RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 RBM33Q96EV2 1170 aaKnown RBP5.96□□□□□ -1.45
CHL1-216ENST00000620033 NAP1L2Q9ULW6 460 aaPredicted RBP5.96□□□□□ -1.45
CHL1-216ENST00000620033 RAD21O60216 631 aa5.96□□□□□ -1.46
CHL1-216ENST00000620033 TOM1O60784 492 aa5.96□□□□□ -1.46
CHL1-216ENST00000620033 TONSLQ96HA7 1378 aa5.96□□□□□ -1.46
CHL1-216ENST00000620033 AMPHP49418 695 aa5.95□□□□□ -1.46
CHL1-216ENST00000620033 NBPF8Q3BBV2 869 aa5.95□□□□□ -1.46
CHL1-216ENST00000620033 NBPF14Q5TI25 921 aa5.95□□□□□ -1.46
CHL1-216ENST00000620033 TNNT2P45379 298 aaPredicted RBP5.95□□□□□ -1.46
CHL1-216ENST00000620033 TTLL12Q14166 644 aaPredicted RBP5.95□□□□□ -1.46
CHL1-216ENST00000620033 STRN4Q9NRL3 753 aa5.94□□□□□ -1.46
CHL1-216ENST00000620033 GORABQ5T7V8 394 aa5.94□□□□□ -1.46
CHL1-216ENST00000620033 HNRNPMP52272 730 aaKnown RBP eCLIP5.94□□□□□ -1.46
CHL1-216ENST00000620033 C1orf141Q5JVX7 400 aa5.94□□□□□ -1.46
CHL1-216ENST00000620033 KIF3BO15066 747 aa5.94□□□□□ -1.46
CHL1-216ENST00000620033 CLEC11AQ9Y240 323 aa5.94□□□□□ -1.46
CHL1-216ENST00000620033 U2SURPO15042 1029 aaKnown RBP5.93□□□□□ -1.46
CHL1-216ENST00000620033 NGLY1Q96IV0 654 aa5.93□□□□□ -1.46
CHL1-216ENST00000620033 USP35Q9P2H5 1018 aa5.93□□□□□ -1.46
CHL1-216ENST00000620033 SALL2Q9Y467 1007 aaPredicted RBP5.93□□□□□ -1.46
CHL1-216ENST00000620033 NBR1Q14596 966 aa5.93□□□□□ -1.46
CHL1-216ENST00000620033 WDR70Q9NW82 654 aa5.93□□□□□ -1.46
CHL1-216ENST00000620033 SOGA1O94964 1423 aa5.93□□□□□ -1.46
CHL1-216ENST00000620033 AMOTL1Q8IY63 956 aa5.93□□□□□ -1.46
CHL1-216ENST00000620033 SAMD1Q6SPF0 538 aaPredicted RBP5.92□□□□□ -1.46
CHL1-216ENST00000620033 AIDAQ96BJ3 306 aa5.92□□□□□ -1.46
CHL1-216ENST00000620033 TMEM87AQ8NBN3 555 aa5.92□□□□□ -1.46
CHL1-216ENST00000620033 DISP3Q9P2K9 1392 aa5.92□□□□□ -1.46
CHL1-216ENST00000620033 FGD1P98174 961 aa5.92□□□□□ -1.46
CHL1-216ENST00000620033 SPAG9O60271 1321 aaKnown RBP5.92□□□□□ -1.46
CHL1-216ENST00000620033 POLD1P28340 1107 aa5.92□□□□□ -1.46
CHL1-216ENST00000620033 CASC1Q6TDU7 716 aa5.91□□□□□ -1.46
CHL1-216ENST00000620033 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.91□□□□□ -1.46
CHL1-216ENST00000620033 KNSTRNQ9Y448 316 aa5.91□□□□□ -1.46
CHL1-216ENST00000620033 KIF27Q86VH2 1401 aa5.91□□□□□ -1.46
CHL1-216ENST00000620033 VPS37DQ86XT2 251 aa5.91□□□□□ -1.46
CHL1-216ENST00000620033 ADAMTS2O95450 1211 aa5.9□□□□□ -1.46
CHL1-216ENST00000620033 TTC5Q8N0Z6 440 aa5.9□□□□□ -1.46
CHL1-216ENST00000620033 ZRSR1Q15695 479 aaKnown RBP5.9□□□□□ -1.46
CHL1-216ENST00000620033 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.9□□□□□ -1.46
CHL1-216ENST00000620033 LOC105371045A0A1W2PR82 267 aa5.9□□□□□ -1.46
CHL1-216ENST00000620033 BCL11BQ9C0K0 894 aaPredicted RBP5.9□□□□□ -1.46
CHL1-216ENST00000620033 ANKLE2Q86XL3 938 aa5.9□□□□□ -1.47
CHL1-216ENST00000620033 MYCNP04198 464 aaPredicted RBP5.9□□□□□ -1.47
CHL1-216ENST00000620033 UPF2Q9HAU5 1272 aaKnown RBP5.9□□□□□ -1.47
CHL1-216ENST00000620033 WRNQ14191 1432 aaPredicted RBP eCLIP5.89□□□□□ -1.47
CHL1-216ENST00000620033 WWC2Q6AWC2 1192 aa5.89□□□□□ -1.47
CHL1-216ENST00000620033 ZNF710Q8N1W2 664 aa5.89□□□□□ -1.47
CHL1-216ENST00000620033 ZRANB1Q9UGI0 708 aa5.89□□□□□ -1.47
CHL1-216ENST00000620033 ANP32EQ9BTT0 268 aa5.89□□□□□ -1.47
CHL1-216ENST00000620033 ANO8Q9HCE9 1232 aaPredicted RBP5.89□□□□□ -1.47
CHL1-216ENST00000620033 PPM1FP49593 454 aaPredicted RBP5.88□□□□□ -1.47
CHL1-216ENST00000620033 ESCO1Q5FWF5 840 aa5.88□□□□□ -1.47
CHL1-216ENST00000620033 DDRGK1Q96HY6 314 aa5.88□□□□□ -1.47
CHL1-216ENST00000620033 CRBNQ96SW2 442 aa5.88□□□□□ -1.47
CHL1-216ENST00000620033 RFX1P22670 979 aa5.88□□□□□ -1.47
CHL1-216ENST00000620033 ACIN1Q9UKV3 1341 aaKnown RBP5.88□□□□□ -1.47
CHL1-216ENST00000620033 PRDM2Q13029 1718 aa5.88□□□□□ -1.47
CHL1-216ENST00000620033 MARCH6O60337 910 aa5.87□□□□□ -1.47
CHL1-216ENST00000620033 THEMISQ8N1K5 641 aaPredicted RBP5.87□□□□□ -1.47
CHL1-216ENST00000620033 CUX2O14529 1486 aa5.87□□□□□ -1.47
CHL1-216ENST00000620033 ZCCHC6Q5VYS8 1495 aaKnown RBP5.87□□□□□ -1.47
CHL1-216ENST00000620033 JPH4Q96JJ6 628 aa5.87□□□□□ -1.47
CHL1-216ENST00000620033 GNL2Q13823 731 aaKnown RBP5.87□□□□□ -1.47
CHL1-216ENST00000620033 LMTK3Q96Q04 1460 aa5.86□□□□□ -1.47
CHL1-216ENST00000620033 GPR162Q16538 588 aa5.86□□□□□ -1.47
CHL1-216ENST00000620033 PTPRGP23470 1445 aa5.86□□□□□ -1.47
CHL1-216ENST00000620033 TDRD9Q8NDG6 1382 aaKnown RBP5.86□□□□□ -1.47
CHL1-216ENST00000620033 GPRASP1Q5JY77 1395 aa5.86□□□□□ -1.47
CHL1-216ENST00000620033 PPP4R2Q9NY27 417 aa5.85□□□□□ -1.47
CHL1-216ENST00000620033 RBM5P52756 815 aaKnown RBP eCLIP5.85□□□□□ -1.47
CHL1-216ENST00000620033 FTSJ3Q8IY81 847 aaKnown RBP5.85□□□□□ -1.47
CHL1-216ENST00000620033 CHMP4AQ9BY43 222 aa5.85□□□□□ -1.47
CHL1-216ENST00000620033 NGEFQ8N5V2 710 aa5.84□□□□□ -1.47
CHL1-216ENST00000620033 PLCD3Q8N3E9 789 aa5.84□□□□□ -1.47
CHL1-216ENST00000620033 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.84□□□□□ -1.47
CHL1-216ENST00000620033 BIN2Q9UBW5 565 aaPredicted RBP5.84□□□□□ -1.47
CHL1-216ENST00000620033 ANP32BQ92688 251 aaKnown RBP5.84□□□□□ -1.47
CHL1-216ENST00000620033 C8orf37Q96NL8 207 aa5.84□□□□□ -1.47
CHL1-216ENST00000620033 TXNDC2Q86VQ3 553 aa5.84□□□□□ -1.48
CHL1-216ENST00000620033 RBM42Q9BTD8 480 aaKnown RBP5.84□□□□□ -1.48
CHL1-216ENST00000620033 TOM1L2Q6ZVM7 507 aa5.83□□□□□ -1.48
CHL1-216ENST00000620033 PPP6R1Q9UPN7 881 aa5.83□□□□□ -1.48
CHL1-216ENST00000620033 RTL5Q5HYW3 569 aaPredicted RBP5.83□□□□□ -1.48
CHL1-216ENST00000620033 SPRYD3Q8NCJ5 442 aa5.83□□□□□ -1.48
CHL1-216ENST00000620033 IBSPP21815 317 aaPredicted RBP5.83□□□□□ -1.48
CHL1-216ENST00000620033 CA8P35219 290 aa5.83□□□□□ -1.48
CHL1-216ENST00000620033 TMEM132AQ24JP5 1023 aa5.83□□□□□ -1.48
CHL1-216ENST00000620033 NLRP2Q9NX02 1062 aa5.83□□□□□ -1.48
CHL1-216ENST00000620033 AMER1Q5JTC6 1135 aaPredicted RBP5.83□□□□□ -1.48
CHL1-216ENST00000620033 RAPGEF4Q8WZA2 1011 aa5.83□□□□□ -1.48
CHL1-216ENST00000620033 MORC1Q86VD1 984 aa5.83□□□□□ -1.48
CHL1-216ENST00000620033 CARD11Q9BXL7 1154 aa5.83□□□□□ -1.48
CHL1-216ENST00000620033 CAPN15O75808 1086 aa5.82□□□□□ -1.48
CHL1-216ENST00000620033 SLC4A3P48751 1232 aa5.82□□□□□ -1.48
CHL1-216ENST00000620033 MINK1Q8N4C8 1332 aaPredicted RBP5.82□□□□□ -1.48
CHL1-216ENST00000620033 TOMM22Q9NS69 142 aa5.82□□□□□ -1.48
CHL1-216ENST00000620033 NCLP19338 710 aaKnown RBP5.82□□□□□ -1.48
CHL1-216ENST00000620033 TERF2IPQ9NYB0 399 aa5.82□□□□□ -1.48
CHL1-216ENST00000620033 TPRNQ4KMQ1 711 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms