RNA–Protein interactions for RNA: ENST00000616683.4

RAD17-220, Transcript of RAD17 checkpoint clamp loader component, humanhuman

TSL 1 (best) BASIC

Gene RAD17, Length 3,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD17-220ENST00000616683 ZNF592Q92610 1267 aa7.37□□□□□ -1.23
RAD17-220ENST00000616683 PLCD4Q9BRC7 762 aa7.37□□□□□ -1.23
RAD17-220ENST00000616683 NPM1P06748 294 aaKnown RBP eCLIP7.36□□□□□ -1.23
RAD17-220ENST00000616683 FAM193AP78312 1265 aa7.36□□□□□ -1.23
RAD17-220ENST00000616683 PSEN1P49768 467 aa7.36□□□□□ -1.23
RAD17-220ENST00000616683 ATAD2BQ9ULI0 1458 aa7.35□□□□□ -1.23
RAD17-220ENST00000616683 PHF14O94880 888 aa7.35□□□□□ -1.23
RAD17-220ENST00000616683 IRX3P78415 501 aaPredicted RBP7.35□□□□□ -1.23
RAD17-220ENST00000616683 TMED8Q6PL24 325 aaPredicted RBP7.35□□□□□ -1.23
RAD17-220ENST00000616683 SETQ01105 290 aaPredicted RBP7.35□□□□□ -1.23
RAD17-220ENST00000616683 TPM2P07951 284 aa7.34□□□□□ -1.23
RAD17-220ENST00000616683 CLCN1P35523 988 aa7.34□□□□□ -1.23
RAD17-220ENST00000616683 NCAPD3P42695 1498 aa7.34□□□□□ -1.23
RAD17-220ENST00000616683 RRAGDQ9NQL2 400 aaPredicted RBP7.33□□□□□ -1.24
RAD17-220ENST00000616683 SLC20A2Q08357 652 aa7.33□□□□□ -1.24
RAD17-220ENST00000616683 FAM43BQ6ZT52 329 aaPredicted RBP7.33□□□□□ -1.24
RAD17-220ENST00000616683 ITGAEP38570 1179 aa7.32□□□□□ -1.24
RAD17-220ENST00000616683 PLCD3Q8N3E9 789 aa7.32□□□□□ -1.24
RAD17-220ENST00000616683 DDRGK1Q96HY6 314 aa7.32□□□□□ -1.24
RAD17-220ENST00000616683 MAP7D2Q96T17 732 aa7.32□□□□□ -1.24
RAD17-220ENST00000616683 SLC52A1Q9NWF4 448 aa7.32□□□□□ -1.24
RAD17-220ENST00000616683 ZBTB47Q9UFB7 747 aaPredicted RBP7.31□□□□□ -1.24
RAD17-220ENST00000616683 DMTNQ08495 405 aa7.31□□□□□ -1.24
RAD17-220ENST00000616683 HDAC5Q9UQL6 1122 aa7.31□□□□□ -1.24
RAD17-220ENST00000616683 TAF3Q5VWG9 929 aa7.31□□□□□ -1.24
RAD17-220ENST00000616683 PSMD1Q99460 953 aa7.31□□□□□ -1.24
RAD17-220ENST00000616683 PTMSP20962 102 aa7.3□□□□□ -1.24
RAD17-220ENST00000616683 PPP4R3BQ5MIZ7 849 aa7.3□□□□□ -1.24
RAD17-220ENST00000616683 CC2D2BQ6DHV5 1058 aa7.3□□□□□ -1.24
RAD17-220ENST00000616683 ANP32AP39687 249 aaKnown RBP7.29□□□□□ -1.24
RAD17-220ENST00000616683 CEP120Q8N960 986 aa7.29□□□□□ -1.24
RAD17-220ENST00000616683 KIF20AO95235 890 aa7.29□□□□□ -1.24
RAD17-220ENST00000616683 PNNQ9H307 717 aaKnown RBP7.29□□□□□ -1.24
RAD17-220ENST00000616683 CFAP44Q96MT7 982 aa7.29□□□□□ -1.24
RAD17-220ENST00000616683 TRIM44Q96DX7 344 aaPredicted RBP7.28□□□□□ -1.24
RAD17-220ENST00000616683 CADPSQ9ULU8 1353 aa7.27□□□□□ -1.24
RAD17-220ENST00000616683 YY1AP1Q9H869 796 aa7.27□□□□□ -1.25
RAD17-220ENST00000616683 THOC2Q8NI27 1593 aaKnown RBP7.27□□□□□ -1.25
RAD17-220ENST00000616683 DCAF11Q8TEB1 546 aa7.26□□□□□ -1.25
RAD17-220ENST00000616683 DNAJC2Q99543 621 aaKnown RBP7.26□□□□□ -1.25
RAD17-220ENST00000616683 NBPF20Q3BBV1 942 aa7.26□□□□□ -1.25
RAD17-220ENST00000616683 PRDM16Q9HAZ2 1276 aa7.26□□□□□ -1.25
RAD17-220ENST00000616683 MAFGO15525 162 aa7.26□□□□□ -1.25
RAD17-220ENST00000616683 FRAT1Q92837 279 aaPredicted RBP7.26□□□□□ -1.25
RAD17-220ENST00000616683 CHMP7Q8WUX9 453 aaPredicted RBP7.25□□□□□ -1.25
RAD17-220ENST00000616683 CARD10Q9BWT7 1032 aa7.25□□□□□ -1.25
RAD17-220ENST00000616683 VGLL3A8MV65 326 aa7.24□□□□□ -1.25
RAD17-220ENST00000616683 PATL2C9JE40 543 aaKnown RBP7.24□□□□□ -1.25
RAD17-220ENST00000616683 CERS3Q8IU89 383 aa7.24□□□□□ -1.25
RAD17-220ENST00000616683 MYCNP04198 464 aaPredicted RBP7.24□□□□□ -1.25
RAD17-220ENST00000616683 TERF1P54274 439 aa7.24□□□□□ -1.25
RAD17-220ENST00000616683 PPP4R2Q9NY27 417 aa7.24□□□□□ -1.25
RAD17-220ENST00000616683 EEA1Q15075 1411 aa7.24□□□□□ -1.25
RAD17-220ENST00000616683 SOX12O15370 315 aa7.24□□□□□ -1.25
RAD17-220ENST00000616683 GTPBP4Q9BZE4 634 aaKnown RBP7.23□□□□□ -1.25
RAD17-220ENST00000616683 GEMIN8Q9NWZ8 242 aaKnown RBP7.23□□□□□ -1.25
RAD17-220ENST00000616683 MTERF4Q7Z6M4 381 aaKnown RBP7.23□□□□□ -1.25
RAD17-220ENST00000616683 LETM1O95202 739 aaPredicted RBP7.22□□□□□ -1.25
RAD17-220ENST00000616683 EGFL6Q8IUX8 553 aa7.22□□□□□ -1.25
RAD17-220ENST00000616683 ZHX1Q9UKY1 873 aaPredicted RBP7.22□□□□□ -1.25
RAD17-220ENST00000616683 MRC2Q9UBG0 1479 aa7.22□□□□□ -1.25
RAD17-220ENST00000616683 CEP164Q9UPV0 1460 aa7.22□□□□□ -1.25
RAD17-220ENST00000616683 GOLGA6L3A6NEY3 463 aa7.21□□□□□ -1.26
RAD17-220ENST00000616683 WRNQ14191 1432 aaPredicted RBP eCLIP7.21□□□□□ -1.26
RAD17-220ENST00000616683 ANAPC15P60006 121 aa7.2□□□□□ -1.26
RAD17-220ENST00000616683 BAZ1AQ9NRL2 1556 aaPredicted RBP7.2□□□□□ -1.26
RAD17-220ENST00000616683 ZSCAN20P17040 1043 aaPredicted RBP7.2□□□□□ -1.26
RAD17-220ENST00000616683 RALBP1Q15311 655 aa7.2□□□□□ -1.26
RAD17-220ENST00000616683 NBPF11Q86T75 865 aa7.2□□□□□ -1.26
RAD17-220ENST00000616683 APPP05067 770 aa7.19□□□□□ -1.26
RAD17-220ENST00000616683 FANCD2Q9BXW9 1451 aa7.19□□□□□ -1.26
RAD17-220ENST00000616683 TNNT2P45379 298 aaPredicted RBP7.19□□□□□ -1.26
RAD17-220ENST00000616683 SMARCA4P51532 1647 aa7.19□□□□□ -1.26
RAD17-220ENST00000616683 GPATCH11Q8N954 259 aa7.19□□□□□ -1.26
RAD17-220ENST00000616683 KIF21AQ7Z4S6 1674 aa7.19□□□□□ -1.26
RAD17-220ENST00000616683 NBPF1Q3BBV0 1214 aa7.19□□□□□ -1.26
RAD17-220ENST00000616683 CCER2I3L3R5 266 aa7.18□□□□□ -1.26
RAD17-220ENST00000616683 CC2D1BQ5T0F9 858 aaKnown RBP7.18□□□□□ -1.26
RAD17-220ENST00000616683 LAMC3Q9Y6N6 1575 aa7.18□□□□□ -1.26
RAD17-220ENST00000616683 ZNF692Q9BU19 519 aaPredicted RBP7.18□□□□□ -1.26
RAD17-220ENST00000616683 SH3BP1Q9Y3L3 701 aa7.18□□□□□ -1.26
RAD17-220ENST00000616683 TTC36A6NLP5 189 aa7.17□□□□□ -1.26
RAD17-220ENST00000616683 L1TD1Q5T7N2 865 aaKnown RBP7.17□□□□□ -1.26
RAD17-220ENST00000616683 LAS1LQ9Y4W2 734 aaKnown RBP7.17□□□□□ -1.26
RAD17-220ENST00000616683 MROH2BQ7Z745 1585 aa7.17□□□□□ -1.26
RAD17-220ENST00000616683 TCERG1O14776 1098 aaKnown RBP7.17□□□□□ -1.26
RAD17-220ENST00000616683 OS9Q13438 667 aaPredicted RBP7.16□□□□□ -1.26
RAD17-220ENST00000616683 DNTTIP2Q5QJE6 756 aaKnown RBP7.16□□□□□ -1.26
RAD17-220ENST00000616683 NFKBIBQ15653 356 aa7.15□□□□□ -1.26
RAD17-220ENST00000616683 NGEFQ8N5V2 710 aa7.15□□□□□ -1.26
RAD17-220ENST00000616683 HMGXB3Q12766 1538 aa7.15□□□□□ -1.26
RAD17-220ENST00000616683 RIMBP3CA6NJZ7 1639 aa7.15□□□□□ -1.26
RAD17-220ENST00000616683 RIMBP3BA6NNM3 1639 aa7.15□□□□□ -1.26
RAD17-220ENST00000616683 RIMBP3Q9UFD9 1639 aa7.15□□□□□ -1.26
RAD17-220ENST00000616683 HSP90AB3PQ58FF7 597 aa7.14□□□□□ -1.27
RAD17-220ENST00000616683 TDRD9Q8NDG6 1382 aaKnown RBP7.14□□□□□ -1.27
RAD17-220ENST00000616683 MAPK8IP2Q13387 824 aaPredicted RBP7.14□□□□□ -1.27
RAD17-220ENST00000616683 AQRO60306 1485 aaKnown RBP eCLIP7.13□□□□□ -1.27
RAD17-220ENST00000616683 RIPK4P57078 832 aa7.12□□□□□ -1.27
RAD17-220ENST00000616683 NBPF9Q3BBW0 867 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms