RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
CUL4A-212ENST00000617546 SKOR2Q2VWA4 1001 aaPredicted RBP13.03□□□□□ -0.32
CUL4A-212ENST00000617546 ABCC8Q09428 1581 aa13.03□□□□□ -0.32
CUL4A-212ENST00000617546 MCCP23508 829 aa13.03□□□□□ -0.32
CUL4A-212ENST00000617546 PDE4AP27815 886 aa13.03□□□□□ -0.32
CUL4A-212ENST00000617546 HAP1P54257 671 aaPredicted RBP13.02□□□□□ -0.32
CUL4A-212ENST00000617546 KANK4Q5T7N3 995 aaPredicted RBP13.02□□□□□ -0.32
CUL4A-212ENST00000617546 FAM161AQ3B820 660 aa13.02□□□□□ -0.32
CUL4A-212ENST00000617546 KIF15Q9NS87 1388 aa13.02□□□□□ -0.33
CUL4A-212ENST00000617546 FRAT1Q92837 279 aaPredicted RBP13.01□□□□□ -0.33
CUL4A-212ENST00000617546 NLRP13Q86W25 1043 aa13.01□□□□□ -0.33
CUL4A-212ENST00000617546 IPO8O15397 1037 aaKnown RBP13□□□□□ -0.33
CUL4A-212ENST00000617546 CC2D1BQ5T0F9 858 aaKnown RBP12.98□□□□□ -0.33
CUL4A-212ENST00000617546 MYBBP1AQ9BQG0 1328 aaKnown RBP12.97□□□□□ -0.33
CUL4A-212ENST00000617546 STAG3Q9UJ98 1225 aa12.97□□□□□ -0.33
CUL4A-212ENST00000617546 RRP1P56182 461 aaKnown RBP12.97□□□□□ -0.33
CUL4A-212ENST00000617546 MPHOSPH9Q99550 1183 aa12.97□□□□□ -0.33
CUL4A-212ENST00000617546 NGEFQ8N5V2 710 aa12.96□□□□□ -0.33
CUL4A-212ENST00000617546 CUX2O14529 1486 aa12.96□□□□□ -0.33
CUL4A-212ENST00000617546 PRKRIP1Q9H875 184 aaPredicted RBP12.96□□□□□ -0.33
CUL4A-212ENST00000617546 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
CUL4A-212ENST00000617546 PHF14O94880 888 aa12.95□□□□□ -0.34
CUL4A-212ENST00000617546 AAMPQ13685 434 aa12.94□□□□□ -0.34
CUL4A-212ENST00000617546 MAP7D2Q96T17 732 aa12.94□□□□□ -0.34
CUL4A-212ENST00000617546 SMARCA2P51531 1590 aa12.94□□□□□ -0.34
CUL4A-212ENST00000617546 RGL3Q3MIN7 710 aa12.94□□□□□ -0.34
CUL4A-212ENST00000617546 MTERF4Q7Z6M4 381 aaKnown RBP12.94□□□□□ -0.34
CUL4A-212ENST00000617546 CSPP1Q1MSJ5 1256 aa12.93□□□□□ -0.34
CUL4A-212ENST00000617546 SLKQ9H2G2 1235 aaPredicted RBP12.93□□□□□ -0.34
CUL4A-212ENST00000617546 CALD1Q05682 793 aaKnown RBP12.93□□□□□ -0.34
CUL4A-212ENST00000617546 EIF3AQ14152 1382 aaKnown RBP12.92□□□□□ -0.34
CUL4A-212ENST00000617546 GOLGA6L4A6NEF3 574 aa12.92□□□□□ -0.34
CUL4A-212ENST00000617546 DCAF11Q8TEB1 546 aa12.92□□□□□ -0.34
CUL4A-212ENST00000617546 PLCB2Q00722 1185 aa12.91□□□□□ -0.34
CUL4A-212ENST00000617546 VSIG10Q8N0Z9 540 aa12.91□□□□□ -0.34
CUL4A-212ENST00000617546 HTATSF1O43719 755 aaKnown RBP12.9□□□□□ -0.34
CUL4A-212ENST00000617546 FAM43AQ8N2R8 423 aa12.9□□□□□ -0.34
CUL4A-212ENST00000617546 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.9□□□□□ -0.34
CUL4A-212ENST00000617546 CGNL1Q0VF96 1302 aa12.89□□□□□ -0.35
CUL4A-212ENST00000617546 ESF1Q9H501 851 aaKnown RBP12.89□□□□□ -0.35
CUL4A-212ENST00000617546 CNTLNQ9NXG0 1405 aa12.89□□□□□ -0.35
CUL4A-212ENST00000617546 RAPGEF2Q9Y4G8 1499 aa12.89□□□□□ -0.35
CUL4A-212ENST00000617546 GZF1Q9H116 711 aaPredicted RBP12.89□□□□□ -0.35
CUL4A-212ENST00000617546 WIZO95785 1651 aa12.88□□□□□ -0.35
CUL4A-212ENST00000617546 CHMP7Q8WUX9 453 aaPredicted RBP12.88□□□□□ -0.35
CUL4A-212ENST00000617546 ANKRD30AQ9BXX3 1397 aa12.88□□□□□ -0.35
CUL4A-212ENST00000617546 L3MBTL2Q969R5 705 aa12.88□□□□□ -0.35
CUL4A-212ENST00000617546 KCNH8Q96L42 1107 aa12.88□□□□□ -0.35
CUL4A-212ENST00000617546 TPM2P07951 284 aa12.87□□□□□ -0.35
CUL4A-212ENST00000617546 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
CUL4A-212ENST00000617546 DRC7Q8IY82 874 aa12.87□□□□□ -0.35
CUL4A-212ENST00000617546 ISY1Q9ULR0 285 aaKnown RBP12.87□□□□□ -0.35
CUL4A-212ENST00000617546 CENPJQ9HC77 1338 aaPredicted RBP12.86□□□□□ -0.35
CUL4A-212ENST00000617546 CCDC18Q5T9S5 1454 aa12.86□□□□□ -0.35
CUL4A-212ENST00000617546 CHMP5Q9NZZ3 219 aa12.86□□□□□ -0.35
CUL4A-212ENST00000617546 MORC1Q86VD1 984 aa12.86□□□□□ -0.35
CUL4A-212ENST00000617546 PKD2Q13563 968 aa12.85□□□□□ -0.35
CUL4A-212ENST00000617546 KIF21BO75037 1637 aa12.85□□□□□ -0.35
CUL4A-212ENST00000617546 KANK1Q14678 1352 aa12.85□□□□□ -0.35
CUL4A-212ENST00000617546 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
CUL4A-212ENST00000617546 SPRYD3Q8NCJ5 442 aa12.85□□□□□ -0.35
CUL4A-212ENST00000617546 SENP3-EIF4A1A0A087X0R7 540 aa12.84□□□□□ -0.35
CUL4A-212ENST00000617546 MRE11P49959 708 aa12.84□□□□□ -0.35
CUL4A-212ENST00000617546 EXOC6Q8TAG9 804 aa12.83□□□□□ -0.36
CUL4A-212ENST00000617546 RRBP1Q9P2E9 1410 aaKnown RBP12.83□□□□□ -0.36
CUL4A-212ENST00000617546 NFKBIBQ15653 356 aa12.83□□□□□ -0.36
CUL4A-212ENST00000617546 MFAP1P55081 439 aaKnown RBP12.83□□□□□ -0.36
CUL4A-212ENST00000617546 E9PSI1 815 aa12.82□□□□□ -0.36
CUL4A-212ENST00000617546 ST18O60284 1047 aa12.82□□□□□ -0.36
CUL4A-212ENST00000617546 UACAQ9BZF9 1416 aa12.82□□□□□ -0.36
CUL4A-212ENST00000617546 TNNT3P45378 269 aaPredicted RBP12.82□□□□□ -0.36
CUL4A-212ENST00000617546 CCDC7Q96M83 1385 aa12.81□□□□□ -0.36
CUL4A-212ENST00000617546 TPM4P67936 248 aa12.81□□□□□ -0.36
CUL4A-212ENST00000617546 CUX1P39880 1505 aa12.8□□□□□ -0.36
CUL4A-212ENST00000617546 CHMP4AQ9BY43 222 aa12.8□□□□□ -0.36
CUL4A-212ENST00000617546 BRD4O60885 1362 aaPredicted RBP12.79□□□□□ -0.36
CUL4A-212ENST00000617546 ITPRIPQ8IWB1 547 aa12.79□□□□□ -0.36
CUL4A-212ENST00000617546 CRBNQ96SW2 442 aa12.79□□□□□ -0.36
CUL4A-212ENST00000617546 KIF16BQ96L93 1317 aa12.79□□□□□ -0.36
CUL4A-212ENST00000617546 U2SURPO15042 1029 aaKnown RBP12.78□□□□□ -0.36
CUL4A-212ENST00000617546 RSPH4AQ5TD94 716 aa12.78□□□□□ -0.36
CUL4A-212ENST00000617546 KCNJ4P48050 445 aa12.78□□□□□ -0.36
CUL4A-212ENST00000617546 MIA2Q96PC5 1412 aa12.77□□□□□ -0.36
CUL4A-212ENST00000617546 KIAA1211Q6ZU35 1233 aa12.77□□□□□ -0.36
CUL4A-212ENST00000617546 SMG6Q86US8 1419 aaKnown RBP12.77□□□□□ -0.36
CUL4A-212ENST00000617546 DDX49Q9Y6V7 483 aaKnown RBP12.77□□□□□ -0.37
CUL4A-212ENST00000617546 HMMRO75330 724 aa12.77□□□□□ -0.37
CUL4A-212ENST00000617546 NUP155O75694 1391 aa12.76□□□□□ -0.37
CUL4A-212ENST00000617546 ERICH3Q5RHP9 1530 aa12.76□□□□□ -0.37
CUL4A-212ENST00000617546 ATP6V1DQ9Y5K8 247 aa12.76□□□□□ -0.37
CUL4A-212ENST00000617546 USP47Q96K76 1375 aa12.76□□□□□ -0.37
CUL4A-212ENST00000617546 PKNOX2Q96KN3 472 aa12.76□□□□□ -0.37
CUL4A-212ENST00000617546 PRKCSHP14314 528 aaPredicted RBP12.75□□□□□ -0.37
CUL4A-212ENST00000617546 EIF4G1Q04637 1599 aaKnown RBP12.75□□□□□ -0.37
CUL4A-212ENST00000617546 RRP9O43818 475 aaKnown RBP12.75□□□□□ -0.37
CUL4A-212ENST00000617546 FGD1P98174 961 aa12.75□□□□□ -0.37
CUL4A-212ENST00000617546 SMARCA4P51532 1647 aa12.75□□□□□ -0.37
CUL4A-212ENST00000617546 NUCB2P80303 420 aa12.74□□□□□ -0.37
CUL4A-212ENST00000617546 SMC4Q9NTJ3 1288 aa12.74□□□□□ -0.37
CUL4A-212ENST00000617546 OS9Q13438 667 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms