RNA–Protein interactions for RNA: ENST00000622329.1

RNU6-538P-201, Transcript of RNA, U6 small nuclear 538, pseudogene, humanhuman

BASIC

Gene RNU6-538P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-538P-201ENST00000622329 BCL11BQ9C0K0 894 aaPredicted RBP12.74□□□□□ -0.37
RNU6-538P-201ENST00000622329 VARS2Q5ST30 1063 aaKnown RBP12.73□□□□□ -0.37
RNU6-538P-201ENST00000622329 MFRPQ9BY79 579 aa12.73□□□□□ -0.37
RNU6-538P-201ENST00000622329 ZSWIM6Q9HCJ5 1215 aa12.72□□□□□ -0.37
RNU6-538P-201ENST00000622329 RIMBP2O15034 1052 aa12.69□□□□□ -0.38
RNU6-538P-201ENST00000622329 NLRP6P59044 892 aa12.68□□□□□ -0.38
RNU6-538P-201ENST00000622329 KIF3CO14782 793 aa12.67□□□□□ -0.38
RNU6-538P-201ENST00000622329 KHSRPQ92945 711 aaKnown RBP eCLIP12.67□□□□□ -0.38
RNU6-538P-201ENST00000622329 ZNF687Q8N1G0 1237 aa12.66□□□□□ -0.38
RNU6-538P-201ENST00000622329 ARSIQ5FYB1 569 aa12.65□□□□□ -0.38
RNU6-538P-201ENST00000622329 STK24Q9Y6E0 443 aa12.65□□□□□ -0.38
RNU6-538P-201ENST00000622329 PKD2Q13563 968 aa12.64□□□□□ -0.39
RNU6-538P-201ENST00000622329 RGL2O15211 777 aa12.61□□□□□ -0.39
RNU6-538P-201ENST00000622329 STK25O00506 426 aa12.59□□□□□ -0.39
RNU6-538P-201ENST00000622329 C2orf72A6NCS6 295 aa12.58□□□□□ -0.4
RNU6-538P-201ENST00000622329 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
RNU6-538P-201ENST00000622329 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
RNU6-538P-201ENST00000622329 RNF166Q96A37 237 aaPredicted RBP12.55□□□□□ -0.4
RNU6-538P-201ENST00000622329 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
RNU6-538P-201ENST00000622329 PPP1R37O75864 691 aa12.52□□□□□ -0.41
RNU6-538P-201ENST00000622329 POTEEQ6S8J3 1075 aa12.51□□□□□ -0.41
RNU6-538P-201ENST00000622329 MYT1LQ9UL68 1186 aa12.5□□□□□ -0.41
RNU6-538P-201ENST00000622329 NUDT7P0C024 238 aa12.48□□□□□ -0.41
RNU6-538P-201ENST00000622329 SLC34A2O95436 690 aa12.46□□□□□ -0.41
RNU6-538P-201ENST00000622329 LHX6Q9UPM6 363 aa12.44□□□□□ -0.42
RNU6-538P-201ENST00000622329 PCDHGA4Q9Y5G9 962 aa12.44□□□□□ -0.42
RNU6-538P-201ENST00000622329 LSM11P83369 360 aaKnown RBP eCLIP12.43□□□□□ -0.42
RNU6-538P-201ENST00000622329 KDM4FA0A1W2PPD8 638 aa12.42□□□□□ -0.42
RNU6-538P-201ENST00000622329 ANKRD13DQ6ZTN6 518 aa12.42□□□□□ -0.42
RNU6-538P-201ENST00000622329 PTGER2P43116 358 aa12.38□□□□□ -0.43
RNU6-538P-201ENST00000622329 AXIN2Q9Y2T1 843 aa12.38□□□□□ -0.43
RNU6-538P-201ENST00000622329 TMC2Q8TDI7 906 aa12.36□□□□□ -0.43
RNU6-538P-201ENST00000622329 PBX2P40425 430 aa12.33□□□□□ -0.44
RNU6-538P-201ENST00000622329 PTCD2Q8WV60 388 aaKnown RBP12.3□□□□□ -0.44
RNU6-538P-201ENST00000622329 HS6ST3Q8IZP7 471 aa12.29□□□□□ -0.44
RNU6-538P-201ENST00000622329 FOXK1P85037 733 aa12.28□□□□□ -0.44
RNU6-538P-201ENST00000622329 DSG2Q14126 1118 aa12.25□□□□□ -0.45
RNU6-538P-201ENST00000622329 PLPP6Q8IY26 295 aa12.25□□□□□ -0.45
RNU6-538P-201ENST00000622329 GPHNQ9NQX3 736 aaPredicted RBP12.25□□□□□ -0.45
RNU6-538P-201ENST00000622329 NKX1-1Q15270 411 aaPredicted RBP12.24□□□□□ -0.45
RNU6-538P-201ENST00000622329 DMRTA1Q5VZB9 504 aa12.23□□□□□ -0.45
RNU6-538P-201ENST00000622329 ARHGAP33O14559 1287 aa12.22□□□□□ -0.45
RNU6-538P-201ENST00000622329 ADGRD1Q6QNK2 874 aa12.22□□□□□ -0.45
RNU6-538P-201ENST00000622329 HRO43593 1189 aa12.2□□□□□ -0.46
RNU6-538P-201ENST00000622329 PSEN2P49810 448 aa12.2□□□□□ -0.46
RNU6-538P-201ENST00000622329 DNAJC5Q9H3Z4 198 aa12.19□□□□□ -0.46
RNU6-538P-201ENST00000622329 PSDA5PKW4 1024 aaPredicted RBP12.17□□□□□ -0.46
RNU6-538P-201ENST00000622329 TK2O00142 265 aa12.14□□□□□ -0.47
RNU6-538P-201ENST00000622329 CHGAP10645 457 aaKnown RBP12.14□□□□□ -0.47
RNU6-538P-201ENST00000622329 OXER1Q8TDS5 423 aa12.13□□□□□ -0.47
RNU6-538P-201ENST00000622329 CRISPLD2Q9H0B8 497 aa12.12□□□□□ -0.47
RNU6-538P-201ENST00000622329 HCSTQ9UBK5 93 aa12.09□□□□□ -0.47
RNU6-538P-201ENST00000622329 PPP4R3BQ5MIZ7 849 aa12.08□□□□□ -0.48
RNU6-538P-201ENST00000622329 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
RNU6-538P-201ENST00000622329 PLA2G2EQ9NZK7 142 aa12.07□□□□□ -0.48
RNU6-538P-201ENST00000622329 TBC1D12O60347 775 aa12.04□□□□□ -0.48
RNU6-538P-201ENST00000622329 UPF1Q92900 1129 aaKnown RBP eCLIP12.04□□□□□ -0.48
RNU6-538P-201ENST00000622329 KCNK17Q96T54 332 aa12.04□□□□□ -0.48
RNU6-538P-201ENST00000622329 SLC24A1O60721 1099 aa12.03□□□□□ -0.48
RNU6-538P-201ENST00000622329 PPP1R15BQ5SWA1 713 aa12.02□□□□□ -0.49
RNU6-538P-201ENST00000622329 VPS9D1Q9Y2B5 631 aa12.02□□□□□ -0.49
RNU6-538P-201ENST00000622329 FOSBP53539 338 aa11.99□□□□□ -0.49
RNU6-538P-201ENST00000622329 KCTD12Q96CX2 325 aaKnown RBP11.99□□□□□ -0.49
RNU6-538P-201ENST00000622329 BCL2L12Q9HB09 334 aa11.99□□□□□ -0.49
RNU6-538P-201ENST00000622329 GTPBP6O43824 516 aaPredicted RBP11.98□□□□□ -0.49
RNU6-538P-201ENST00000622329 ZNF454Q8N9F8 522 aa11.98□□□□□ -0.49
RNU6-538P-201ENST00000622329 ANO8Q9HCE9 1232 aaPredicted RBP11.98□□□□□ -0.49
RNU6-538P-201ENST00000622329 BHMG1C9JSJ3 638 aaPredicted RBP11.96□□□□□ -0.49
RNU6-538P-201ENST00000622329 SLC4A5Q9BY07 1137 aa11.95□□□□□ -0.5
RNU6-538P-201ENST00000622329 ZBED2Q9BTP6 218 aa11.92□□□□□ -0.5
RNU6-538P-201ENST00000622329 RYDENQ9NUL5 291 aaKnown RBP11.91□□□□□ -0.5
RNU6-538P-201ENST00000622329 PDE4AP27815 886 aa11.9□□□□□ -0.5
RNU6-538P-201ENST00000622329 MFSD10Q14728 455 aa11.9□□□□□ -0.5
RNU6-538P-201ENST00000622329 JPH4Q96JJ6 628 aa11.9□□□□□ -0.5
RNU6-538P-201ENST00000622329 ADAM33Q9BZ11 813 aa11.9□□□□□ -0.5
RNU6-538P-201ENST00000622329 EVI5O60447 810 aa11.89□□□□□ -0.51
RNU6-538P-201ENST00000622329 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
RNU6-538P-201ENST00000622329 PTPREP23469 700 aa11.86□□□□□ -0.51
RNU6-538P-201ENST00000622329 LARP6Q9BRS8 491 aaKnown RBP11.86□□□□□ -0.51
RNU6-538P-201ENST00000622329 CADPS2Q86UW7 1296 aa11.85□□□□□ -0.51
RNU6-538P-201ENST00000622329 PTPN5P54829 565 aa11.84□□□□□ -0.51
RNU6-538P-201ENST00000622329 THSD4Q6ZMP0 1018 aa11.84□□□□□ -0.51
RNU6-538P-201ENST00000622329 ZDHHC16Q969W1 377 aa11.84□□□□□ -0.51
RNU6-538P-201ENST00000622329 DDX27Q96GQ7 796 aaKnown RBP11.84□□□□□ -0.51
RNU6-538P-201ENST00000622329 KCNH8Q96L42 1107 aa11.84□□□□□ -0.51
RNU6-538P-201ENST00000622329 STAC3Q96MF2 364 aa11.81□□□□□ -0.52
RNU6-538P-201ENST00000622329 PCDHGA10Q9Y5H3 936 aa11.81□□□□□ -0.52
RNU6-538P-201ENST00000622329 COL9A1P20849 921 aa11.78□□□□□ -0.52
RNU6-538P-201ENST00000622329 IFFO2Q5TF58 517 aa11.78□□□□□ -0.52
RNU6-538P-201ENST00000622329 MAP3K9P80192 1104 aa11.76□□□□□ -0.53
RNU6-538P-201ENST00000622329 PROX2Q3B8N5 592 aa11.76□□□□□ -0.53
RNU6-538P-201ENST00000622329 WNT2BQ93097 391 aa11.76□□□□□ -0.53
RNU6-538P-201ENST00000622329 MRPL50Q8N5N7 158 aaKnown RBP11.75□□□□□ -0.53
RNU6-538P-201ENST00000622329 PPP1R3GB7ZBB8 358 aa11.73□□□□□ -0.53
RNU6-538P-201ENST00000622329 CAMK2BQ13554 666 aa11.7□□□□□ -0.54
RNU6-538P-201ENST00000622329 A0A0G2JS52 829 aa11.69□□□□□ -0.54
RNU6-538P-201ENST00000622329 NBPF3Q9H094 633 aa11.69□□□□□ -0.54
RNU6-538P-201ENST00000622329 RABGEF1Q9UJ41 708 aa11.69□□□□□ -0.54
RNU6-538P-201ENST00000622329 PHF14O94880 888 aa11.68□□□□□ -0.54
RNU6-538P-201ENST00000622329 TYW1BQ6NUM6 668 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms