RNA–Protein interactions for RNA: ENST00000620552.4

AGRN-210, Transcript of agrin, humanhuman

TSL 5 BASIC

Gene AGRN, Length 7,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-210ENST00000620552 HDGFL2Q7Z4V5 671 aaPredicted RBP18.11■□□□□ 0.49
AGRN-210ENST00000620552 CCDC9Q9Y3X0 531 aaKnown RBP18.11■□□□□ 0.49
AGRN-210ENST00000620552 FOXD1Q16676 465 aa18.1■□□□□ 0.49
AGRN-210ENST00000620552 ABCC8Q09428 1581 aa18.1■□□□□ 0.49
AGRN-210ENST00000620552 CECR2Q9BXF3 1484 aa18.08■□□□□ 0.48
AGRN-210ENST00000620552 PKD2Q13563 968 aa18.05■□□□□ 0.48
AGRN-210ENST00000620552 SOGA1O94964 1423 aa18.04■□□□□ 0.48
AGRN-210ENST00000620552 ROCK2O75116 1388 aaKnown RBP18.04■□□□□ 0.48
AGRN-210ENST00000620552 PDS5BQ9NTI5 1447 aa18.04■□□□□ 0.48
AGRN-210ENST00000620552 APBB1O00213 710 aa18.04■□□□□ 0.48
AGRN-210ENST00000620552 SMARCA2P51531 1590 aa18.02■□□□□ 0.48
AGRN-210ENST00000620552 GOLGA6L6A8MZA4 724 aa18.02■□□□□ 0.48
AGRN-210ENST00000620552 NUTM2DQ5VT03 806 aaPredicted RBP18.01■□□□□ 0.47
AGRN-210ENST00000620552 MCCP23508 829 aa18.01■□□□□ 0.47
AGRN-210ENST00000620552 PPP4R2Q9NY27 417 aa18.01■□□□□ 0.47
AGRN-210ENST00000620552 TMX4Q9H1E5 349 aaPredicted RBP18■□□□□ 0.47
AGRN-210ENST00000620552 GOLGA6L4A6NEF3 574 aa17.99■□□□□ 0.47
AGRN-210ENST00000620552 SPRYD3Q8NCJ5 442 aa17.99■□□□□ 0.47
AGRN-210ENST00000620552 SETD5Q9C0A6 1442 aa17.99■□□□□ 0.47
AGRN-210ENST00000620552 B4GALNT3Q6L9W6 998 aa17.99■□□□□ 0.47
AGRN-210ENST00000620552 GNL2Q13823 731 aaKnown RBP17.98■□□□□ 0.47
AGRN-210ENST00000620552 CCDC88BA6NC98 1476 aa17.98■□□□□ 0.47
AGRN-210ENST00000620552 HSCBQ8IWL3 235 aa17.97■□□□□ 0.47
AGRN-210ENST00000620552 KTN1Q86UP2 1357 aaKnown RBP17.97■□□□□ 0.47
AGRN-210ENST00000620552 EID1Q9Y6B2 187 aa17.96■□□□□ 0.47
AGRN-210ENST00000620552 WIZO95785 1651 aa17.96■□□□□ 0.47
AGRN-210ENST00000620552 HSPA5P11021 654 aaKnown RBP17.96■□□□□ 0.47
AGRN-210ENST00000620552 CHMP3Q9Y3E7 222 aa17.96■□□□□ 0.46
AGRN-210ENST00000620552 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
AGRN-210ENST00000620552 U2AF1L5P0DN76 240 aaPredicted RBP17.95■□□□□ 0.46
AGRN-210ENST00000620552 U2AF1Q01081 240 aaKnown RBP eCLIP17.95■□□□□ 0.46
AGRN-210ENST00000620552 EFCAB2Q5VUJ9 269 aa17.95■□□□□ 0.46
AGRN-210ENST00000620552 HNRNPMP52272 730 aaKnown RBP eCLIP17.94■□□□□ 0.465e-6■■■■□ 20.7
AGRN-210ENST00000620552 NUP155O75694 1391 aa17.94■□□□□ 0.46
AGRN-210ENST00000620552 KIF3BO15066 747 aa17.94■□□□□ 0.46
AGRN-210ENST00000620552 AMER1Q5JTC6 1135 aaPredicted RBP17.93■□□□□ 0.46
AGRN-210ENST00000620552 KIAA1211Q6ZU35 1233 aa17.92■□□□□ 0.46
AGRN-210ENST00000620552 EIF3AQ14152 1382 aaKnown RBP17.9■□□□□ 0.46
AGRN-210ENST00000620552 NUTM2FA1L443 756 aa17.9■□□□□ 0.46
AGRN-210ENST00000620552 TAF7LQ5H9L4 462 aa17.9■□□□□ 0.46
AGRN-210ENST00000620552 G3V3G9 751 aa17.9■□□□□ 0.46
AGRN-210ENST00000620552 DCAF8Q5TAQ9 597 aa17.9■□□□□ 0.46
AGRN-210ENST00000620552 ITPRIPQ8IWB1 547 aa17.9■□□□□ 0.46
AGRN-210ENST00000620552 NGDNQ8NEJ9 315 aaKnown RBP17.9■□□□□ 0.46
AGRN-210ENST00000620552 IPO8O15397 1037 aaKnown RBP17.9■□□□□ 0.46
AGRN-210ENST00000620552 SPAG9O60271 1321 aaKnown RBP17.9■□□□□ 0.46
AGRN-210ENST00000620552 CALD1Q05682 793 aaKnown RBP17.9■□□□□ 0.46
AGRN-210ENST00000620552 ANKRD30AQ9BXX3 1397 aa17.9■□□□□ 0.46
AGRN-210ENST00000620552 WASHC2CQ9Y4E1 1318 aa17.9■□□□□ 0.46
AGRN-210ENST00000620552 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
AGRN-210ENST00000620552 MPHOSPH9Q99550 1183 aa17.89■□□□□ 0.45
AGRN-210ENST00000620552 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.88■□□□□ 0.45
AGRN-210ENST00000620552 GORABQ5T7V8 394 aa17.88■□□□□ 0.45
AGRN-210ENST00000620552 DRC7Q8IY82 874 aa17.88■□□□□ 0.45
AGRN-210ENST00000620552 LTV1Q96GA3 475 aaPredicted RBP17.88■□□□□ 0.45
AGRN-210ENST00000620552 FMN1Q68DA7 1419 aa17.87■□□□□ 0.45
AGRN-210ENST00000620552 KANK4Q5T7N3 995 aaPredicted RBP17.87■□□□□ 0.45
AGRN-210ENST00000620552 NRDCO43847 1150 aa17.87■□□□□ 0.45
AGRN-210ENST00000620552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.86■□□□□ 0.45
AGRN-210ENST00000620552 NOP58Q9Y2X3 529 aaKnown RBP17.86■□□□□ 0.45
AGRN-210ENST00000620552 NAP1L5Q96NT1 182 aaPredicted RBP17.85■□□□□ 0.45
AGRN-210ENST00000620552 AMPHP49418 695 aa17.84■□□□□ 0.45
AGRN-210ENST00000620552 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
AGRN-210ENST00000620552 CFAP44Q96MT7 982 aa17.83■□□□□ 0.44
AGRN-210ENST00000620552 STK31Q9BXU1 1019 aa17.83■□□□□ 0.44
AGRN-210ENST00000620552 TERF2IPQ9NYB0 399 aa17.82■□□□□ 0.44
AGRN-210ENST00000620552 VPS8Q8N3P4 1428 aa17.82■□□□□ 0.44
AGRN-210ENST00000620552 SLC4A10Q6U841 1118 aa17.81■□□□□ 0.44
AGRN-210ENST00000620552 GPATCH3Q96I76 525 aa17.81■□□□□ 0.44
AGRN-210ENST00000620552 CCDC146Q8IYE0 955 aa17.8■□□□□ 0.44
AGRN-210ENST00000620552 TRIM6-TRIM34B2RNG4 842 aa17.79■□□□□ 0.44
AGRN-210ENST00000620552 RAB3GAP2Q9H2M9 1393 aa17.79■□□□□ 0.44
AGRN-210ENST00000620552 CCDC18Q5T9S5 1454 aa17.78■□□□□ 0.44
AGRN-210ENST00000620552 RTN4Q9NQC3 1192 aaKnown RBP17.78■□□□□ 0.44
AGRN-210ENST00000620552 AEBP2Q6ZN18 517 aaPredicted RBP17.78■□□□□ 0.44
AGRN-210ENST00000620552 EVA1CP58658 441 aa17.77■□□□□ 0.44
AGRN-210ENST00000620552 HSP90B1P14625 803 aaKnown RBP17.77■□□□□ 0.44
AGRN-210ENST00000620552 SMC4Q9NTJ3 1288 aa17.77■□□□□ 0.44
AGRN-210ENST00000620552 RALBP1Q15311 655 aa17.77■□□□□ 0.43
AGRN-210ENST00000620552 FHOD3Q2V2M9 1422 aa17.76■□□□□ 0.43
AGRN-210ENST00000620552 TRAK1Q9UPV9 953 aa17.76■□□□□ 0.43
AGRN-210ENST00000620552 GTF2E1P29083 439 aaPredicted RBP17.76■□□□□ 0.43
AGRN-210ENST00000620552 RCAN3Q9UKA8 241 aa17.75■□□□□ 0.43
AGRN-210ENST00000620552 TOP2AP11388 1531 aaKnown RBP17.75■□□□□ 0.43
AGRN-210ENST00000620552 FRAT2O75474 233 aaPredicted RBP17.75■□□□□ 0.43
AGRN-210ENST00000620552 ERICH6BQ5W0A0 696 aa17.74■□□□□ 0.43
AGRN-210ENST00000620552 TIMELESSQ9UNS1 1208 aa17.74■□□□□ 0.43
AGRN-210ENST00000620552 CHAF1AQ13111 956 aaPredicted RBP17.74■□□□□ 0.43
AGRN-210ENST00000620552 RWDD1Q9H446 243 aaPredicted RBP17.74■□□□□ 0.43
AGRN-210ENST00000620552 KIAA2012Q0VF49 1180 aa17.74■□□□□ 0.43
AGRN-210ENST00000620552 CCER2I3L3R5 266 aa17.73■□□□□ 0.43
AGRN-210ENST00000620552 CYB5RLQ6IPT4 315 aa17.72■□□□□ 0.43
AGRN-210ENST00000620552 CHMP4AQ9BY43 222 aa17.72■□□□□ 0.43
AGRN-210ENST00000620552 RAPGEF2Q9Y4G8 1499 aa17.71■□□□□ 0.43
AGRN-210ENST00000620552 MSH5O43196 834 aa17.71■□□□□ 0.43
AGRN-210ENST00000620552 MSNP26038 577 aaKnown RBP17.71■□□□□ 0.43
AGRN-210ENST00000620552 JPH4Q96JJ6 628 aa17.71■□□□□ 0.43
AGRN-210ENST00000620552 PRM3Q9NNZ6 103 aa17.7■□□□□ 0.42
AGRN-210ENST00000620552 MEX3CQ5U5Q3 659 aaKnown RBP17.7■□□□□ 0.42
AGRN-210ENST00000620552 PMFBP1Q8TBY8 1022 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms