RNA–Protein interactions for RNA: ENST00000616553.1

AC009090.3-201, humanhuman

BASIC

Gene AC009090.3, Length 565 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009090.3-201ENST00000616553 FAM205CA6NFA0 338 aa13.78□□□□□ -0.2
AC009090.3-201ENST00000616553 ZNF710Q8N1W2 664 aa13.78□□□□□ -0.2
AC009090.3-201ENST00000616553 MFRPQ9BY79 579 aa13.78□□□□□ -0.2
AC009090.3-201ENST00000616553 SPNS2Q8IVW8 549 aa13.76□□□□□ -0.21
AC009090.3-201ENST00000616553 RIMBP2O15034 1052 aa13.73□□□□□ -0.21
AC009090.3-201ENST00000616553 KRTAP3-3Q9BYR6 98 aa13.73□□□□□ -0.21
AC009090.3-201ENST00000616553 KRTAP3-2Q9BYR7 98 aa13.73□□□□□ -0.21
AC009090.3-201ENST00000616553 ZSWIM6Q9HCJ5 1215 aa13.72□□□□□ -0.21
AC009090.3-201ENST00000616553 MMRN1Q13201 1228 aa13.7□□□□□ -0.22
AC009090.3-201ENST00000616553 GPR153Q6NV75 609 aa13.65□□□□□ -0.22
AC009090.3-201ENST00000616553 ERBB3P21860 1342 aa13.64□□□□□ -0.23
AC009090.3-201ENST00000616553 KIF3CO14782 793 aa13.63□□□□□ -0.23
AC009090.3-201ENST00000616553 VARS2Q5ST30 1063 aaKnown RBP13.58□□□□□ -0.24
AC009090.3-201ENST00000616553 C2orf72A6NCS6 295 aa13.57□□□□□ -0.24
AC009090.3-201ENST00000616553 ARSIQ5FYB1 569 aa13.55□□□□□ -0.24
AC009090.3-201ENST00000616553 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
AC009090.3-201ENST00000616553 PPP1R37O75864 691 aa13.52□□□□□ -0.25
AC009090.3-201ENST00000616553 ZNF687Q8N1G0 1237 aa13.51□□□□□ -0.25
AC009090.3-201ENST00000616553 KHSRPQ92945 711 aaKnown RBP eCLIP13.48□□□□□ -0.25
AC009090.3-201ENST00000616553 SLC34A2O95436 690 aa13.47□□□□□ -0.25
AC009090.3-201ENST00000616553 TMC2Q8TDI7 906 aa13.47□□□□□ -0.25
AC009090.3-201ENST00000616553 ZNF316A6NFI3 1004 aaPredicted RBP13.45□□□□□ -0.26
AC009090.3-201ENST00000616553 DNAJC5Q9H3Z4 198 aa13.42□□□□□ -0.26
AC009090.3-201ENST00000616553 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.26
AC009090.3-201ENST00000616553 PCDHGA4Q9Y5G9 962 aa13.4□□□□□ -0.26
AC009090.3-201ENST00000616553 NUDT7P0C024 238 aa13.38□□□□□ -0.27
AC009090.3-201ENST00000616553 NKX1-1Q15270 411 aaPredicted RBP13.35□□□□□ -0.27
AC009090.3-201ENST00000616553 FOXK1P85037 733 aa13.34□□□□□ -0.27
AC009090.3-201ENST00000616553 GPHNQ9NQX3 736 aaPredicted RBP13.34□□□□□ -0.27
AC009090.3-201ENST00000616553 LHX6Q9UPM6 363 aa13.32□□□□□ -0.28
AC009090.3-201ENST00000616553 PTCD2Q8WV60 388 aaKnown RBP13.31□□□□□ -0.28
AC009090.3-201ENST00000616553 KDM4FA0A1W2PPD8 638 aa13.3□□□□□ -0.28
AC009090.3-201ENST00000616553 RNF166Q96A37 237 aaPredicted RBP13.3□□□□□ -0.28
AC009090.3-201ENST00000616553 MYT1LQ9UL68 1186 aa13.3□□□□□ -0.28
AC009090.3-201ENST00000616553 PBX2P40425 430 aa13.29□□□□□ -0.28
AC009090.3-201ENST00000616553 PTGER2P43116 358 aa13.29□□□□□ -0.28
AC009090.3-201ENST00000616553 LSM11P83369 360 aaKnown RBP eCLIP13.28□□□□□ -0.28
AC009090.3-201ENST00000616553 PLPP6Q8IY26 295 aa13.28□□□□□ -0.28
AC009090.3-201ENST00000616553 RYDENQ9NUL5 291 aaKnown RBP13.28□□□□□ -0.28
AC009090.3-201ENST00000616553 DSG2Q14126 1118 aa13.26□□□□□ -0.29
AC009090.3-201ENST00000616553 POTEEQ6S8J3 1075 aa13.25□□□□□ -0.29
AC009090.3-201ENST00000616553 ANKRD13DQ6ZTN6 518 aa13.25□□□□□ -0.29
AC009090.3-201ENST00000616553 PSDA5PKW4 1024 aaPredicted RBP13.23□□□□□ -0.29
AC009090.3-201ENST00000616553 CRISPLD2Q9H0B8 497 aa13.19□□□□□ -0.3
AC009090.3-201ENST00000616553 AXIN2Q9Y2T1 843 aa13.18□□□□□ -0.3
AC009090.3-201ENST00000616553 DCAF8L2P0C7V8 631 aa13.16□□□□□ -0.3
AC009090.3-201ENST00000616553 TBC1D12O60347 775 aa13.15□□□□□ -0.3
AC009090.3-201ENST00000616553 ARHGAP33O14559 1287 aa13.14□□□□□ -0.31
AC009090.3-201ENST00000616553 GTPBP6O43824 516 aaPredicted RBP13.14□□□□□ -0.31
AC009090.3-201ENST00000616553 OXER1Q8TDS5 423 aa13.14□□□□□ -0.31
AC009090.3-201ENST00000616553 NCKAP5LQ9HCH0 1330 aa13.12□□□□□ -0.31
AC009090.3-201ENST00000616553 PPP1R15BQ5SWA1 713 aa13.1□□□□□ -0.31
AC009090.3-201ENST00000616553 PPP4R3BQ5MIZ7 849 aa13.09□□□□□ -0.31
AC009090.3-201ENST00000616553 ADGRD1Q6QNK2 874 aa13.08□□□□□ -0.32
AC009090.3-201ENST00000616553 PDE4AP27815 886 aa13.07□□□□□ -0.32
AC009090.3-201ENST00000616553 TK2O00142 265 aa13.06□□□□□ -0.32
AC009090.3-201ENST00000616553 PSEN2P49810 448 aa13.04□□□□□ -0.32
AC009090.3-201ENST00000616553 DMRTA1Q5VZB9 504 aa13.04□□□□□ -0.32
AC009090.3-201ENST00000616553 UPF1Q92900 1129 aaKnown RBP eCLIP13.04□□□□□ -0.32
AC009090.3-201ENST00000616553 HRO43593 1189 aa13.01□□□□□ -0.33
AC009090.3-201ENST00000616553 MFSD10Q14728 455 aa12.99□□□□□ -0.33
AC009090.3-201ENST00000616553 LARP6Q9BRS8 491 aaKnown RBP12.98□□□□□ -0.33
AC009090.3-201ENST00000616553 DDX27Q96GQ7 796 aaKnown RBP12.97□□□□□ -0.33
AC009090.3-201ENST00000616553 ANO8Q9HCE9 1232 aaPredicted RBP12.97□□□□□ -0.33
AC009090.3-201ENST00000616553 KCNK17Q96T54 332 aa12.96□□□□□ -0.33
AC009090.3-201ENST00000616553 FOSBP53539 338 aa12.95□□□□□ -0.34
AC009090.3-201ENST00000616553 ZNF454Q8N9F8 522 aa12.95□□□□□ -0.34
AC009090.3-201ENST00000616553 BCL2L12Q9HB09 334 aa12.95□□□□□ -0.34
AC009090.3-201ENST00000616553 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
AC009090.3-201ENST00000616553 RTN4Q9NQC3 1192 aaKnown RBP12.93□□□□□ -0.34
AC009090.3-201ENST00000616553 HCSTQ9UBK5 93 aa12.93□□□□□ -0.34
AC009090.3-201ENST00000616553 EVI5O60447 810 aa12.92□□□□□ -0.34
AC009090.3-201ENST00000616553 AMER1Q5JTC6 1135 aaPredicted RBP12.91□□□□□ -0.34
AC009090.3-201ENST00000616553 JPH4Q96JJ6 628 aa12.91□□□□□ -0.34
AC009090.3-201ENST00000616553 CADPS2Q86UW7 1296 aa12.9□□□□□ -0.34
AC009090.3-201ENST00000616553 SLC4A5Q9BY07 1137 aa12.9□□□□□ -0.34
AC009090.3-201ENST00000616553 VPS9D1Q9Y2B5 631 aa12.9□□□□□ -0.34
AC009090.3-201ENST00000616553 EMILIN3Q9NT22 766 aa12.88□□□□□ -0.35
AC009090.3-201ENST00000616553 PTPREP23469 700 aa12.85□□□□□ -0.35
AC009090.3-201ENST00000616553 MAP3K9P80192 1104 aa12.85□□□□□ -0.35
AC009090.3-201ENST00000616553 ZDHHC16Q969W1 377 aa12.84□□□□□ -0.35
AC009090.3-201ENST00000616553 BBXQ8WY36 941 aaPredicted RBP12.82□□□□□ -0.36
AC009090.3-201ENST00000616553 STAC3Q96MF2 364 aa12.82□□□□□ -0.36
AC009090.3-201ENST00000616553 ADAM33Q9BZ11 813 aa12.82□□□□□ -0.36
AC009090.3-201ENST00000616553 BHMG1C9JSJ3 638 aaPredicted RBP12.81□□□□□ -0.36
AC009090.3-201ENST00000616553 KCTD12Q96CX2 325 aaKnown RBP12.81□□□□□ -0.36
AC009090.3-201ENST00000616553 ZBED2Q9BTP6 218 aa12.81□□□□□ -0.36
AC009090.3-201ENST00000616553 PLA2G2EQ9NZK7 142 aa12.81□□□□□ -0.36
AC009090.3-201ENST00000616553 CAMK2BQ13554 666 aa12.79□□□□□ -0.36
AC009090.3-201ENST00000616553 PCDHGA10Q9Y5H3 936 aa12.78□□□□□ -0.36
AC009090.3-201ENST00000616553 PPP1R3GB7ZBB8 358 aa12.72□□□□□ -0.37
AC009090.3-201ENST00000616553 PHF14O94880 888 aa12.72□□□□□ -0.37
AC009090.3-201ENST00000616553 FBXW7Q969H0 707 aa12.72□□□□□ -0.37
AC009090.3-201ENST00000616553 TYW1BQ6NUM6 668 aa12.71□□□□□ -0.37
AC009090.3-201ENST00000616553 MRPL50Q8N5N7 158 aaKnown RBP12.7□□□□□ -0.38
AC009090.3-201ENST00000616553 THSD4Q6ZMP0 1018 aa12.69□□□□□ -0.38
AC009090.3-201ENST00000616553 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
AC009090.3-201ENST00000616553 NBPF3Q9H094 633 aa12.69□□□□□ -0.38
AC009090.3-201ENST00000616553 DPYSL4O14531 572 aa12.68□□□□□ -0.38
AC009090.3-201ENST00000616553 COL9A1P20849 921 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms