RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 ROCK2O75116 1388 aaKnown RBP17.6■□□□□ 0.41
SIRPA-204ENST00000622179 EFCAB5A4FU69 1503 aa17.6■□□□□ 0.41
SIRPA-204ENST00000622179 TMF1P82094 1093 aa17.6■□□□□ 0.41
SIRPA-204ENST00000622179 EFCAB2Q5VUJ9 269 aa17.59■□□□□ 0.41
SIRPA-204ENST00000622179 NBR1Q14596 966 aa17.59■□□□□ 0.41
SIRPA-204ENST00000622179 CDCA8Q53HL2 280 aa17.59■□□□□ 0.41
SIRPA-204ENST00000622179 TSHZ2Q9NRE2 1034 aa17.59■□□□□ 0.41
SIRPA-204ENST00000622179 GRIN2BQ13224 1484 aa17.58■□□□□ 0.41
SIRPA-204ENST00000622179 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.4
SIRPA-204ENST00000622179 PRKRIP1Q9H875 184 aaPredicted RBP17.58■□□□□ 0.4
SIRPA-204ENST00000622179 PTPRGP23470 1445 aa17.57■□□□□ 0.4
SIRPA-204ENST00000622179 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.57■□□□□ 0.4
SIRPA-204ENST00000622179 PCF11O94913 1555 aaKnown RBP17.56■□□□□ 0.4
SIRPA-204ENST00000622179 TNNT2P45379 298 aaPredicted RBP17.56■□□□□ 0.4
SIRPA-204ENST00000622179 RBM19Q9Y4C8 960 aaKnown RBP17.55■□□□□ 0.4
SIRPA-204ENST00000622179 ZBTB47Q9UFB7 747 aaPredicted RBP17.55■□□□□ 0.4
SIRPA-204ENST00000622179 PRDM2Q13029 1718 aa17.55■□□□□ 0.4
SIRPA-204ENST00000622179 NEUROD2Q15784 382 aa17.54■□□□□ 0.4
SIRPA-204ENST00000622179 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
SIRPA-204ENST00000622179 WASHC2AQ641Q2 1341 aa17.53■□□□□ 0.4
SIRPA-204ENST00000622179 WDR97A6NE52 1622 aa17.53■□□□□ 0.4
SIRPA-204ENST00000622179 HFM1A2PYH4 1435 aa17.52■□□□□ 0.4
SIRPA-204ENST00000622179 GGT6Q6P531 493 aa17.52■□□□□ 0.39
SIRPA-204ENST00000622179 RSPH4AQ5TD94 716 aa17.51■□□□□ 0.39
SIRPA-204ENST00000622179 ANP32EQ9BTT0 268 aa17.5■□□□□ 0.39
SIRPA-204ENST00000622179 KIF3BO15066 747 aa17.49■□□□□ 0.39
SIRPA-204ENST00000622179 USP47Q96K76 1375 aa17.49■□□□□ 0.39
SIRPA-204ENST00000622179 URB2Q14146 1524 aaKnown RBP17.49■□□□□ 0.39
SIRPA-204ENST00000622179 MRC2Q9UBG0 1479 aa17.48■□□□□ 0.39
SIRPA-204ENST00000622179 KTN1Q86UP2 1357 aaKnown RBP17.48■□□□□ 0.39
SIRPA-204ENST00000622179 KANK1Q14678 1352 aa17.47■□□□□ 0.39
SIRPA-204ENST00000622179 NAIPQ13075 1403 aa17.47■□□□□ 0.39
SIRPA-204ENST00000622179 KIF7Q2M1P5 1343 aa17.47■□□□□ 0.39
SIRPA-204ENST00000622179 PRG4Q92954 1404 aaPredicted RBP17.46■□□□□ 0.39
SIRPA-204ENST00000622179 SPAG9O60271 1321 aaKnown RBP17.46■□□□□ 0.39
SIRPA-204ENST00000622179 CDK13Q14004 1512 aaKnown RBP17.46■□□□□ 0.39
SIRPA-204ENST00000622179 NBPF8Q3BBV2 869 aa17.46■□□□□ 0.39
SIRPA-204ENST00000622179 RALBP1Q15311 655 aa17.45■□□□□ 0.38
SIRPA-204ENST00000622179 EHBP1L1Q8N3D4 1523 aa17.45■□□□□ 0.38
SIRPA-204ENST00000622179 CCDC7Q96M83 1385 aa17.45■□□□□ 0.38
SIRPA-204ENST00000622179 SAFB2Q14151 953 aaKnown RBP eCLIP17.44■□□□□ 0.38
SIRPA-204ENST00000622179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.44■□□□□ 0.38
SIRPA-204ENST00000622179 MAP3K1Q13233 1512 aa17.44■□□□□ 0.38
SIRPA-204ENST00000622179 CCDC144AA2RUR9 1427 aa17.43■□□□□ 0.38
SIRPA-204ENST00000622179 ANKRD50Q9ULJ7 1429 aa17.43■□□□□ 0.38
SIRPA-204ENST00000622179 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
SIRPA-204ENST00000622179 KIF15Q9NS87 1388 aa17.43■□□□□ 0.38
SIRPA-204ENST00000622179 SNAPC4Q5SXM2 1469 aa17.42■□□□□ 0.38
SIRPA-204ENST00000622179 EPRSP07814 1512 aaKnown RBP17.41■□□□□ 0.38
SIRPA-204ENST00000622179 IFT140Q96RY7 1462 aa17.41■□□□□ 0.38
SIRPA-204ENST00000622179 PPM1GO15355 546 aaPredicted RBP17.41■□□□□ 0.38
SIRPA-204ENST00000622179 NUDCQ9Y266 331 aa17.41■□□□□ 0.38
SIRPA-204ENST00000622179 MIA2Q96PC5 1412 aa17.4■□□□□ 0.38
SIRPA-204ENST00000622179 CFAP53Q96M91 514 aa17.39■□□□□ 0.37
SIRPA-204ENST00000622179 NLRP13Q86W25 1043 aa17.39■□□□□ 0.37
SIRPA-204ENST00000622179 CUL7Q14999 1698 aa17.39■□□□□ 0.37
SIRPA-204ENST00000622179 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
SIRPA-204ENST00000622179 PANK3Q9H999 370 aa17.38■□□□□ 0.37
SIRPA-204ENST00000622179 SUPT6HQ7KZ85 1726 aaKnown RBP17.38■□□□□ 0.37
SIRPA-204ENST00000622179 POGKQ9P215 609 aa17.37■□□□□ 0.37
SIRPA-204ENST00000622179 ERICH6BQ5W0A0 696 aa17.36■□□□□ 0.37
SIRPA-204ENST00000622179 FRAT1Q92837 279 aaPredicted RBP17.36■□□□□ 0.37
SIRPA-204ENST00000622179 CNTLNQ9NXG0 1405 aa17.35■□□□□ 0.37
SIRPA-204ENST00000622179 RGS3P49796 1198 aa17.35■□□□□ 0.37
SIRPA-204ENST00000622179 CCDC184Q52MB2 194 aa17.35■□□□□ 0.37
SIRPA-204ENST00000622179 NUTM2DQ5VT03 806 aaPredicted RBP17.35■□□□□ 0.37
SIRPA-204ENST00000622179 HECW1Q76N89 1606 aa17.35■□□□□ 0.37
SIRPA-204ENST00000622179 STK26Q9P289 416 aa17.35■□□□□ 0.37
SIRPA-204ENST00000622179 ZBED9Q6R2W3 1325 aa17.35■□□□□ 0.37
SIRPA-204ENST00000622179 TROQ12816 1431 aaPredicted RBP17.35■□□□□ 0.37
SIRPA-204ENST00000622179 UPF2Q9HAU5 1272 aaKnown RBP17.34■□□□□ 0.37
SIRPA-204ENST00000622179 DAPK1P53355 1430 aa17.34■□□□□ 0.37
SIRPA-204ENST00000622179 IQGAP2Q13576 1575 aa17.34■□□□□ 0.37
SIRPA-204ENST00000622179 MYBBP1AQ9BQG0 1328 aaKnown RBP17.34■□□□□ 0.37
SIRPA-204ENST00000622179 MORC1Q86VD1 984 aa17.33■□□□□ 0.37
SIRPA-204ENST00000622179 KIAA0586Q9BVV6 1533 aa17.33■□□□□ 0.36
SIRPA-204ENST00000622179 MLECQ14165 292 aa17.33■□□□□ 0.36
SIRPA-204ENST00000622179 PTPRKQ15262 1439 aa17.32■□□□□ 0.36
SIRPA-204ENST00000622179 ZNF608Q9ULD9 1512 aaPredicted RBP17.32■□□□□ 0.36
SIRPA-204ENST00000622179 U2SURPO15042 1029 aaKnown RBP17.32■□□□□ 0.36
SIRPA-204ENST00000622179 SRPK2P78362 688 aaKnown RBP17.3■□□□□ 0.36
SIRPA-204ENST00000622179 C11orf95C9JLR9 678 aaPredicted RBP17.3■□□□□ 0.36
SIRPA-204ENST00000622179 MAPKBP1O60336 1514 aa17.3■□□□□ 0.36
SIRPA-204ENST00000622179 ARID4BQ4LE39 1312 aaPredicted RBP17.29■□□□□ 0.36
SIRPA-204ENST00000622179 CCDC146Q8IYE0 955 aa17.29■□□□□ 0.36
SIRPA-204ENST00000622179 AFAP1Q8N556 730 aa17.29■□□□□ 0.36
SIRPA-204ENST00000622179 PTPN23Q9H3S7 1636 aa17.29■□□□□ 0.36
SIRPA-204ENST00000622179 PLB1Q6P1J6 1458 aa17.28■□□□□ 0.36
SIRPA-204ENST00000622179 NBPF1Q3BBV0 1214 aa17.27■□□□□ 0.36
SIRPA-204ENST00000622179 TRAK1Q9UPV9 953 aa17.27■□□□□ 0.36
SIRPA-204ENST00000622179 NOP58Q9Y2X3 529 aaKnown RBP17.27■□□□□ 0.35
SIRPA-204ENST00000622179 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
SIRPA-204ENST00000622179 C9orf84Q5VXU9 1444 aa17.26■□□□□ 0.35
SIRPA-204ENST00000622179 KIAA1107Q9UPP5 1409 aa17.26■□□□□ 0.35
SIRPA-204ENST00000622179 WASHC2CQ9Y4E1 1318 aa17.26■□□□□ 0.35
SIRPA-204ENST00000622179 MAPK8IP3Q9UPT6 1336 aa17.25■□□□□ 0.35
SIRPA-204ENST00000622179 ABCC5O15440 1437 aa17.25■□□□□ 0.35
SIRPA-204ENST00000622179 SYNJ2O15056 1496 aa17.25■□□□□ 0.35
SIRPA-204ENST00000622179 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
SIRPA-204ENST00000622179 PLIN1O60240 522 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 530.5 ms