF4-208ENST00000634348 PLCD4Q9BRC7 762 aa14.19□□□□□ -0.14
SRSF4-208ENST00000634348 SLKQ9H2G2 1235 aaPredicted RBP14.19□□□□□ -0.14
SRSF4-208ENST00000634348 MLECQ14165 292 aa14.17□□□□□ -0.14
SRSF4-208ENST00000634348 DYDC1Q8WWB3 177 aa14.17□□□□□ -0.14
SRSF4-208ENST00000634348 SCRIBQ14160 1630 aa14.16□□□□□ -0.14
SRSF4-208ENST00000634348 CSPP1Q1MSJ5 1256 aa14.16□□□□□ -0.14
SRSF4-208ENST00000634348 CCDC34Q96HJ3 373 aa14.16□□□□□ -0.14
SRSF4-208ENST00000634348 DCAF1Q9Y4B6 1507 aa14.16□□□□□ -0.14
SRSF4-208ENST00000634348 PLEKHD1A6NEE1 506 aa14.15□□□□□ -0.14
SRSF4-208ENST00000634348 AK7Q96M32 723 aa14.14□□□□□ -0.15
SRSF4-208ENST00000634348 CDR1P51861 262 aa14.14□□□□□ -0.15
SRSF4-208ENST00000634348 CLIP1P30622 1438 aa14.14□□□□□ -0.15
SRSF4-208ENST00000634348 CFDP1Q9UEE9 299 aaPredicted RBP14.14□□□□□ -0.15
SRSF4-208ENST00000634348 DCTN1Q14203 1278 aa14.14□□□□□ -0.15
SRSF4-208ENST00000634348 CDCA8Q53HL2 280 aa14.13□□□□□ -0.15
SRSF4-208ENST00000634348 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.13□□□□□ -0.15
SRSF4-208ENST00000634348 FBXO3Q9UK99 471 aa14.13□□□□□ -0.15
SRSF4-208ENST00000634348 MS4A1P11836 297 aa14.13□□□□□ -0.15
SRSF4-208ENST00000634348 ZCCHC6Q5VYS8 1495 aaKnown RBP14.12□□□□□ -0.15
SRSF4-208ENST00000634348 FOXD4L1Q9NU39 408 aa14.12□□□□□ -0.15
SRSF4-208ENST00000634348 ACBD3Q9H3P7 528 aa14.12□□□□□ -0.15
SRSF4-208ENST00000634348 CREBRFQ8IUR6 639 aa14.11□□□□□ -0.15
SRSF4-208ENST00000634348 SRPK2P78362 688 aaKnown RBP14.11□□□□□ -0.15
SRSF4-208ENST00000634348 NOL8Q76FK4 1167 aaKnown RBP14.11□□□□□ -0.15
SRSF4-208ENST00000634348 STK26Q9P289 416 aa14.11□□□□□ -0.15
SRSF4-208ENST00000634348 DCAF11Q8TEB1 546 aa14.11□□□□□ -0.15
SRSF4-208ENST00000634348 RUFY1Q96T51 708 aa14.1□□□□□ -0.15
SRSF4-208ENST00000634348 TSR1Q2NL82 804 aaKnown RBP14.1□□□□□ -0.15
SRSF4-208ENST00000634348 NEXNQ0ZGT2 675 aa14.09□□□□□ -0.15
SRSF4-208ENST00000634348 ARGLU1Q9NWB6 273 aaPredicted RBP14.09□□□□□ -0.15
SRSF4-208ENST00000634348 IPO9Q96P70 1041 aaKnown RBP14.08□□□□□ -0.16
SRSF4-208ENST00000634348 ZNF592Q92610 1267 aa14.08□□□□□ -0.16
SRSF4-208ENST00000634348 HSP90B2PQ58FF3 399 aa14.08□□□□□ -0.16
SRSF4-208ENST00000634348 GSE1Q14687 1217 aa14.08□□□□□ -0.16
SRSF4-208ENST00000634348 FOXD4L5Q5VV16 416 aaPredicted RBP14.07□□□□□ -0.16
SRSF4-208ENST00000634348 FOXD4L4Q8WXT5 416 aaPredicted RBP14.07□□□□□ -0.16
SRSF4-208ENST00000634348 DDX11L8A8MPP1 907 aa14.06□□□□□ -0.16
SRSF4-208ENST00000634348 DEF6Q9H4E7 631 aa14.06□□□□□ -0.16
SRSF4-208ENST00000634348 PAK3O75914 559 aaPredicted RBP14.06□□□□□ -0.16
SRSF4-208ENST00000634348 TAF3Q5VWG9 929 aa14.06□□□□□ -0.16
SRSF4-208ENST00000634348 FOXD1Q16676 465 aa14.05□□□□□ -0.16
SRSF4-208ENST00000634348 INCENPQ9NQS7 918 aa14.05□□□□□ -0.16
SRSF4-208ENST00000634348 KIAA1211Q6ZU35 1233 aa14.05□□□□□ -0.16
SRSF4-208ENST00000634348 MORC1Q86VD1 984 aa14.04□□□□□ -0.16
SRSF4-208ENST00000634348 FAM43AQ8N2R8 423 aa14.04□□□□□ -0.16
SRSF4-208ENST00000634348 CHMP3Q9Y3E7 222 aa14.04□□□□□ -0.16
SRSF4-208ENST00000634348 USP8P40818 1118 aa14.04□□□□□ -0.16
SRSF4-208ENST00000634348 ZRSR2Q15696 482 aaKnown RBP14.04□□□□□ -0.16
SRSF4-208ENST00000634348 LEKR1Q6ZMV7 388 aa14.03□□□□□ -0.16
SRSF4-208ENST00000634348 WWC1Q8IX03 1113 aa14.03□□□□□ -0.16
SRSF4-208ENST00000634348 RTF1Q92541 710 aaKnown RBP14.03□□□□□ -0.16
SRSF4-208ENST00000634348 TPM1P09493 284 aa14.03□□□□□ -0.16
SRSF4-208ENST00000634348 MFAP1P55081 439 aaKnown RBP14.02□□□□□ -0.16
SRSF4-208ENST00000634348 ITPRIPQ8IWB1 547 aa14.02□□□□□ -0.16
SRSF4-208ENST00000634348 GOLGA6L19H0YKK7 550 aa14.02□□□□□ -0.16
SRSF4-208ENST00000634348 KIF3AQ9Y496 699 aa14.02□□□□□ -0.17
SRSF4-208ENST00000634348 FOXD4L6Q3SYB3 417 aaPredicted RBP14.01□□□□□ -0.17
SRSF4-208ENST00000634348 FOXD4L3Q6VB84 417 aaPredicted RBP14.01□□□□□ -0.17
SRSF4-208ENST00000634348 CCDC9Q9Y3X0 531 aaKnown RBP14□□□□□ -0.17
SRSF4-208ENST00000634348 TPM2P07951 284 aa14□□□□□ -0.17
SRSF4-208ENST00000634348 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
SRSF4-208ENST00000634348 CLUAP1Q96AJ1 413 aa14□□□□□ -0.17
SRSF4-208ENST00000634348 TRIM6-TRIM34B2RNG4 842 aa13.99□□□□□ -0.17
SRSF4-208ENST00000634348 TMF1P82094 1093 aa13.99□□□□□ -0.17
SRSF4-208ENST00000634348 SKOR2Q2VWA4 1001 aaPredicted RBP13.99□□□□□ -0.17
SRSF4-208ENST00000634348 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms