RNA–Protein interactions for RNA: ENST00000617489.1

MALAT1-210, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 318 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-210ENST00000617489 NLRP6P59044 892 aa11.28□□□□□ -0.6
MALAT1-210ENST00000617489 BCL11BQ9C0K0 894 aaPredicted RBP11.28□□□□□ -0.6
MALAT1-210ENST00000617489 STK24Q9Y6E0 443 aa11.28□□□□□ -0.6
MALAT1-210ENST00000617489 VARS2Q5ST30 1063 aaKnown RBP11.25□□□□□ -0.61
MALAT1-210ENST00000617489 ECM2O94769 699 aaPredicted RBP11.23□□□□□ -0.61
MALAT1-210ENST00000617489 ZSWIM6Q9HCJ5 1215 aa11.23□□□□□ -0.61
MALAT1-210ENST00000617489 STK25O00506 426 aa11.22□□□□□ -0.61
MALAT1-210ENST00000617489 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
MALAT1-210ENST00000617489 FBXO22Q8NEZ5 403 aa11.18□□□□□ -0.62
MALAT1-210ENST00000617489 ARSIQ5FYB1 569 aa11.17□□□□□ -0.62
MALAT1-210ENST00000617489 MFRPQ9BY79 579 aa11.15□□□□□ -0.62
MALAT1-210ENST00000617489 ZNF687Q8N1G0 1237 aa11.14□□□□□ -0.63
MALAT1-210ENST00000617489 KHSRPQ92945 711 aaKnown RBP eCLIP11.1□□□□□ -0.631e-323■□□□□ 11.3
MALAT1-210ENST00000617489 RNF166Q96A37 237 aaPredicted RBP11.1□□□□□ -0.63
MALAT1-210ENST00000617489 RGL2O15211 777 aa11.09□□□□□ -0.63
MALAT1-210ENST00000617489 C2orf72A6NCS6 295 aa11.08□□□□□ -0.64
MALAT1-210ENST00000617489 MYT1LQ9UL68 1186 aa11.08□□□□□ -0.64
MALAT1-210ENST00000617489 ZNF316A6NFI3 1004 aaPredicted RBP11.07□□□□□ -0.64
MALAT1-210ENST00000617489 PKD2Q13563 968 aa11.07□□□□□ -0.64
MALAT1-210ENST00000617489 ANKRD13DQ6ZTN6 518 aa11.07□□□□□ -0.64
MALAT1-210ENST00000617489 TMC2Q8TDI7 906 aa11.06□□□□□ -0.64
MALAT1-210ENST00000617489 KIF3CO14782 793 aa11.02□□□□□ -0.65
MALAT1-210ENST00000617489 NUDT7P0C024 238 aa11.02□□□□□ -0.65
MALAT1-210ENST00000617489 PTGER2P43116 358 aa10.99□□□□□ -0.65
MALAT1-210ENST00000617489 PCDHGA4Q9Y5G9 962 aa10.98□□□□□ -0.65
MALAT1-210ENST00000617489 PPP1R37O75864 691 aa10.96□□□□□ -0.65
MALAT1-210ENST00000617489 LSM11P83369 360 aaKnown RBP eCLIP10.96□□□□□ -0.65
MALAT1-210ENST00000617489 LHX6Q9UPM6 363 aa10.96□□□□□ -0.65
MALAT1-210ENST00000617489 SLC34A2O95436 690 aa10.95□□□□□ -0.66
MALAT1-210ENST00000617489 PBX2P40425 430 aa10.92□□□□□ -0.66
MALAT1-210ENST00000617489 AXIN2Q9Y2T1 843 aa10.92□□□□□ -0.66
MALAT1-210ENST00000617489 PSDA5PKW4 1024 aaPredicted RBP10.85□□□□□ -0.67
MALAT1-210ENST00000617489 CHGAP10645 457 aaKnown RBP10.85□□□□□ -0.67
MALAT1-210ENST00000617489 PLPP6Q8IY26 295 aa10.85□□□□□ -0.67
MALAT1-210ENST00000617489 POTEEQ6S8J3 1075 aa10.84□□□□□ -0.67
MALAT1-210ENST00000617489 HS6ST3Q8IZP7 471 aa10.84□□□□□ -0.67
MALAT1-210ENST00000617489 ARHGAP33O14559 1287 aa10.83□□□□□ -0.68
MALAT1-210ENST00000617489 TBC1D12O60347 775 aa10.82□□□□□ -0.68
MALAT1-210ENST00000617489 FOXK1P85037 733 aa10.82□□□□□ -0.68
MALAT1-210ENST00000617489 PTCD2Q8WV60 388 aaKnown RBP10.82□□□□□ -0.68
MALAT1-210ENST00000617489 GPHNQ9NQX3 736 aaPredicted RBP10.81□□□□□ -0.68
MALAT1-210ENST00000617489 DSG2Q14126 1118 aa10.78□□□□□ -0.68
MALAT1-210ENST00000617489 ADGRD1Q6QNK2 874 aa10.78□□□□□ -0.68
MALAT1-210ENST00000617489 PPP4R3BQ5MIZ7 849 aa10.76□□□□□ -0.69
MALAT1-210ENST00000617489 STAC3Q96MF2 364 aa10.76□□□□□ -0.69
MALAT1-210ENST00000617489 PSEN2P49810 448 aa10.75□□□□□ -0.69
MALAT1-210ENST00000617489 HCSTQ9UBK5 93 aa10.75□□□□□ -0.69
MALAT1-210ENST00000617489 KDM4FA0A1W2PPD8 638 aa10.74□□□□□ -0.69
MALAT1-210ENST00000617489 RYDENQ9NUL5 291 aaKnown RBP10.74□□□□□ -0.69
MALAT1-210ENST00000617489 KCNH8Q96L42 1107 aa10.73□□□□□ -0.69
MALAT1-210ENST00000617489 DMRTA1Q5VZB9 504 aa10.72□□□□□ -0.69
MALAT1-210ENST00000617489 TK2O00142 265 aa10.71□□□□□ -0.69
MALAT1-210ENST00000617489 UPF1Q92900 1129 aaKnown RBP eCLIP10.71□□□□□ -0.69
MALAT1-210ENST00000617489 PLA2G2EQ9NZK7 142 aa10.7□□□□□ -0.7
MALAT1-210ENST00000617489 NKX1-1Q15270 411 aaPredicted RBP10.68□□□□□ -0.7
MALAT1-210ENST00000617489 KCNK17Q96T54 332 aa10.68□□□□□ -0.7
MALAT1-210ENST00000617489 KCTD12Q96CX2 325 aaKnown RBP10.66□□□□□ -0.7
MALAT1-210ENST00000617489 HRO43593 1189 aa10.65□□□□□ -0.7
MALAT1-210ENST00000617489 ZNF454Q8N9F8 522 aa10.65□□□□□ -0.7
MALAT1-210ENST00000617489 OXER1Q8TDS5 423 aa10.65□□□□□ -0.7
MALAT1-210ENST00000617489 PDE4AP27815 886 aa10.64□□□□□ -0.71
MALAT1-210ENST00000617489 PPP1R15BQ5SWA1 713 aa10.64□□□□□ -0.71
MALAT1-210ENST00000617489 DNAJC5Q9H3Z4 198 aa10.64□□□□□ -0.71
MALAT1-210ENST00000617489 CRISPLD2Q9H0B8 497 aa10.62□□□□□ -0.71
MALAT1-210ENST00000617489 DCAF8L2P0C7V8 631 aa10.59□□□□□ -0.71
MALAT1-210ENST00000617489 PTPN5P54829 565 aa10.58□□□□□ -0.72
MALAT1-210ENST00000617489 VPS9D1Q9Y2B5 631 aa10.58□□□□□ -0.72
MALAT1-210ENST00000617489 LARP6Q9BRS8 491 aaKnown RBP10.57□□□□□ -0.72
MALAT1-210ENST00000617489 PTPREP23469 700 aa10.56□□□□□ -0.72
MALAT1-210ENST00000617489 BCL2L12Q9HB09 334 aa10.56□□□□□ -0.72
MALAT1-210ENST00000617489 NCKAP5LQ9HCH0 1330 aa10.56□□□□□ -0.72
MALAT1-210ENST00000617489 GOLGA8CPA6NN73 597 aa10.55□□□□□ -0.72
MALAT1-210ENST00000617489 EVI5O60447 810 aa10.54□□□□□ -0.72
MALAT1-210ENST00000617489 FOSBP53539 338 aa10.54□□□□□ -0.72
MALAT1-210ENST00000617489 MAP3K9P80192 1104 aa10.54□□□□□ -0.72
MALAT1-210ENST00000617489 GTPBP6O43824 516 aaPredicted RBP10.53□□□□□ -0.72
MALAT1-210ENST00000617489 DDX27Q96GQ7 796 aaKnown RBP10.53□□□□□ -0.72
MALAT1-210ENST00000617489 ZDHHC16Q969W1 377 aa10.51□□□□□ -0.73
MALAT1-210ENST00000617489 SLC4A5Q9BY07 1137 aa10.51□□□□□ -0.73
MALAT1-210ENST00000617489 ANO8Q9HCE9 1232 aaPredicted RBP10.51□□□□□ -0.73
MALAT1-210ENST00000617489 MRPL50Q8N5N7 158 aaKnown RBP10.5□□□□□ -0.73
MALAT1-210ENST00000617489 JPH4Q96JJ6 628 aa10.5□□□□□ -0.73
MALAT1-210ENST00000617489 ZBED2Q9BTP6 218 aa10.48□□□□□ -0.73
MALAT1-210ENST00000617489 WNT2BQ93097 391 aa10.47□□□□□ -0.73
MALAT1-210ENST00000617489 ADAM33Q9BZ11 813 aa10.47□□□□□ -0.73
MALAT1-210ENST00000617489 BHMG1C9JSJ3 638 aaPredicted RBP10.45□□□□□ -0.74
MALAT1-210ENST00000617489 NBPF3Q9H094 633 aa10.45□□□□□ -0.74
MALAT1-210ENST00000617489 THSD4Q6ZMP0 1018 aa10.44□□□□□ -0.74
MALAT1-210ENST00000617489 MFSD10Q14728 455 aa10.42□□□□□ -0.74
MALAT1-210ENST00000617489 EMILIN3Q9NT22 766 aa10.41□□□□□ -0.74
MALAT1-210ENST00000617489 PCDHGA10Q9Y5H3 936 aa10.39□□□□□ -0.75
MALAT1-210ENST00000617489 PPP1R3GB7ZBB8 358 aa10.38□□□□□ -0.75
MALAT1-210ENST00000617489 TYW1BQ6NUM6 668 aa10.37□□□□□ -0.75
MALAT1-210ENST00000617489 CADPS2Q86UW7 1296 aa10.36□□□□□ -0.75
MALAT1-210ENST00000617489 FBXW7Q969H0 707 aa10.36□□□□□ -0.75
MALAT1-210ENST00000617489 PROX2Q3B8N5 592 aa10.35□□□□□ -0.75
MALAT1-210ENST00000617489 ANKK1Q8NFD2 765 aa10.35□□□□□ -0.75
MALAT1-210ENST00000617489 RABGEF1Q9UJ41 708 aa10.35□□□□□ -0.75
MALAT1-210ENST00000617489 PHF14O94880 888 aa10.34□□□□□ -0.75
MALAT1-210ENST00000617489 COL9A1P20849 921 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms