RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-231ENST00000617271 CUX2O14529 1486 aa9.37□□□□□ -0.91
PCDH15-231ENST00000617271 HIRIP3Q9BW71 556 aaPredicted RBP9.36□□□□□ -0.91
PCDH15-231ENST00000617271 TIMELESSQ9UNS1 1208 aa9.36□□□□□ -0.91
PCDH15-231ENST00000617271 CARMIL1Q5VZK9 1371 aa9.36□□□□□ -0.91
PCDH15-231ENST00000617271 PPP4R2Q9NY27 417 aa9.36□□□□□ -0.91
PCDH15-231ENST00000617271 KTN1Q86UP2 1357 aaKnown RBP9.35□□□□□ -0.91
PCDH15-231ENST00000617271 SMARCA2P51531 1590 aa9.35□□□□□ -0.91
PCDH15-231ENST00000617271 ERICH6BQ5W0A0 696 aa9.35□□□□□ -0.91
PCDH15-231ENST00000617271 GPATCH3Q96I76 525 aa9.35□□□□□ -0.91
PCDH15-231ENST00000617271 TPRNQ4KMQ1 711 aa9.35□□□□□ -0.91
PCDH15-231ENST00000617271 EID1Q9Y6B2 187 aa9.35□□□□□ -0.91
PCDH15-231ENST00000617271 SPAG9O60271 1321 aaKnown RBP9.35□□□□□ -0.91
PCDH15-231ENST00000617271 KIAA1211Q6ZU35 1233 aa9.34□□□□□ -0.91
PCDH15-231ENST00000617271 MIER1Q8N108 512 aa9.34□□□□□ -0.91
PCDH15-231ENST00000617271 DCAF11Q8TEB1 546 aa9.34□□□□□ -0.91
PCDH15-231ENST00000617271 TAOK2Q9UL54 1235 aa9.34□□□□□ -0.91
PCDH15-231ENST00000617271 PLCB2Q00722 1185 aa9.33□□□□□ -0.92
PCDH15-231ENST00000617271 CCDC34Q96HJ3 373 aa9.33□□□□□ -0.92
PCDH15-231ENST00000617271 G3V3G9 751 aa9.32□□□□□ -0.92
PCDH15-231ENST00000617271 DCAF8Q5TAQ9 597 aa9.32□□□□□ -0.92
PCDH15-231ENST00000617271 PAK3O75914 559 aaPredicted RBP9.32□□□□□ -0.92
PCDH15-231ENST00000617271 TPM4P67936 248 aa9.32□□□□□ -0.92
PCDH15-231ENST00000617271 EFCAB2Q5VUJ9 269 aa9.32□□□□□ -0.92
PCDH15-231ENST00000617271 ANKRD30AQ9BXX3 1397 aa9.32□□□□□ -0.92
PCDH15-231ENST00000617271 RGS3P49796 1198 aa9.31□□□□□ -0.92
PCDH15-231ENST00000617271 CCDC9Q9Y3X0 531 aaKnown RBP9.31□□□□□ -0.92
PCDH15-231ENST00000617271 FMN1Q68DA7 1419 aa9.31□□□□□ -0.92
PCDH15-231ENST00000617271 GGT6Q6P531 493 aa9.3□□□□□ -0.92
PCDH15-231ENST00000617271 LMOD3Q0VAK6 560 aa9.3□□□□□ -0.92
PCDH15-231ENST00000617271 SOX12O15370 315 aa9.3□□□□□ -0.92
PCDH15-231ENST00000617271 DRC7Q8IY82 874 aa9.3□□□□□ -0.92
PCDH15-231ENST00000617271 STK31Q9BXU1 1019 aa9.3□□□□□ -0.92
PCDH15-231ENST00000617271 TAF7LQ5H9L4 462 aa9.29□□□□□ -0.92
PCDH15-231ENST00000617271 SETD5Q9C0A6 1442 aa9.29□□□□□ -0.92
PCDH15-231ENST00000617271 GORABQ5T7V8 394 aa9.29□□□□□ -0.92
PCDH15-231ENST00000617271 ROCK2O75116 1388 aaKnown RBP9.29□□□□□ -0.92
PCDH15-231ENST00000617271 TERF2IPQ9NYB0 399 aa9.29□□□□□ -0.92
PCDH15-231ENST00000617271 RALBP1Q15311 655 aa9.28□□□□□ -0.92
PCDH15-231ENST00000617271 CSPP1Q1MSJ5 1256 aa9.28□□□□□ -0.92
PCDH15-231ENST00000617271 SUPT16HQ9Y5B9 1047 aaKnown RBP9.28□□□□□ -0.92
PCDH15-231ENST00000617271 STK26Q9P289 416 aa9.27□□□□□ -0.92
PCDH15-231ENST00000617271 HMMRO75330 724 aa9.27□□□□□ -0.93
PCDH15-231ENST00000617271 RSPH4AQ5TD94 716 aa9.27□□□□□ -0.93
PCDH15-231ENST00000617271 UACAQ9BZF9 1416 aa9.27□□□□□ -0.93
PCDH15-231ENST00000617271 SYAP1Q96A49 352 aaPredicted RBP9.27□□□□□ -0.93
PCDH15-231ENST00000617271 RWDD1Q9H446 243 aaPredicted RBP9.27□□□□□ -0.93
PCDH15-231ENST00000617271 MSNP26038 577 aaKnown RBP9.26□□□□□ -0.93
PCDH15-231ENST00000617271 NAP1L5Q96NT1 182 aaPredicted RBP9.26□□□□□ -0.93
PCDH15-231ENST00000617271 CCER2I3L3R5 266 aa9.26□□□□□ -0.93
PCDH15-231ENST00000617271 USP35Q9P2H5 1018 aa9.26□□□□□ -0.93
PCDH15-231ENST00000617271 NOC3LQ8WTT2 800 aaKnown RBP9.26□□□□□ -0.93
PCDH15-231ENST00000617271 CHMP4CQ96CF2 233 aa9.26□□□□□ -0.93
PCDH15-231ENST00000617271 SAFB2Q14151 953 aaKnown RBP eCLIP9.26□□□□□ -0.93
PCDH15-231ENST00000617271 GBP4Q96PP9 640 aa9.25□□□□□ -0.93
PCDH15-231ENST00000617271 NOP58Q9Y2X3 529 aaKnown RBP9.25□□□□□ -0.93
PCDH15-231ENST00000617271 ZNF330Q9Y3S2 320 aaPredicted RBP9.25□□□□□ -0.93
PCDH15-231ENST00000617271 CCDC18Q5T9S5 1454 aa9.25□□□□□ -0.93
PCDH15-231ENST00000617271 SOGA1O94964 1423 aa9.25□□□□□ -0.93
PCDH15-231ENST00000617271 PMFBP1Q8TBY8 1022 aa9.25□□□□□ -0.93
PCDH15-231ENST00000617271 NCBP3Q53F19 620 aaKnown RBP9.25□□□□□ -0.93
PCDH15-231ENST00000617271 PKD2Q13563 968 aa9.24□□□□□ -0.93
PCDH15-231ENST00000617271 HSP90B1P14625 803 aaKnown RBP9.23□□□□□ -0.93
PCDH15-231ENST00000617271 ITPRIPQ8IWB1 547 aa9.23□□□□□ -0.93
PCDH15-231ENST00000617271 CHMP3Q9Y3E7 222 aa9.23□□□□□ -0.93
PCDH15-231ENST00000617271 U2AF1L5P0DN76 240 aaPredicted RBP9.23□□□□□ -0.93
PCDH15-231ENST00000617271 U2AF1Q01081 240 aaKnown RBP eCLIP9.23□□□□□ -0.93
PCDH15-231ENST00000617271 KIF3AQ9Y496 699 aa9.23□□□□□ -0.93
PCDH15-231ENST00000617271 NGDNQ8NEJ9 315 aaKnown RBP9.22□□□□□ -0.93
PCDH15-231ENST00000617271 SIN3AQ96ST3 1273 aa9.22□□□□□ -0.93
PCDH15-231ENST00000617271 PRM3Q9NNZ6 103 aa9.22□□□□□ -0.93
PCDH15-231ENST00000617271 NUP155O75694 1391 aa9.22□□□□□ -0.93
PCDH15-231ENST00000617271 PHLDB1Q86UU1 1377 aa9.22□□□□□ -0.93
PCDH15-231ENST00000617271 VPS8Q8N3P4 1428 aa9.21□□□□□ -0.94
PCDH15-231ENST00000617271 AMPHP49418 695 aa9.21□□□□□ -0.94
PCDH15-231ENST00000617271 RASSF8Q8NHQ8 419 aa9.2□□□□□ -0.94
PCDH15-231ENST00000617271 HSPA5P11021 654 aaKnown RBP9.2□□□□□ -0.94
PCDH15-231ENST00000617271 AMOTL1Q8IY63 956 aa9.2□□□□□ -0.94
PCDH15-231ENST00000617271 CEP89Q96ST8 783 aa9.2□□□□□ -0.94
PCDH15-231ENST00000617271 GTF2E1P29083 439 aaPredicted RBP9.2□□□□□ -0.94
PCDH15-231ENST00000617271 WASHC2CQ9Y4E1 1318 aa9.2□□□□□ -0.94
PCDH15-231ENST00000617271 NOL10Q9BSC4 688 aaKnown RBP9.19□□□□□ -0.94
PCDH15-231ENST00000617271 LRRFIP1Q32MZ4 808 aaKnown RBP9.19□□□□□ -0.94
PCDH15-231ENST00000617271 MARCH6O60337 910 aa9.19□□□□□ -0.94
PCDH15-231ENST00000617271 FRAT2O75474 233 aaPredicted RBP9.18□□□□□ -0.94
PCDH15-231ENST00000617271 KIF3BO15066 747 aa9.18□□□□□ -0.94
PCDH15-231ENST00000617271 TRIM34Q9BYJ4 488 aa9.18□□□□□ -0.94
PCDH15-231ENST00000617271 C1orf141Q5JVX7 400 aa9.18□□□□□ -0.94
PCDH15-231ENST00000617271 MEX3CQ5U5Q3 659 aaKnown RBP9.17□□□□□ -0.94
PCDH15-231ENST00000617271 CTDP1Q9Y5B0 961 aaPredicted RBP9.17□□□□□ -0.94
PCDH15-231ENST00000617271 APBB1O00213 710 aa9.17□□□□□ -0.94
PCDH15-231ENST00000617271 TCERG1O14776 1098 aaKnown RBP9.17□□□□□ -0.94
PCDH15-231ENST00000617271 ABCC8Q09428 1581 aa9.17□□□□□ -0.94
PCDH15-231ENST00000617271 CECR2Q9BXF3 1484 aa9.17□□□□□ -0.94
PCDH15-231ENST00000617271 TPM2P07951 284 aa9.17□□□□□ -0.94
PCDH15-231ENST00000617271 VPS53Q5VIR6 699 aa9.16□□□□□ -0.94
PCDH15-231ENST00000617271 GOLGA6L1Q8N7Z2 621 aa9.16□□□□□ -0.94
PCDH15-231ENST00000617271 SMC4Q9NTJ3 1288 aa9.16□□□□□ -0.94
PCDH15-231ENST00000617271 A0A0U1RQG5 324 aaPredicted RBP9.16□□□□□ -0.94
PCDH15-231ENST00000617271 TRIM6-TRIM34B2RNG4 842 aa9.16□□□□□ -0.94
PCDH15-231ENST00000617271 PHF14O94880 888 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms