RNA–Protein interactions for RNA: ENST00000628733.2

UBE3A-216, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-216ENST00000628733 NLRP6P59044 892 aa8.94□□□□□ -0.98
UBE3A-216ENST00000628733 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
UBE3A-216ENST00000628733 KRTAP3-2Q9BYR7 98 aa8.94□□□□□ -0.98
UBE3A-216ENST00000628733 HOXB1P14653 301 aaPredicted RBP8.92□□□□□ -0.98
UBE3A-216ENST00000628733 TAOK2Q9UL54 1235 aa8.92□□□□□ -0.98
UBE3A-216ENST00000628733 KIF3CO14782 793 aa8.9□□□□□ -0.98
UBE3A-216ENST00000628733 DOK7Q18PE1 504 aa8.89□□□□□ -0.99
UBE3A-216ENST00000628733 GPR153Q6NV75 609 aa8.88□□□□□ -0.99
UBE3A-216ENST00000628733 PPP1R37O75864 691 aa8.86□□□□□ -0.99
UBE3A-216ENST00000628733 ZSWIM6Q9HCJ5 1215 aa8.84□□□□□ -0.99
UBE3A-216ENST00000628733 HS6ST3Q8IZP7 471 aa8.83□□□□□ -1
UBE3A-216ENST00000628733 ZNF710Q8N1W2 664 aa8.83□□□□□ -1
UBE3A-216ENST00000628733 C2orf72A6NCS6 295 aa8.82□□□□□ -1
UBE3A-216ENST00000628733 ERBB3P21860 1342 aa8.8□□□□□ -1
UBE3A-216ENST00000628733 KHSRPQ92945 711 aaKnown RBP eCLIP8.79□□□□□ -14e-7■■■□□ 15.5
UBE3A-216ENST00000628733 RNF166Q96A37 237 aaPredicted RBP8.79□□□□□ -1
UBE3A-216ENST00000628733 DNAJC5Q9H3Z4 198 aa8.79□□□□□ -1
UBE3A-216ENST00000628733 RIMBP2O15034 1052 aa8.78□□□□□ -1
UBE3A-216ENST00000628733 NKX1-1Q15270 411 aaPredicted RBP8.78□□□□□ -1
UBE3A-216ENST00000628733 ARSIQ5FYB1 569 aa8.78□□□□□ -1
UBE3A-216ENST00000628733 VARS2Q5ST30 1063 aaKnown RBP8.77□□□□□ -1.01
UBE3A-216ENST00000628733 SLC34A2O95436 690 aa8.74□□□□□ -1.01
UBE3A-216ENST00000628733 ZNF687Q8N1G0 1237 aa8.73□□□□□ -1.01
UBE3A-216ENST00000628733 MYT1LQ9UL68 1186 aa8.73□□□□□ -1.01
UBE3A-216ENST00000628733 KDM4FA0A1W2PPD8 638 aa8.72□□□□□ -1.01
UBE3A-216ENST00000628733 CHGAP10645 457 aaKnown RBP8.72□□□□□ -1.01
UBE3A-216ENST00000628733 ZNF316A6NFI3 1004 aaPredicted RBP8.69□□□□□ -1.02
UBE3A-216ENST00000628733 TMC2Q8TDI7 906 aa8.68□□□□□ -1.02
UBE3A-216ENST00000628733 PCDHGA4Q9Y5G9 962 aa8.68□□□□□ -1.02
UBE3A-216ENST00000628733 POTEEQ6S8J3 1075 aa8.67□□□□□ -1.02
UBE3A-216ENST00000628733 NUDT7P0C024 238 aa8.66□□□□□ -1.02
UBE3A-216ENST00000628733 FOXK1P85037 733 aa8.66□□□□□ -1.02
UBE3A-216ENST00000628733 GPHNQ9NQX3 736 aaPredicted RBP8.66□□□□□ -1.02
UBE3A-216ENST00000628733 DSG2Q14126 1118 aa8.64□□□□□ -1.03
UBE3A-216ENST00000628733 PTCD2Q8WV60 388 aaKnown RBP8.64□□□□□ -1.03
UBE3A-216ENST00000628733 LHX6Q9UPM6 363 aa8.64□□□□□ -1.03
UBE3A-216ENST00000628733 GTPBP6O43824 516 aaPredicted RBP8.62□□□□□ -1.03
UBE3A-216ENST00000628733 PTGER2P43116 358 aa8.62□□□□□ -1.03
UBE3A-216ENST00000628733 PLPP6Q8IY26 295 aa8.61□□□□□ -1.03
UBE3A-216ENST00000628733 CRISPLD2Q9H0B8 497 aa8.61□□□□□ -1.03
UBE3A-216ENST00000628733 ANKRD13DQ6ZTN6 518 aa8.6□□□□□ -1.03
UBE3A-216ENST00000628733 NCKAP5LQ9HCH0 1330 aa8.59□□□□□ -1.03
UBE3A-216ENST00000628733 LSM11P83369 360 aaKnown RBP eCLIP8.58□□□□□ -1.04
UBE3A-216ENST00000628733 PBX2P40425 430 aa8.55□□□□□ -1.04
UBE3A-216ENST00000628733 OXER1Q8TDS5 423 aa8.55□□□□□ -1.04
UBE3A-216ENST00000628733 AXIN2Q9Y2T1 843 aa8.55□□□□□ -1.04
UBE3A-216ENST00000628733 RYDENQ9NUL5 291 aaKnown RBP8.53□□□□□ -1.04
UBE3A-216ENST00000628733 PPP1R15BQ5SWA1 713 aa8.49□□□□□ -1.05
UBE3A-216ENST00000628733 CADPS2Q86UW7 1296 aa8.49□□□□□ -1.05
UBE3A-216ENST00000628733 PSDA5PKW4 1024 aaPredicted RBP8.48□□□□□ -1.05
UBE3A-216ENST00000628733 MFSD10Q14728 455 aa8.48□□□□□ -1.05
UBE3A-216ENST00000628733 DMRTA1Q5VZB9 504 aa8.48□□□□□ -1.05
UBE3A-216ENST00000628733 PLA2G2EQ9NZK7 142 aa8.48□□□□□ -1.05
UBE3A-216ENST00000628733 ARHGAP33O14559 1287 aa8.47□□□□□ -1.05
UBE3A-216ENST00000628733 PSEN2P49810 448 aa8.46□□□□□ -1.06
UBE3A-216ENST00000628733 UPF1Q92900 1129 aaKnown RBP eCLIP8.46□□□□□ -1.06
UBE3A-216ENST00000628733 HRO43593 1189 aa8.45□□□□□ -1.06
UBE3A-216ENST00000628733 ADGRD1Q6QNK2 874 aa8.45□□□□□ -1.06
UBE3A-216ENST00000628733 ANO8Q9HCE9 1232 aaPredicted RBP8.45□□□□□ -1.06
UBE3A-216ENST00000628733 PDE4AP27815 886 aa8.44□□□□□ -1.06
UBE3A-216ENST00000628733 TBC1D12O60347 775 aa8.43□□□□□ -1.06
UBE3A-216ENST00000628733 LARP6Q9BRS8 491 aaKnown RBP8.43□□□□□ -1.06
UBE3A-216ENST00000628733 EMILIN3Q9NT22 766 aa8.43□□□□□ -1.06
UBE3A-216ENST00000628733 TK2O00142 265 aa8.42□□□□□ -1.06
UBE3A-216ENST00000628733 FOSBP53539 338 aa8.42□□□□□ -1.06
UBE3A-216ENST00000628733 PPP4R3BQ5MIZ7 849 aa8.42□□□□□ -1.06
UBE3A-216ENST00000628733 HCSTQ9UBK5 93 aa8.42□□□□□ -1.06
UBE3A-216ENST00000628733 DDX27Q96GQ7 796 aaKnown RBP8.4□□□□□ -1.06
UBE3A-216ENST00000628733 BCL2L12Q9HB09 334 aa8.39□□□□□ -1.07
UBE3A-216ENST00000628733 EVI5O60447 810 aa8.38□□□□□ -1.07
UBE3A-216ENST00000628733 DCAF8L2P0C7V8 631 aa8.38□□□□□ -1.07
UBE3A-216ENST00000628733 KCNK17Q96T54 332 aa8.38□□□□□ -1.07
UBE3A-216ENST00000628733 ZNF454Q8N9F8 522 aa8.37□□□□□ -1.07
UBE3A-216ENST00000628733 CAMK2BQ13554 666 aa8.36□□□□□ -1.07
UBE3A-216ENST00000628733 JPH4Q96JJ6 628 aa8.36□□□□□ -1.07
UBE3A-216ENST00000628733 VPS9D1Q9Y2B5 631 aa8.36□□□□□ -1.07
UBE3A-216ENST00000628733 SLC4A5Q9BY07 1137 aa8.34□□□□□ -1.07
UBE3A-216ENST00000628733 ADAM33Q9BZ11 813 aa8.34□□□□□ -1.07
UBE3A-216ENST00000628733 BHMG1C9JSJ3 638 aaPredicted RBP8.33□□□□□ -1.08
UBE3A-216ENST00000628733 BBXQ8WY36 941 aaPredicted RBP8.33□□□□□ -1.08
UBE3A-216ENST00000628733 ZBED2Q9BTP6 218 aa8.32□□□□□ -1.08
UBE3A-216ENST00000628733 RTN4Q9NQC3 1192 aaKnown RBP8.31□□□□□ -1.08
UBE3A-216ENST00000628733 PCDHGA10Q9Y5H3 936 aa8.31□□□□□ -1.08
UBE3A-216ENST00000628733 ZDHHC16Q969W1 377 aa8.3□□□□□ -1.08
UBE3A-216ENST00000628733 MAP3K9P80192 1104 aa8.29□□□□□ -1.08
UBE3A-216ENST00000628733 PTPREP23469 700 aa8.27□□□□□ -1.09
UBE3A-216ENST00000628733 STAC3Q96MF2 364 aa8.27□□□□□ -1.09
UBE3A-216ENST00000628733 COL9A1P20849 921 aa8.26□□□□□ -1.09
UBE3A-216ENST00000628733 DPYSL4O14531 572 aa8.25□□□□□ -1.09
UBE3A-216ENST00000628733 AMER1Q5JTC6 1135 aaPredicted RBP8.25□□□□□ -1.09
UBE3A-216ENST00000628733 KCTD12Q96CX2 325 aaKnown RBP8.25□□□□□ -1.09
UBE3A-216ENST00000628733 PHF14O94880 888 aa8.24□□□□□ -1.09
UBE3A-216ENST00000628733 KCNH8Q96L42 1107 aa8.23□□□□□ -1.09
UBE3A-216ENST00000628733 PPP1R3GB7ZBB8 358 aa8.22□□□□□ -1.09
UBE3A-216ENST00000628733 TYW1BQ6NUM6 668 aa8.22□□□□□ -1.09
UBE3A-216ENST00000628733 PROX2Q3B8N5 592 aa8.21□□□□□ -1.1
UBE3A-216ENST00000628733 THSD4Q6ZMP0 1018 aa8.2□□□□□ -1.1
UBE3A-216ENST00000628733 SPRYD3Q8NCJ5 442 aa8.2□□□□□ -1.1
UBE3A-216ENST00000628733 FBXW7Q969H0 707 aa8.2□□□□□ -1.1
UBE3A-216ENST00000628733 IRX2Q9BZI1 471 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms