RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 RAPGEF6Q8TEU7 1601 aa18.3■□□□□ 0.52
SKP2-209ENST00000620197 HSPA5P11021 654 aaKnown RBP18.3■□□□□ 0.52
SKP2-209ENST00000620197 ABCC5O15440 1437 aa18.29■□□□□ 0.52
SKP2-209ENST00000620197 NUP153P49790 1475 aaKnown RBP18.28■□□□□ 0.52
SKP2-209ENST00000620197 CCDC7Q96M83 1385 aa18.27■□□□□ 0.52
SKP2-209ENST00000620197 ITSN2Q9NZM3 1697 aa18.27■□□□□ 0.52
SKP2-209ENST00000620197 ERICH6BQ5W0A0 696 aa18.26■□□□□ 0.51
SKP2-209ENST00000620197 PZPP20742 1482 aa18.26■□□□□ 0.51
SKP2-209ENST00000620197 BCORL1Q5H9F3 1711 aa18.25■□□□□ 0.51
SKP2-209ENST00000620197 KIF14Q15058 1648 aa18.25■□□□□ 0.51
SKP2-209ENST00000620197 NEFLP07196 543 aa18.25■□□□□ 0.51
SKP2-209ENST00000620197 MPHOSPH9Q99550 1183 aa18.25■□□□□ 0.51
SKP2-209ENST00000620197 ADGRL2O95490 1459 aa18.24■□□□□ 0.51
SKP2-209ENST00000620197 SLC24A1O60721 1099 aa18.24■□□□□ 0.51
SKP2-209ENST00000620197 C11orf95C9JLR9 678 aaPredicted RBP18.24■□□□□ 0.51
SKP2-209ENST00000620197 KDM5CP41229 1560 aa18.22■□□□□ 0.51
SKP2-209ENST00000620197 KIAA0586Q9BVV6 1533 aa18.22■□□□□ 0.51
SKP2-209ENST00000620197 MRC2Q9UBG0 1479 aa18.22■□□□□ 0.51
SKP2-209ENST00000620197 RRP7BPQ9NSQ0 103 aa18.21■□□□□ 0.51
SKP2-209ENST00000620197 FANCIQ9NVI1 1328 aa18.21■□□□□ 0.51
SKP2-209ENST00000620197 BCL11AQ9H165 835 aa18.2■□□□□ 0.5
SKP2-209ENST00000620197 EIF4G2P78344 907 aaKnown RBP eCLIP18.2■□□□□ 0.5
SKP2-209ENST00000620197 L3MBTL2Q969R5 705 aa18.2■□□□□ 0.5
SKP2-209ENST00000620197 CCDC184Q52MB2 194 aa18.18■□□□□ 0.5
SKP2-209ENST00000620197 MSH5O43196 834 aa18.18■□□□□ 0.5
SKP2-209ENST00000620197 PRKRIP1Q9H875 184 aaPredicted RBP18.18■□□□□ 0.5
SKP2-209ENST00000620197 E9PCH4 1651 aa18.18■□□□□ 0.5
SKP2-209ENST00000620197 NBPF8Q3BBV2 869 aa18.17■□□□□ 0.5
SKP2-209ENST00000620197 CDC42BPAQ5VT25 1732 aa18.17■□□□□ 0.5
SKP2-209ENST00000620197 DHX29Q7Z478 1369 aaKnown RBP18.16■□□□□ 0.5
SKP2-209ENST00000620197 CAMSAP2Q08AD1 1489 aa18.16■□□□□ 0.5
SKP2-209ENST00000620197 IFT140Q96RY7 1462 aa18.16■□□□□ 0.5
SKP2-209ENST00000620197 ZBED9Q6R2W3 1325 aa18.15■□□□□ 0.5
SKP2-209ENST00000620197 HNRNPUQ00839 825 aaKnown RBP eCLIP18.15■□□□□ 0.5
SKP2-209ENST00000620197 KDM5DQ9BY66 1539 aa18.15■□□□□ 0.5
SKP2-209ENST00000620197 EIF4G3O43432 1585 aaKnown RBP18.14■□□□□ 0.49
SKP2-209ENST00000620197 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
SKP2-209ENST00000620197 UHRF1BP1Q6BDS2 1440 aa18.12■□□□□ 0.49
SKP2-209ENST00000620197 GRIN2AQ12879 1464 aa18.12■□□□□ 0.49
SKP2-209ENST00000620197 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
SKP2-209ENST00000620197 KIF7Q2M1P5 1343 aa18.12■□□□□ 0.49
SKP2-209ENST00000620197 DNAJC5BQ9UF47 199 aa18.11■□□□□ 0.49
SKP2-209ENST00000620197 GPATCH8Q9UKJ3 1502 aaKnown RBP18.1■□□□□ 0.49
SKP2-209ENST00000620197 CEP170Q5SW79 1584 aa18.1■□□□□ 0.49
SKP2-209ENST00000620197 TROQ12816 1431 aaPredicted RBP18.1■□□□□ 0.49
SKP2-209ENST00000620197 ARHGEF12Q9NZN5 1544 aa18.09■□□□□ 0.49
SKP2-209ENST00000620197 SHANK2Q9UPX8 1470 aa18.08■□□□□ 0.49
SKP2-209ENST00000620197 RNF123Q5XPI4 1314 aa18.08■□□□□ 0.49
SKP2-209ENST00000620197 SMG6Q86US8 1419 aaKnown RBP18.08■□□□□ 0.48
SKP2-209ENST00000620197 KIAA1107Q9UPP5 1409 aa18.08■□□□□ 0.48
SKP2-209ENST00000620197 RALGAPBQ86X10 1494 aa18.06■□□□□ 0.48
SKP2-209ENST00000620197 FOXD1Q16676 465 aa18.06■□□□□ 0.48
SKP2-209ENST00000620197 PPP4R2Q9NY27 417 aa18.06■□□□□ 0.48
SKP2-209ENST00000620197 ZNF644Q9H582 1327 aaPredicted RBP18.04■□□□□ 0.48
SKP2-209ENST00000620197 ARID4BQ4LE39 1312 aaPredicted RBP18.03■□□□□ 0.48
SKP2-209ENST00000620197 ABCA8O94911 1581 aa18.03■□□□□ 0.48
SKP2-209ENST00000620197 ABCC10Q5T3U5 1492 aa18.03■□□□□ 0.48
SKP2-209ENST00000620197 PTPRGP23470 1445 aa18.02■□□□□ 0.47
SKP2-209ENST00000620197 PRG4Q92954 1404 aaPredicted RBP18.02■□□□□ 0.47
SKP2-209ENST00000620197 MAGI1Q96QZ7 1491 aaPredicted RBP18.01■□□□□ 0.47
SKP2-209ENST00000620197 ARHGEF5Q12774 1597 aa18■□□□□ 0.47
SKP2-209ENST00000620197 CDK11AQ9UQ88 783 aaPredicted RBP17.97■□□□□ 0.47
SKP2-209ENST00000620197 LAMC1P11047 1609 aa17.97■□□□□ 0.47
SKP2-209ENST00000620197 PLB1Q6P1J6 1458 aa17.97■□□□□ 0.47
SKP2-209ENST00000620197 IRX6P78412 446 aaPredicted RBP17.96■□□□□ 0.47
SKP2-209ENST00000620197 TRPM1Q7Z4N2 1603 aa17.96■□□□□ 0.47
SKP2-209ENST00000620197 NUP160Q12769 1436 aa17.96■□□□□ 0.47
SKP2-209ENST00000620197 USP47Q96K76 1375 aa17.96■□□□□ 0.47
SKP2-209ENST00000620197 MRS2Q9HD23 443 aa17.95■□□□□ 0.46
SKP2-209ENST00000620197 LRPPRCP42704 1394 aaKnown RBP17.95■□□□□ 0.46
SKP2-209ENST00000620197 SYNJ2O15056 1496 aa17.94■□□□□ 0.46
SKP2-209ENST00000620197 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
SKP2-209ENST00000620197 CDC42BPBQ9Y5S2 1711 aa17.91■□□□□ 0.46
SKP2-209ENST00000620197 ROCK2O75116 1388 aaKnown RBP17.91■□□□□ 0.46
SKP2-209ENST00000620197 ANKRD50Q9ULJ7 1429 aa17.9■□□□□ 0.46
SKP2-209ENST00000620197 UNC13BO14795 1591 aa17.9■□□□□ 0.46
SKP2-209ENST00000620197 PREX2Q70Z35 1606 aa17.89■□□□□ 0.46
SKP2-209ENST00000620197 ANKRD30AQ9BXX3 1397 aa17.89■□□□□ 0.45
SKP2-209ENST00000620197 FAM9BQ8IZU0 186 aa17.89■□□□□ 0.45
SKP2-209ENST00000620197 KTN1Q86UP2 1357 aaKnown RBP17.88■□□□□ 0.45
SKP2-209ENST00000620197 MAST1Q9Y2H9 1570 aa17.88■□□□□ 0.45
SKP2-209ENST00000620197 ZMYM4Q5VZL5 1548 aa17.87■□□□□ 0.45
SKP2-209ENST00000620197 MYO5CQ9NQX4 1742 aa17.87■□□□□ 0.45
SKP2-209ENST00000620197 C9orf84Q5VXU9 1444 aa17.86■□□□□ 0.45
SKP2-209ENST00000620197 SAMD9LQ8IVG5 1584 aa17.86■□□□□ 0.45
SKP2-209ENST00000620197 PNISRQ8TF01 805 aaKnown RBP17.86■□□□□ 0.45
SKP2-209ENST00000620197 NUDCQ9Y266 331 aa17.85■□□□□ 0.45
SKP2-209ENST00000620197 ATP10BO94823 1461 aa17.84■□□□□ 0.45
SKP2-209ENST00000620197 B4GALNT3Q6L9W6 998 aa17.83■□□□□ 0.44
SKP2-209ENST00000620197 CFDP1Q9UEE9 299 aaPredicted RBP17.82■□□□□ 0.44
SKP2-209ENST00000620197 RNF17Q9BXT8 1623 aaKnown RBP17.82■□□□□ 0.44
SKP2-209ENST00000620197 PRDM15P57071 1507 aaPredicted RBP17.82■□□□□ 0.44
SKP2-209ENST00000620197 FAM135AQ9P2D6 1515 aa17.82■□□□□ 0.44
SKP2-209ENST00000620197 ARID3CA6NKF2 412 aa17.82■□□□□ 0.44
SKP2-209ENST00000620197 IQGAP3Q86VI3 1631 aa17.81■□□□□ 0.44
SKP2-209ENST00000620197 BRD4O60885 1362 aaPredicted RBP17.8■□□□□ 0.44
SKP2-209ENST00000620197 INSRP06213 1382 aa17.8■□□□□ 0.44
SKP2-209ENST00000620197 PLXNC1O60486 1568 aa17.8■□□□□ 0.44
SKP2-209ENST00000620197 PKD2Q13563 968 aa17.8■□□□□ 0.44
SKP2-209ENST00000620197 KIF15Q9NS87 1388 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms