RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 VGFO15240 615 aaPredicted RBP11.38□□□□□ -0.59
VBP1-204ENST00000625964 MS4A4AQ96JQ5 239 aa11.36□□□□□ -0.59
VBP1-204ENST00000625964 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.34□□□□□ -0.59
VBP1-204ENST00000625964 ZFP91Q96JP5 570 aaPredicted RBP11.34□□□□□ -0.59
VBP1-204ENST00000625964 PHF8Q9UPP1 1060 aa11.34□□□□□ -0.59
VBP1-204ENST00000625964 ARSIQ5FYB1 569 aa11.31□□□□□ -0.6
VBP1-204ENST00000625964 NLRP6P59044 892 aa11.3□□□□□ -0.6
VBP1-204ENST00000625964 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
VBP1-204ENST00000625964 RNF25Q96BH1 459 aaPredicted RBP11.3□□□□□ -0.6
VBP1-204ENST00000625964 TAOK2Q9UL54 1235 aa11.3□□□□□ -0.6
VBP1-204ENST00000625964 ANKRD13DQ6ZTN6 518 aa11.27□□□□□ -0.61
VBP1-204ENST00000625964 LSM11P83369 360 aaKnown RBP eCLIP11.24□□□□□ -0.61
VBP1-204ENST00000625964 PBX2P40425 430 aa11.23□□□□□ -0.61
VBP1-204ENST00000625964 FBXO22Q8NEZ5 403 aa11.22□□□□□ -0.61
VBP1-204ENST00000625964 KHSRPQ92945 711 aaKnown RBP eCLIP11.19□□□□□ -0.622e-6■□□□□ 9.9
VBP1-204ENST00000625964 KIF3CO14782 793 aa11.18□□□□□ -0.62
VBP1-204ENST00000625964 BCL11BQ9C0K0 894 aaPredicted RBP11.17□□□□□ -0.62
VBP1-204ENST00000625964 SLC34A2O95436 690 aa11.16□□□□□ -0.62
VBP1-204ENST00000625964 STK24Q9Y6E0 443 aa11.14□□□□□ -0.63
VBP1-204ENST00000625964 C2orf72A6NCS6 295 aa11.14□□□□□ -0.63
VBP1-204ENST00000625964 NUDT7P0C024 238 aa11.13□□□□□ -0.63
VBP1-204ENST00000625964 MFRPQ9BY79 579 aa11.13□□□□□ -0.63
VBP1-204ENST00000625964 PCDHGA4Q9Y5G9 962 aa11.11□□□□□ -0.63
VBP1-204ENST00000625964 HCSTQ9UBK5 93 aa11.1□□□□□ -0.63
VBP1-204ENST00000625964 LHX6Q9UPM6 363 aa11.1□□□□□ -0.63
VBP1-204ENST00000625964 PSDA5PKW4 1024 aaPredicted RBP11.09□□□□□ -0.63
VBP1-204ENST00000625964 TMC2Q8TDI7 906 aa11.08□□□□□ -0.64
VBP1-204ENST00000625964 POTEEQ6S8J3 1075 aa11.07□□□□□ -0.64
VBP1-204ENST00000625964 STK25O00506 426 aa11.06□□□□□ -0.64
VBP1-204ENST00000625964 PLA2G2EQ9NZK7 142 aa11.06□□□□□ -0.64
VBP1-204ENST00000625964 ARHGAP33O14559 1287 aa11.04□□□□□ -0.64
VBP1-204ENST00000625964 AXIN2Q9Y2T1 843 aa11.04□□□□□ -0.64
VBP1-204ENST00000625964 ADGRD1Q6QNK2 874 aa11.02□□□□□ -0.65
VBP1-204ENST00000625964 TK2O00142 265 aa11.01□□□□□ -0.65
VBP1-204ENST00000625964 ECM2O94769 699 aaPredicted RBP10.96□□□□□ -0.65
VBP1-204ENST00000625964 PTCD2Q8WV60 388 aaKnown RBP10.96□□□□□ -0.65
VBP1-204ENST00000625964 KDM4FA0A1W2PPD8 638 aa10.95□□□□□ -0.66
VBP1-204ENST00000625964 HRO43593 1189 aa10.94□□□□□ -0.66
VBP1-204ENST00000625964 PPP4R3BQ5MIZ7 849 aa10.9□□□□□ -0.66
VBP1-204ENST00000625964 TBC1D12O60347 775 aa10.89□□□□□ -0.67
VBP1-204ENST00000625964 FOXK1P85037 733 aa10.89□□□□□ -0.67
VBP1-204ENST00000625964 STAC3Q96MF2 364 aa10.89□□□□□ -0.67
VBP1-204ENST00000625964 DMRTA1Q5VZB9 504 aa10.88□□□□□ -0.67
VBP1-204ENST00000625964 KCNH8Q96L42 1107 aa10.88□□□□□ -0.67
VBP1-204ENST00000625964 PPP1R37O75864 691 aa10.87□□□□□ -0.67
VBP1-204ENST00000625964 PSEN2P49810 448 aa10.87□□□□□ -0.67
VBP1-204ENST00000625964 RGL2O15211 777 aa10.85□□□□□ -0.67
VBP1-204ENST00000625964 PLPP6Q8IY26 295 aa10.85□□□□□ -0.67
VBP1-204ENST00000625964 GPHNQ9NQX3 736 aaPredicted RBP10.85□□□□□ -0.67
VBP1-204ENST00000625964 KCTD12Q96CX2 325 aaKnown RBP10.84□□□□□ -0.67
VBP1-204ENST00000625964 RGS20O76081 388 aa10.82□□□□□ -0.68
VBP1-204ENST00000625964 PKD2Q13563 968 aa10.82□□□□□ -0.68
VBP1-204ENST00000625964 IFFO2Q5TF58 517 aa10.79□□□□□ -0.68
VBP1-204ENST00000625964 SLC4A5Q9BY07 1137 aa10.78□□□□□ -0.68
VBP1-204ENST00000625964 DSG2Q14126 1118 aa10.77□□□□□ -0.69
VBP1-204ENST00000625964 KCNK17Q96T54 332 aa10.77□□□□□ -0.69
VBP1-204ENST00000625964 VPS9D1Q9Y2B5 631 aa10.77□□□□□ -0.69
VBP1-204ENST00000625964 OXER1Q8TDS5 423 aa10.72□□□□□ -0.69
VBP1-204ENST00000625964 PTPN5P54829 565 aa10.71□□□□□ -0.69
VBP1-204ENST00000625964 BCL2L12Q9HB09 334 aa10.71□□□□□ -0.69
VBP1-204ENST00000625964 HS6ST3Q8IZP7 471 aa10.7□□□□□ -0.7
VBP1-204ENST00000625964 ZNF454Q8N9F8 522 aa10.68□□□□□ -0.7
VBP1-204ENST00000625964 BHMG1C9JSJ3 638 aaPredicted RBP10.68□□□□□ -0.7
VBP1-204ENST00000625964 THSD4Q6ZMP0 1018 aa10.68□□□□□ -0.7
VBP1-204ENST00000625964 PTPREP23469 700 aa10.67□□□□□ -0.7
VBP1-204ENST00000625964 GOLGA8CPA6NN73 597 aa10.66□□□□□ -0.7
VBP1-204ENST00000625964 IRX2Q9BZI1 471 aaPredicted RBP10.65□□□□□ -0.7
VBP1-204ENST00000625964 RYDENQ9NUL5 291 aaKnown RBP10.65□□□□□ -0.7
VBP1-204ENST00000625964 FOSBP53539 338 aa10.64□□□□□ -0.71
VBP1-204ENST00000625964 A0A0G2JS52 829 aa10.63□□□□□ -0.71
VBP1-204ENST00000625964 MRPL50Q8N5N7 158 aaKnown RBP10.63□□□□□ -0.71
VBP1-204ENST00000625964 UPF1Q92900 1129 aaKnown RBP eCLIP10.63□□□□□ -0.71
VBP1-204ENST00000625964 WNT2BQ93097 391 aa10.63□□□□□ -0.71
VBP1-204ENST00000625964 ZBED2Q9BTP6 218 aa10.63□□□□□ -0.71
VBP1-204ENST00000625964 NBPF3Q9H094 633 aa10.61□□□□□ -0.71
VBP1-204ENST00000625964 CRISPLD2Q9H0B8 497 aa10.61□□□□□ -0.71
VBP1-204ENST00000625964 ANO8Q9HCE9 1232 aaPredicted RBP10.61□□□□□ -0.71
VBP1-204ENST00000625964 DNAJC5Q9H3Z4 198 aa10.6□□□□□ -0.71
VBP1-204ENST00000625964 PPP1R15BQ5SWA1 713 aa10.59□□□□□ -0.71
VBP1-204ENST00000625964 JPH4Q96JJ6 628 aa10.59□□□□□ -0.71
VBP1-204ENST00000625964 ZDHHC16Q969W1 377 aa10.57□□□□□ -0.72
VBP1-204ENST00000625964 PDE4AP27815 886 aa10.56□□□□□ -0.72
VBP1-204ENST00000625964 CHGAP10645 457 aaKnown RBP10.54□□□□□ -0.72
VBP1-204ENST00000625964 EVI5O60447 810 aa10.53□□□□□ -0.72
VBP1-204ENST00000625964 ADAM33Q9BZ11 813 aa10.53□□□□□ -0.72
VBP1-204ENST00000625964 ITGBL1O95965 494 aaPredicted RBP10.5□□□□□ -0.73
VBP1-204ENST00000625964 RABGEF1Q9UJ41 708 aa10.5□□□□□ -0.73
VBP1-204ENST00000625964 PPP1R3GB7ZBB8 358 aa10.49□□□□□ -0.73
VBP1-204ENST00000625964 ANKK1Q8NFD2 765 aa10.49□□□□□ -0.73
VBP1-204ENST00000625964 NKX1-1Q15270 411 aaPredicted RBP10.48□□□□□ -0.73
VBP1-204ENST00000625964 NYAP1Q6ZVC0 841 aa10.48□□□□□ -0.73
VBP1-204ENST00000625964 NCKAP5LQ9HCH0 1330 aa10.47□□□□□ -0.73
VBP1-204ENST00000625964 MAP3K9P80192 1104 aa10.47□□□□□ -0.73
VBP1-204ENST00000625964 LAPTM4BQ86VI4 370 aa10.47□□□□□ -0.73
VBP1-204ENST00000625964 DDX27Q96GQ7 796 aaKnown RBP10.43□□□□□ -0.74
VBP1-204ENST00000625964 ONECUT3O60422 494 aaPredicted RBP10.43□□□□□ -0.74
VBP1-204ENST00000625964 FBXW7Q969H0 707 aa10.43□□□□□ -0.74
VBP1-204ENST00000625964 SOWAHBA6NEL2 793 aa10.42□□□□□ -0.74
VBP1-204ENST00000625964 LARP6Q9BRS8 491 aaKnown RBP10.42□□□□□ -0.74
VBP1-204ENST00000625964 MFSD10Q14728 455 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms